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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4478152..4479548- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012746-T1 ID=KJC3_012746-T1|Name=KJC3_012746-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1397bp|location=Sequence derived from alignment at ch8:4478152..4479548- (Aspergillus niger KJC3)
GTCAGAGACAGCACAGCACACAATGGCGGCAGCCGTATCCCAGTCAGAGC
CTTCTGGCTCGCAGAACATCTCGGCTCTGCTCGAGACCCTCACCACGTGT
CTCAACAGCACCGGATCATCGCTCCCCAAGACGAAGCGGGATGCGCCATC
AGATGTGTCGATCGAACCGCCGCAAGATGGCATTTCGCTACTTGACACCA
AGTCAGATCTCCTCCTTTCCTACATGCAGAACCTCGTATTCTTGGTCATA
TTCCAGTTGAGGGGTCTCAAGTCATCCGCGGACAAGGACGCCGAAACGAA
CGACTCGCTTCCGGACGATATCGTAAAGAAACTCGTTGAACTACGTGTCT
ACTTGGATCGCGGTGTCCGGCCTTTGGAAGGACGGCTGAAATACCAGGTC
GACAAGGTTATCAAGGCTGCAGAGGATGCGGAGCGGGCTGAGCGCGGGGC
CGCAGCCCCCAAGAAGAGCAAGAAGGCTAAGAAGTCCGCTCGCGACGAGG
AATCTGGCTCCGACGAAGGTAGCAGCGACAGCGAGGGAGACAGTGAGGAG
GACGATGAGGATGAGGATGAGGAGGAGGATATAGATGAGATGGCATTCCG
GCCTAACGTGTCTGCCTTTTCCAAGAAGGTCGAGCCTGAGGCCAAGCAGG
ATAAGGCGACCGCGAGAGCGACAAGCGACGGCATCTACCGACCACCTCGC
ATCATGCCCACAGCCCTACCGACTACCGAAACCCGGGAGCGCAGGGAGCG
CCCGCAACGCAGGTCCAATGTCATTGATGAATTCGTTAGCGCCGAGATGT
CATCCGCACCTATGGCCGAGCCCAGTATCGGGAGTACGATCGTACGTGGT
GGACGACAGACGAAGTCCAAGAAGGATCGCGAGCGTGAGGCTGAGCGGAC
GAGATATGAAGAAACCAACTTCGTGCGTCTGGCGAAGGAGAGCAAGAAGG
ATCGGGCCAAACGTCTGCGTGCTGAGGGTCCGCGAGGCACCTTTGGCGGG
GAGGAATGGCGTGGTCTTACTGAGGGAGCAGACCGGATCACAAAGCTCAC
CCGGAGAGCCCAAGGAAGCGGCTCAGCGCTGGATCGGAGTCGGAAGCGCA
AAAATGAAGACGGACAGCGCGATGATGGGATGGGAGTGGGACAGATTTTC
GAGAAGCGTCGCAAGAAGGTGGACAGCTGGAAGCGGTGATCGACTTGTAT
ACATACTCTTTTCACATTTACGATGCATCATTGTAATTCCTTTCTTCTCA
GCGCTCTATACACATTGAATTGTTTGGATGTGACCAACCTGGGCTGATCA
CTGAGCATAAAGCAGCCCGACTGCACTGGACGCTCTTATGGCCAGAGTGA
TTTGCGATACCACAAAAGTTAATTTCATTATCACATCTTTTGCAGTG back to topCoding sequence (CDS) from alignment at ch8:4478152..4479548- >KJC3_012746-T1 ID=KJC3_012746-T1|Name=KJC3_012746-T1|organism=Aspergillus niger KJC3|type=CDS|length=1167bp|location=Sequence derived from alignment at ch8:4478152..4479548- (Aspergillus niger KJC3)
ATGGCGGCAGCCGTATCCCAGTCAGAGCCTTCTGGCTCGCAGAACATCTC
GGCTCTGCTCGAGACCCTCACCACGTGTCTCAACAGCACCGGATCATCGC
TCCCCAAGACGAAGCGGGATGCGCCATCAGATGTGTCGATCGAACCGCCG
CAAGATGGCATTTCGCTACTTGACACCAAGTCAGATCTCCTCCTTTCCTA
CATGCAGAACCTCGTATTCTTGGTCATATTCCAGTTGAGGGGTCTCAAGT
CATCCGCGGACAAGGACGCCGAAACGAACGACTCGCTTCCGGACGATATC
GTAAAGAAACTCGTTGAACTACGTGTCTACTTGGATCGCGGTGTCCGGCC
TTTGGAAGGACGGCTGAAATACCAGGTCGACAAGGTTATCAAGGCTGCAG
AGGATGCGGAGCGGGCTGAGCGCGGGGCCGCAGCCCCCAAGAAGAGCAAG
AAGGCTAAGAAGTCCGCTCGCGACGAGGAATCTGGCTCCGACGAAGGTAG
CAGCGACAGCGAGGGAGACAGTGAGGAGGACGATGAGGATGAGGATGAGG
AGGAGGATATAGATGAGATGGCATTCCGGCCTAACGTGTCTGCCTTTTCC
AAGAAGGTCGAGCCTGAGGCCAAGCAGGATAAGGCGACCGCGAGAGCGAC
AAGCGACGGCATCTACCGACCACCTCGCATCATGCCCACAGCCCTACCGA
CTACCGAAACCCGGGAGCGCAGGGAGCGCCCGCAACGCAGGTCCAATGTC
ATTGATGAATTCGTTAGCGCCGAGATGTCATCCGCACCTATGGCCGAGCC
CAGTATCGGGAGTACGATCGTACGTGGTGGACGACAGACGAAGTCCAAGA
AGGATCGCGAGCGTGAGGCTGAGCGGACGAGATATGAAGAAACCAACTTC
GTGCGTCTGGCGAAGGAGAGCAAGAAGGATCGGGCCAAACGTCTGCGTGC
TGAGGGTCCGCGAGGCACCTTTGGCGGGGAGGAATGGCGTGGTCTTACTG
AGGGAGCAGACCGGATCACAAAGCTCACCCGGAGAGCCCAAGGAAGCGGC
TCAGCGCTGGATCGGAGTCGGAAGCGCAAAAATGAAGACGGACAGCGCGA
TGATGGGATGGGAGTGGGACAGATTTTCGAGAAGCGTCGCAAGAAGGTGG
ACAGCTGGAAGCGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012746-T1.utr3p1 | KJC3_012746-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012746-T1.utr5p1 | KJC3_012746-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.9 |
| Note | BUSCO:EOG09263C4C |
| DBxref | InterPro:IPR007146 |
| DBxref | PFAM:PF04000 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4478152..4479548 - |
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