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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4505030..4506716- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012757-T1 ID=KJC3_012757-T1|Name=KJC3_012757-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1687bp|location=Sequence derived from alignment at ch8:4505030..4506716- (Aspergillus niger KJC3)
TCTCCGTGCTTCTTATCTCCTTCCTCTGAGCTGGTGGAATTTCCCCATTT
CGCTGGTACTACGGGCCCTTCAATGGCCATGCGCTGAGCTGCATCACGAA
CCAATCTGTCCAGCATGGTGCTGAACTCAATCGCTTGAACTTCCTTCAAA
CCCTCCAATAATATCCAACACCATGATCGAGTCGCTCATTAGCGTCGCGT
TCTGTCTCTCTACGGCGCTTACTATCGGCATTCTCTTGCTGCCTTCGCGG
CATGAGTCCAGCTCTGTCACTAGCCAAAATGCGGCAAATGAACCCAAGAC
GACTGTTCAGATTCTCGTGTTAGGGGATATTGGCCGTAGTCCGCGCATGC
AGTACCATGCCCTTAGTGTTGCCAGAAATGGTGGTCAGGTGGACATGATC
GGCTATCATGGTGCGCTAGAAGATGCGCCTTTGATTCTCACAAAGCTCCA
CGCTAATAAATTGCTATAGAATCCGACGTGCATCCCGAGATTTCCTCCCA
TCCGAGAATATCCATTGTCGCCCTGCCTCCGCATCCATCCTGCCTTCAGA
CAAGCAACAAGCTCCTCTTCCTGTTGTTCGGTCCGCTGAAAGTTCTTTTT
CAAATCGTCTGCTTGTTCTGGATCTTGGCATATCGTACAAAACCAGCCAA
ATGGCTTCTCGTACAGGTTGGTTATTCCACGCCTTGTCCCCAATGCATGG
TACCATCGAAGCAGCGCTAAGTCCATCCTTTGCCCGTCACAGAATCCGCC
TTCGATTCCCACGCTAGCGATCGCATCCCTCGTTTGCTTCTTGCGTCACA
CAAAGCTCCTCATTGATTGGCATAACTTCGGATACACCATCCTGGCACTC
AAACTCGGAAACTCCCATCCGCTGGTCAGATTCTCCAAATTATACGAGAA
GATATTCTGCCAGTACGCGACGGCACACTTGTGTGTAACCAATGCAATGG
CATCTGTTCTGAAAGAGGAGTTTGCCCTGAAGGCGCCCATTCTCCCGCTG
CATGACCGACCAGCCGATCATTTTCAGCCCATCCTAGACGATCGCGTACG
CCAGGACTTCCTGCGCTCGTTGTCGGAGACGGAAACTGTCCGGCCCATTA
TTGGGTCTGACAAGCTTCGAGTTCTGGTTAGTTCGACCTCTTGGACAGCG
GATGAGGACTTCTCGCTTCTCATAGAAGCTCTGTGTCGGTATTCGGACTT
GGCCGAGGCATCAAACCCCGACCTACCTTCGATTCTGGCCATCATAACGG
GAAAGGGGCCCCAGCGCGAGATGTATCTGAAACAAATTGCCGATCTGGAG
AAGAACGGTAAACTTCAAAAGGCCACCATTCGTACCGCTTGGCTAAGCAT
GGAAGACTATGCACGATTGCTGGCATCCGCCTCGCTGGGTGTCAGTCTGC
ACACCAGCAGTAGCGGGGTAGATTTGCCCATGAAAGTCGTCGACATGTTC
GGCGCTGGACTGCCCGTCGTTGGCTGGAATTGCTTCGAGGCGTGGCCGGA
GCTGGTCACTGAAGGTCGTAATGGACGAGGTTTTGGAAGCTCCGATGAAC
TTGTGGAACACCTTGTCGAACTCTTTGGAAACCAGGAAGCACTCGAAGAA
CTTCGTACTGGGGCACGAGAGGAAAGTTCTCGTCGGTGGGATGACGAGTG
GAACCCGGTAGCCGGAAAGCTGCTAGGCCTGGTATGA back to topCoding sequence (CDS) from alignment at ch8:4505030..4506716- >KJC3_012757-T1 ID=KJC3_012757-T1|Name=KJC3_012757-T1|organism=Aspergillus niger KJC3|type=CDS|length=4140bp|location=Sequence derived from alignment at ch8:4505030..4506716- (Aspergillus niger KJC3)
AATCCGCCTTCGATTCCCACGCTAGCGATCGCATCCCTCGTTTGCTTCTT
GCGTCACACAAAGCTCCTCATTGATTGGCATAACTTCGGATACACCATCC
TGGCACTCAAACTCGGAAACTCCCATCCGCTGGTCAGATTCTCCAAATTA
TACGAGAAGATATTCTGCCAGTACGCGACGGCACACTTGTGTGTAACCAA
TGCAATGGCATCTGTTCTGAAAGAGGAGTTTGCCCTGAAGGCGCCCATTC
TCCCGCTGCATGACCGACCAGCCGATCATTTTCAGCCCATCCTAGACGAT
CGCGTACGCCAGGACTTCCTGCGCTCGTTGTCGGAGACGGAAACTGTCCG
GCCCATTATTGGGTCTGACAAGCTTCGAGTTCTGGTTAGTTCGACCTCTT
GGACAGCGGATGAGGACTTCTCGCTTCTCATAGAAGCTCTGTGTCGGTAT
TCGGACTTGGCCGAGGCATCAAACCCCGACCTACCTTCGATTCTGGCCAT
CATAACGGGAAAGGGGCCCCAGCGCGAGATGTATCTGAAACAAATTGCCG
ATCTGGAGAAGAACGGTAAACTTCAAAAGGCCACCATTCGTACCGCTTGG
CTAAGCATGGAAGACTATGCACGATTGCTGGCATCCGCCTCGCTGGGTGT
CAGTCTGCACACCAGCAGTAGCGGGGTAGATTTGCCCATGAAAGTCGTCG
ACATGTTCGGCGCTGGACTGCCCGTCGTTGGCTGGAATTGCTTCGAGGCG
TGGCCGGAGCTGGTCACTGAAGGTCGTAATGGACGAGGTTTTGGAAGCTC
CGATGAACTTGTGGAACACCTTGTCGAACTCTTTGGAAACCAGGAAGCAC
TCGAAGAACTTCGTACTGGGGCACGAGAGGAAAGTTCTCGTCGGTGGGAT
GACGAGTGGAACCCGGTAGCCGGAAAGCTGCTAGGCCTGGTATGAAATCC
GACGTGCATCCCGAGATTTCCTCCCATCCGAGAATATCCATTGTCGCCCT
GCCTCCGCATCCATCCTGCCTTCAGACAAGCAACAAGCTCCTCTTCCTGT
TGTTCGGTCCGCTGAAAGTTCTTTTTCAAATCGTCTGCTTGTTCTGGATC
TTGGCATATCGTACAAAACCAGCCAAATGGCTTCTCGTACAGATGATCGA
GTCGCTCATTAGCGTCGCGTTCTGTCTCTCTACGGCGCTTACTATCGGCA
TTCTCTTGCTGCCTTCGCGGCATGAGTCCAGCTCTGTCACTAGCCAAAAT
GCGGCAAATGAACCCAAGACGACTGTTCAGATTCTCGTGTTAGGGGATAT
TGGCCGTAGTCCGCGCATGCAGTACCATGCCCTTAGTGTTGCCAGAAATG
GTGGTCAGGTGGACATGATCGGCTATCATGAATCCGCCTTCGATTCCCAC
GCTAGCGATCGCATCCCTCGTTTGCTTCTTGCGTCACACAAAGCTCCTCA
TTGATTGGCATAACTTCGGATACACCATCCTGGCACTCAAACTCGGAAAC
TCCCATCCGCTGGTCAGATTCTCCAAATTATACGAGAAGATATTCTGCCA
GTACGCGACGGCACACTTGTGTGTAACCAATGCAATGGCATCTGTTCTGA
AAGAGGAGTTTGCCCTGAAGGCGCCCATTCTCCCGCTGCATGACCGACCA
GCCGATCATTTTCAGCCCATCCTAGACGATCGCGTACGCCAGGACTTCCT
GCGCTCGTTGTCGGAGACGGAAACTGTCCGGCCCATTATTGGGTCTGACA
AGCTTCGAGTTCTGGTTAGTTCGACCTCTTGGACAGCGGATGAGGACTTC
TCGCTTCTCATAGAAGCTCTGTGTCGGTATTCGGACTTGGCCGAGGCATC
AAACCCCGACCTACCTTCGATTCTGGCCATCATAACGGGAAAGGGGCCCC
AGCGCGAGATGTATCTGAAACAAATTGCCGATCTGGAGAAGAACGGTAAA
CTTCAAAAGGCCACCATTCGTACCGCTTGGCTAAGCATGGAAGACTATGC
ACGATTGCTGGCATCCGCCTCGCTGGGTGTCAGTCTGCACACCAGCAGTA
GCGGGGTAGATTTGCCCATGAAAGTCGTCGACATGTTCGGCGCTGGACTG
CCCGTCGTTGGCTGGAATTGCTTCGAGGCGTGGCCGGAGCTGGTCACTGA
AGGTCGTAATGGACGAGGTTTTGGAAGCTCCGATGAACTTGTGGAACACC
TTGTCGAACTCTTTGGAAACCAGGAAGCACTCGAAGAACTTCGTACTGGG
GCACGAGAGGAAAGTTCTCGTCGGTGGGATGACGAGTGGAACCCGGTAGC
CGGAAAGCTGCTAGGCCTGGTATGAAATCCGACGTGCATCCCGAGATTTC
CTCCCATCCGAGAATATCCATTGTCGCCCTGCCTCCGCATCCATCCTGCC
TTCAGACAAGCAACAAGCTCCTCTTCCTGTTGTTCGGTCCGCTGAAAGTT
CTTTTTCAAATCGTCTGCTTGTTCTGGATCTTGGCATATCGTACAAAACC
AGCCAAATGGCTTCTCGTACAGATGATCGAGTCGCTCATTAGCGTCGCGT
TCTGTCTCTCTACGGCGCTTACTATCGGCATTCTCTTGCTGCCTTCGCGG
CATGAGTCCAGCTCTGTCACTAGCCAAAATGCGGCAAATGAACCCAAGAC
GACTGTTCAGATTCTCGTGTTAGGGGATATTGGCCGTAGTCCGCGCATGC
AGTACCATGCCCTTAGTGTTGCCAGAAATGGTGGTCAGGTGGACATGATC
GGCTATCATGAATCCGCCTTCGATTCCCACGCTAGCGATCGCATCCCTCG
TTTGCTTCTTGCGTCACACAAAGCTCCTCATTGATTGGCATAACTTCGGA
TACACCATCCTGGCACTCAAACTCGGAAACTCCCATCCGCTGGTCAGATT
CTCCAAATTATACGAGAAGATATTCTGCCAGTACGCGACGGCACACTTGT
GTGTAACCAATGCAATGGCATCTGTTCTGAAAGAGGAGTTTGCCCTGAAG
GCGCCCATTCTCCCGCTGCATGACCGACCAGCCGATCATTTTCAGCCCAT
CCTAGACGATCGCGTACGCCAGGACTTCCTGCGCTCGTTGTCGGAGACGG
AAACTGTCCGGCCCATTATTGGGTCTGACAAGCTTCGAGTTCTGGTTAGT
TCGACCTCTTGGACAGCGGATGAGGACTTCTCGCTTCTCATAGAAGCTCT
GTGTCGGTATTCGGACTTGGCCGAGGCATCAAACCCCGACCTACCTTCGA
TTCTGGCCATCATAACGGGAAAGGGGCCCCAGCGCGAGATGTATCTGAAA
CAAATTGCCGATCTGGAGAAGAACGGTAAACTTCAAAAGGCCACCATTCG
TACCGCTTGGCTAAGCATGGAAGACTATGCACGATTGCTGGCATCCGCCT
CGCTGGGTGTCAGTCTGCACACCAGCAGTAGCGGGGTAGATTTGCCCATG
AAAGTCGTCGACATGTTCGGCGCTGGACTGCCCGTCGTTGGCTGGAATTG
CTTCGAGGCGTGGCCGGAGCTGGTCACTGAAGGTCGTAATGGACGAGGTT
TTGGAAGCTCCGATGAACTTGTGGAACACCTTGTCGAACTCTTTGGAAAC
CAGGAAGCACTCGAAGAACTTCGTACTGGGGCACGAGAGGAAAGTTCTCG
TCGGTGGGATGACGAGTGGAACCCGGTAGCCGGAAAGCTGCTAGGCCTGG
TATGAAATCCGACGTGCATCCCGAGATTTCCTCCCATCCGAGAATATCCA
TTGTCGCCCTGCCTCCGCATCCATCCTGCCTTCAGACAAGCAACAAGCTC
CTCTTCCTGTTGTTCGGTCCGCTGAAAGTTCTTTTTCAAATCGTCTGCTT
GTTCTGGATCTTGGCATATCGTACAAAACCAGCCAAATGGCTTCTCGTAC
AGATGATCGAGTCGCTCATTAGCGTCGCGTTCTGTCTCTCTACGGCGCTT
ACTATCGGCATTCTCTTGCTGCCTTCGCGGCATGAGTCCAGCTCTGTCAC
TAGCCAAAATGCGGCAAATGAACCCAAGACGACTGTTCAGATTCTCGTGT
TAGGGGATATTGGCCGTAGTCCGCGCATGCAGTACCATGCCCTTAGTGTT
GCCAGAAATGGTGGTCAGGTGGACATGATCGGCTATCATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012757-T1.utr5p1 | KJC3_012757-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262Z2S |
| Note | CAZy:GT33 |
| DBxref | PFAM:PF13692 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4505030..4506716 - |
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