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KJC3_012760-T1, KJC3_012760-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012760-T1
Unique NameKJC3_012760-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4511510..4514082-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012760-T1 ID=KJC3_012760-T1|Name=KJC3_012760-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2573bp|location=Sequence derived from alignment at ch8:4511510..4514082- (Aspergillus niger KJC3)
TGATGATATCCGCCGGCAAATAAGCGTCCGATATGCTCCATATCAGAAAC
ACGGCTGAACTCGCAAGATATGAAAATAGTGGGTACAAGTTGAGGGGAAA
TGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTGT
AAGAAGAGACGCGTCAAGGTAAGCACCGTCCAGTTCCATATATTATCATA
TCCCGTATCTCCTGGGCTACGCCTGTGTTGATTAGCCGAAAACTGTTTAG
TTCTGGAACTATTCAATACCCGTCTAATTCACTGTCATCCTCGCAGCACT
CTTCTAACGGCTATAGTGCGATGAACGAGGCCCACCATGCTCCAATTGCA
TTAGCCGGGAGCTGGCATGTACTTATTTTAAGACCCCCGCGGCACGCAAG
GAGACTACATTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATTCGT
AGCACCCTCTGAAGCAACACTTTATGCCAACCAGCCCATCTCCCGCCATG
GATCTTCACTGCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTGATGCAC
AAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGACCA
CCACGAGTGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGAATTCC
TCATGAGCGGGATACTTGCGGTTGCATCGCTCCATATCGCGTCGACACTT
GATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCATAA
TCTTGCATTTGCACCTTTTCGCCATGCCATTGATAATCTTACTCCAGCCA
ATTGTGACGCAGTTCTTGCTCACTCGGTCATTATAACTGTTATCGGCATA
ACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAGAGCATGACTGA
AAATATCATTGTCGTTTTCGAGTTGCTACATGGTGTCAGTAAGATCTTTA
CCATCAGTCGTTCTTGGCTTCAAGGAAAGTTGTTCACTTCCCGGAGAGGC
TTCTGGGAAAATGAGCTTTCCATACTAGACAGTGAAATCGAGGCTGCACT
AGACCGATTAACGGCCCTGAACAATGACATGCTTGCTACTGACAATGCGG
AGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGTTTC
TGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGTTGC
AACAGTTGATAAAAAATTCGTCCATGCTCTGAGATGCCGTCAAACTCTCG
CGCTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGATGGG
AAAGTATGGTGGGCAAAGAATTCTGGAACAGCTCTGGTTTCGGAGCTGCT
GAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGTGGC
CACAACGTAAAATAGGACTTTGAGGTACATACATTGGATCCGTTGGTGTC
TTCTTGCCCCAGTTCTCACCGGATTTACGGCTTCTGCACGAGCTCCGAAC
CGGCAGGCTTGCAAGAGCTTCCCATGATATGCGCGCTGGTCAGCGTATGG
ATGAACACGGGTCTAACAACACAGACTAAAACACAACAAGGCCATCGCGT
ATAAATAATAGGTCTTGCAAATGACTATCTCAAAAAAATGCACAGGCGCC
TCTTCAAAGCTTTCCCATCCTCCTCAGCACCTTTTCATAAGCTTCCTTCG
TCCGTGCTGAGGCGAGCTTGTCAGAATCATGTTGACAGATCGCTAAGCTT
AGAGGACCTCCGAGCTGCTTCAGCCAGTATGATCGCCCGCAATCAAAGAC
CCAGTTGCGTGTGCCCACCTTGACAAGCTCTGCCAAGATATGCTGTGGGA
TATTTCGGTCTTGCACGAATATTATTTTTGGTAATTCATGCCGAATCTCC
TCCGGGGCGTTCTCCCTGCATATAGCCAGGATCTCGTCGAACGTATGGCT
CACATATAATTGAGATCCAATTTGAACGATCCCCTGCGTCCCCGCCGCTG
CATGCAGAAGGCACGCATTGGCGACAAAATCAACTGGGATCTCATCCAAG
ATATTTCGACCACTTGTATACCCTTCTGCGGCGTGCCATATCTGGGTACC
TCCCTGGTCCGAAAAGTATAGTGTAGAGAACTTCGTCAGGGGCGTCGAAT
CTTCGGGTCCGTACAGCGGATATGGGTGTCTGACGGCCGGTCCAAAGATG
GTCGGACGGACAAACAACACCGGGAGCGTCGGGTACCGCTTGAACGTCAA
GCGCTCCATAAGATGCTTTGCATGGGTATAAGATGAAGAGAAGGAATCCG
TATAGGGAGATTGACCAGTTGCTTGTATGGTTGCCAATTCGTCCTCTGGG
TCGTCATCTGAAATGGGGTACAGTCGCTCACCCACATAACCGTCTGGCAA
AAAGCTGTTCACATAAGCAGTGGAGATCTGGATGAACAGCCTGAGTCGAC
GAAACCGCGAAACCATCGCAGCCAGTTCTAAGGCGGGCAGACAGTTGTTC
TCTAATGCTTCGGAGATGCTCGCATCTAGCTTAATTCTCGCAGCTGCATG
TATAACCAGCGTCACCTCTTCAC
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Coding sequence (CDS) from alignment at ch8:4511510..4514082-

>KJC3_012760-T1 ID=KJC3_012760-T1|Name=KJC3_012760-T1|organism=Aspergillus niger KJC3|type=CDS|length=2352bp|location=Sequence derived from alignment at ch8:4511510..4514082- (Aspergillus niger KJC3)
TGCGATGAACGAGGCCCACCATGCTCCAATTGCATTAGCCGGGAGCTGGC
ATGTACTTATTTTAAGACCCCCGCGGCACGCAAGGAGACTACATTATCGA
CAAGTCCTGCTCCTTTGCAGTCCGCCAGATTCGTAGCACCCTCTGAAGCA
ACACTTTATGCCAACCAGCCCATCTCCCGCCATGGATCTTCACTGCCAAA
CCTTGCTTGCCTGCGGGAGCTTGAGCTGATGCACAAGTTTTCCACGGAGA
CCTATCAAAGCCTTTGCAATGAACCAACAGACCACCACGAGTGGCAGTAT
GTTATCCCTCGCAAAGCTTTGCAGCACGAATTCCTCATGAGCGGGATACT
TGCGGTTGCATCGCTCCATATCGCGTCGACACTTGATCCACCAGAAGCAC
TCTCCTATATTGACACAGCTCTGGAGTACCATAATCTTGCATTTGCACCT
TTTCGCCATGCCATTGATAATCTTACTCCAGCCAATTGTGACGCAGTTCT
TGCTCACTCGGTCATTATAACTGTTATCGGCATAACATTACCACAATCGG
CTGTTGCACGAGAAGAGAGTCAGAGCATGACTGAAAATATCATTGTCGTT
TTCGAGTTGCTACATGGTGTCAGTAAGATCTTTACCATCAGTCGTTCTTG
GCTTCAAGGAAAGTTGTTCACTTCCCGGAGAGGCTTCTGGGAAAATGAGC
TTTCCATACTAGACAGTGAAATCGAGGCTGCACTAGACCGATTAACGGCC
CTGAACAATGACATGCTTGCTACTGACAATGCGGAGCAGCATCACATTAT
CAAAGATGCAATAGCCCTTCTACGCCGTTGTTTCTGCAGATACAACCATG
CCCGAGACGCGGCTTCCATCCTCGCATGGGTTGCAACAGTTGATAAAAAA
TTCGTCCATGCTCTGAGATGCCGTCAAACTCTCGCGCTGCTAGTTCTCAT
GCACTGGGGTGCTCTCCTCCATGAGCTTGATGGGAAAGTATGGTGGGCAA
AGAATTCTGGAACAGCTCTGGTTTCGGAGCTGCTGAATGCGCTTCGTCCC
TGCGACGTGCGGTGGGAAGGGGCATTGCAGTGGCCACAACGTAAAATAGG
ACTTTGAATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTG
ACCAGTGTAAGAAGAGACGCGTCAAGTGCGATGAACGAGGCCCACCATGC
TCCAATTGCATTAGCCGGGAGCTGGCATGTACTTATTTTAAGACCCCCGC
GGCACGCAAGGAGACTACATTATCGACAAGTCCTGCTCCTTTGCAGTCCG
CCAGATTCGTAGCACCCTCTGAAGCAACACTTTATGCCAACCAGCCCATC
TCCCGCCATGGATCTTCACTGCCAAACCTTGCTTGCCTGCGGGAGCTTGA
GCTGATGCACAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAAC
CAACAGACCACCACGAGTGGCAGTATGTTATCCCTCGCAAAGCTTTGCAG
CACGAATTCCTCATGAGCGGGATACTTGCGGTTGCATCGCTCCATATCGC
GTCGACACTTGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGG
AGTACCATAATCTTGCATTTGCACCTTTTCGCCATGCCATTGATAATCTT
ACTCCAGCCAATTGTGACGCAGTTCTTGCTCACTCGGTCATTATAACTGT
TATCGGCATAACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAGA
GCATGACTGAAAATATCATTGTCGTTTTCGAGTTGCTACATGGTGTCAGT
AAGATCTTTACCATCAGTCGTTCTTGGCTTCAAGGAAAGTTGTTCACTTC
CCGGAGAGGCTTCTGGGAAAATGAGCTTTCCATACTAGACAGTGAAATCG
AGGCTGCACTAGACCGATTAACGGCCCTGAACAATGACATGCTTGCTACT
GACAATGCGGAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACG
CCGTTGTTTCTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCG
CATGGGTTGCAACAGTTGATAAAAAATTCGTCCATGCTCTGAGATGCCGT
CAAACTCTCGCGCTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGA
GCTTGATGGGAAAGTATGGTGGGCAAAGAATTCTGGAACAGCTCTGGTTT
CGGAGCTGCTGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCA
TTGCAGTGGCCACAACGTAAAATAGGACTTTGAATGCCGCCCAGAAGGAC
CCATACCAAGTCGCGCAATGGCTGTGACCAGTGTAAGAAGAGACGCGTCA
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012760KJC3_012760Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012760-T1KJC3_012760-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012760-T1.cdsKJC3_012760-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012760-T1.utr3p1KJC3_012760-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012760-T1.exon2KJC3_012760-T1.exon2Aspergillus niger KJC3exon
KJC3_012760-T1.exon1KJC3_012760-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012760-T1.utr5p1KJC3_012760-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4511510..4514082 -
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