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KJC3_012740-T2, KJC3_012740-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012740-T2
Unique NameKJC3_012740-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4469132..4471910-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012740-T2 ID=KJC3_012740-T2|Name=KJC3_012740-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2779bp|location=Sequence derived from alignment at ch8:4469132..4471910- (Aspergillus niger KJC3)
CTTCATCTGTCCATTCGAACATCCCTTCCCACCCTGCACTCAGCAGGATG
ATGCGTCGTGGTCACTGTTCCTAGTTTCTGCTTTGTTTTCTGACAGTACG
AGTCTGAAACCTTCTGCTGGATGTCTTTGTGGATCTTGCTGCCCAGGCAG
AGGTTCCATTACGCTCTCCTTCCAGTCCAATATGCCGGCCACTACCATGG
CCCCCCGAATTCTGGCTCCCAGCTCGGCCAGGTTCGCCACCCAATTTCCA
TACGAATGATCTCTAAGCTCGCAGTGGCGAACCAACTCAATTTTGTTGCG
CCAATCCACATTTCCTGTCCCTCTTTAGCTACGGTGTGTCGCAGACATAT
ATCCAGTCGTGTTATCACACATCCCTGTCGATCGTCTAGGCCCGTGACGG
CATCTGCTCAAACCTTCGTCTCCCCAAGGTTACTTCCAGCAGTTTCACGC
GCTGCCTCCAACGACACCCTGCCCACAATGGCAGATGATGAAGTCATGCG
AAATGGGGTTGATGGCAGTCCCAACAATGAGGTACAAAATGCCGATCCTA
AAGGTACTCTGGATGCCAGTGACTTAGGAAAAGGTTCACCCATGGATCCA
GAGTCAGACGAAGATGTACCAGTTGAGGCAGAGGAGCTTCAGGACGCTCT
CACACGGGCGCCGCCGGTCAACAGCAGCTACCTACCCCTCCCTTGGAAGG
GACGACTAGGTTATGTAAGTTTGCATCATCATTCTTTCAAACCAATCCTT
ATGCTGTATAGGCATGTCTGAATACGTATCTACGATATGCGACCCCGCCC
GTTTTCTGCTCCCGGACTTGCCGCATTGCCTCCATCCTGGAAAACAGACA
TCCACTCTCGGATCCTTCGCAGCCCCCTCATCCGACCAAAAACCGTCCTG
ATCGTGATCAGCCCGCTGATGTCGCGCGCGGTCAGGCGTATGTTGAGGCT
ATAGGCCTCACCAATGCTCGCGATCTCGTCAAAATGCTGCGCTGGAATGA
CCGCTACGGAATCAAGTTCATGCGATTGAGCAGCGAGATGTTTCCATTTG
CGAGCCACAAGGAGTACGGCTACAAGTTGGCTCCCTTTGCCTCTGAAGTA
CTGGCAGAAGCTGGTCGTGTCGTTGCCGAGCTCGGTCATCGCGTGAGCGT
TCATCCCGGTCAATTCACGCAACTGGGCTCTCCTAAGGACGAAGTAGTGG
AAAGCTCCATTCGAGATCTGGAATACCACTCGGAAATGCTCCAGTTGCTC
CAGCTGCCACCTCAACAGGATAGGGATGCTGTTATGATTCTGCACATGGG
CGGCGTCTTTGGTGACAAAGAAGCCACTCTTGACCGGTTTAGAGAGAATT
ATCGAGGCCTATCGCAGGACATCAAAAATCGGCTTGTCTTGGAGAACGAC
GATGTCAGCTGGTCGGTTCACGACCTCCTGCCCATTTGTGAAGAACTGAA
CATACCCCTGGTACTCGACTTCCACCACCACAATATCATCTTTGATTCGA
GCCAGCTCCGCGAGGGCACACTGGACATCATGTCCTTGTTTGATCGGATC
AAGGCGACATGGACCCGGAAGGGCATCACGCAGAAGATGCACTATTCTGA
GCCAGAACCATCTGCCATCACAAACCGCCAACGTCGGAAGCATAGCCCCC
GGGTCTCCACTCTTCCACCGTGCGATCCCACCATGGATCTGATGATCGAG
GCCAAGGACAAGGAGCAAGCTGTTTTCGAATTGATGCGGACATTTAAGCT
GCCGGGTCACGAACTTGTCAACGATATCATTCCTCACGTGCGTAATGACG
AAAACAGGCCACATAAGCCGCCGAGGAAGACCAAGAAGAACGGGGGTTTT
GTGGATCTGGAGGGACTGGTCCCACCTCCTCAGACTGTCCCTGAAGAAGA
AGTGGGCATGGGTGGTCCGGAGGGACGGGTCTACTGGCCTCCTGGCATGG
AGGAATGGCTTCGACCGAAGAAGATTGTTCGCACCAAAGCCATCCAGAGC
CCTCGCCGCACTCCTTCCACGAAGAAAGTAGCGGTCGAAAATGGCGATTC
TGTACCACAGGAAGAACCGGATGGAAGCGCGCTAGCTACGCCGGTGTCAA
AGAAGAAGACACCTAATGTAAAGAAACCGGTCTCCAGGAAGCGGAAAGCT
TCTCCGGCGACTACACCGTCAGCTTCAGATGAAGAAGCACCCGAAATCCC
AGAGAGGCCGACTCTTAAGCGATCCCAGAGCAGTGGTGTTCGTCGAAGCC
GACGAGCAAAGAAGGTGGACTACGCCGAAGATGAAGACTCGGTCTGATCA
AAGAAAGTACCATTGCTCTTGGCTACAACTGCGCATTTCTGTGGGTACAT
TGGTCAATTCTCCTCGGCGACTGATCGTCCTATTCCAGCTCTGCTTTCTG
AGACAGCGCATGCAATAGCAGAGCACTTCGACTGCCTCAGGTAGACCTCA
GTATGGTCCTTGCATATGACGGCTTTCTGCCAGTGCTGGTTGGCTTAGAC
AGCCGTCGACACAGCTCGGTGACATATGCTCATATATAATACCTCTGTCG
ATAGACTAGTTGTATGTACACCTTGGGATATATAGATAGACGGGGTTTGG
AATACTGCATGTTGGCTCGGGTTGCCTACTATCTGCATAATATGACGCGA
TCTGTGAATATATTGGCTGGATCGAAGCGAAGTAATCATGCTTCTGGCAA
ATGTCGACAGTGTCAGGACCTTTCCCTACTAGGTGCGTTTTTAATGACAG
AGTCCCTGCCTGCCAGCTACACACCGGGC
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Coding sequence (CDS) from alignment at ch8:4469132..4471910-

>KJC3_012740-T2 ID=KJC3_012740-T2|Name=KJC3_012740-T2|organism=Aspergillus niger KJC3|type=CDS|length=3318bp|location=Sequence derived from alignment at ch8:4469132..4471910- (Aspergillus niger KJC3)
GCATGTCTGAATACGTATCTACGATATGCGACCCCGCCCGTTTTCTGCTC
CCGGACTTGCCGCATTGCCTCCATCCTGGAAAACAGACATCCACTCTCGG
ATCCTTCGCAGCCCCCTCATCCGACCAAAAACCGTCCTGATCGTGATCAG
CCCGCTGATGTCGCGCGCGGTCAGGCGTATGTTGAGGCTATAGGCCTCAC
CAATGCTCGCGATCTCGTCAAAATGCTGCGCTGGAATGACCGCTACGGAA
TCAAGTTCATGCGATTGAGCAGCGAGATGTTTCCATTTGCGAGCCACAAG
GAGTACGGCTACAAGTTGGCTCCCTTTGCCTCTGAAGTACTGGCAGAAGC
TGGTCGTGTCGTTGCCGAGCTCGGTCATCGCGTGAGCGTTCATCCCGGTC
AATTCACGCAACTGGGCTCTCCTAAGGACGAAGTAGTGGAAAGCTCCATT
CGAGATCTGGAATACCACTCGGAAATGCTCCAGTTGCTCCAGCTGCCACC
TCAACAGGATAGGGATGCTGTTATGATTCTGCACATGGGCGGCGTCTTTG
GTGACAAAGAAGCCACTCTTGACCGGTTTAGAGAGAATTATCGAGGCCTA
TCGCAGGACATCAAAAATCGGCTTGTCTTGGAGAACGACGATGTCAGCTG
GTCGGTTCACGACCTCCTGCCCATTTGTGAAGAACTGAACATACCCCTGG
TACTCGACTTCCACCACCACAATATCATCTTTGATTCGAGCCAGCTCCGC
GAGGGCACACTGGACATCATGTCCTTGTTTGATCGGATCAAGGCGACATG
GACCCGGAAGGGCATCACGCAGAAGATGCACTATTCTGAGCCAGAACCAT
CTGCCATCACAAACCGCCAACGTCGGAAGCATAGCCCCCGGGTCTCCACT
CTTCCACCGTGCGATCCCACCATGGATCTGATGATCGAGGCCAAGGACAA
GGAGCAAGCTGTTTTCGAATTGATGCGGACATTTAAGCTGCCGGGTCACG
AACTTGTCAACGATATCATTCCTCACGTGCGTAATGACGAAAACAGGCCA
CATAAGCCGCCGAGGAAGACCAAGAAGAACGGGGGTTTTGTGGATCTGGA
GGGACTGGTCCCACCTCCTCAGACTGTCCCTGAAGAAGAAGTGGGCATGG
GTGGTCCGGAGGGACGGGTCTACTGGCCTCCTGGCATGGAGGAATGGCTT
CGACCGAAGAAGATTGTTCGCACCAAAGCCATCCAGAGCCCTCGCCGCAC
TCCTTCCACGAAGAAAGTAGCGGTCGAAAATGGCGATTCTGTACCACAGG
AAGAACCGGATGGAAGCGCGCTAGCTACGCCGGTGTCAAAGAAGAAGACA
CCTAATGTAAAGAAACCGGTCTCCAGGAAGCGGAAAGCTTCTCCGGCGAC
TACACCGTCAGCTTCAGATGAAGAAGCACCCGAAATCCCAGAGAGGCCGA
CTCTTAAGCGATCCCAGAGCAGTGGTGTTCGTCGAAGCCGACGAGCAAAG
AAGGTGGACTACGCCGAAGATGAAGACTCGGTCTGAATGGATCCAGAGTC
AGACGAAGATGTACCAGTTGAGGCAGAGGAGCTTCAGGACGCTCTCACAC
GGGCGCCGCCGGTCAACAGCAGCTACCTACCCCTCCCTTGGAAGGGACGA
CTAGGTTATGCATGTCTGAATACGTATCTACGATATGCGACCCCGCCCGT
TTTCTGCTCCCGGACTTGCCGCATTGCCTCCATCCTGGAAAACAGACATC
CACTCTCGGATCCTTCGCAGCCCCCTCATCCGACCAAAAACCGTCCTGAT
CGTGATCAGCCCGCTGATGTCGCGCGCGGTCAGGCGTATGTTGAGGCTAT
AGGCCTCACCAATGCTCGCGATCTCGTCAAAATGCTGCGCTGGAATGACC
GCTACGGAATCAAGTTCATGCGATTGAGCAGCGAGATGTTTCCATTTGCG
AGCCACAAGGAGTACGGCTACAAGTTGGCTCCCTTTGCCTCTGAAGTACT
GGCAGAAGCTGGTCGTGTCGTTGCCGAGCTCGGTCATCGCGTGAGCGTTC
ATCCCGGTCAATTCACGCAACTGGGCTCTCCTAAGGACGAAGTAGTGGAA
AGCTCCATTCGAGATCTGGAATACCACTCGGAAATGCTCCAGTTGCTCCA
GCTGCCACCTCAACAGGATAGGGATGCTGTTATGATTCTGCACATGGGCG
GCGTCTTTGGTGACAAAGAAGCCACTCTTGACCGGTTTAGAGAGAATTAT
CGAGGCCTATCGCAGGACATCAAAAATCGGCTTGTCTTGGAGAACGACGA
TGTCAGCTGGTCGGTTCACGACCTCCTGCCCATTTGTGAAGAACTGAACA
TACCCCTGGTACTCGACTTCCACCACCACAATATCATCTTTGATTCGAGC
CAGCTCCGCGAGGGCACACTGGACATCATGTCCTTGTTTGATCGGATCAA
GGCGACATGGACCCGGAAGGGCATCACGCAGAAGATGCACTATTCTGAGC
CAGAACCATCTGCCATCACAAACCGCCAACGTCGGAAGCATAGCCCCCGG
GTCTCCACTCTTCCACCGTGCGATCCCACCATGGATCTGATGATCGAGGC
CAAGGACAAGGAGCAAGCTGTTTTCGAATTGATGCGGACATTTAAGCTGC
CGGGTCACGAACTTGTCAACGATATCATTCCTCACGTGCGTAATGACGAA
AACAGGCCACATAAGCCGCCGAGGAAGACCAAGAAGAACGGGGGTTTTGT
GGATCTGGAGGGACTGGTCCCACCTCCTCAGACTGTCCCTGAAGAAGAAG
TGGGCATGGGTGGTCCGGAGGGACGGGTCTACTGGCCTCCTGGCATGGAG
GAATGGCTTCGACCGAAGAAGATTGTTCGCACCAAAGCCATCCAGAGCCC
TCGCCGCACTCCTTCCACGAAGAAAGTAGCGGTCGAAAATGGCGATTCTG
TACCACAGGAAGAACCGGATGGAAGCGCGCTAGCTACGCCGGTGTCAAAG
AAGAAGACACCTAATGTAAAGAAACCGGTCTCCAGGAAGCGGAAAGCTTC
TCCGGCGACTACACCGTCAGCTTCAGATGAAGAAGCACCCGAAATCCCAG
AGAGGCCGACTCTTAAGCGATCCCAGAGCAGTGGTGTTCGTCGAAGCCGA
CGAGCAAAGAAGGTGGACTACGCCGAAGATGAAGACTCGGTCTGAATGGA
TCCAGAGTCAGACGAAGATGTACCAGTTGAGGCAGAGGAGCTTCAGGACG
CTCTCACACGGGCGCCGCCGGTCAACAGCAGCTACCTACCCCTCCCTTGG
AAGGGACGACTAGGTTAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0009411response to UV
GO:0006289nucleotide-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS18_1KJC3_012740Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012740-T2KJC3_012740-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012740-T2.cdsKJC3_012740-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012740-T2.utr3p1KJC3_012740-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012740-T2.exon3KJC3_012740-T2.exon3Aspergillus niger KJC3exon
KJC3_012740-T2.exon2KJC3_012740-T2.exon2Aspergillus niger KJC3exon
KJC3_012740-T2.exon1KJC3_012740-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012740-T2.utr5p2KJC3_012740-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012740-T2.utr5p1KJC3_012740-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8.9
DBxrefInterPro:IPR036237
DBxrefInterPro:IPR004601
DBxrefPFAM:PF03851
Product variant 2
ProductUV-damage endonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4469132..4471910 -
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