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KJC3_012767-T1, KJC3_012767-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012767-T1
Unique NameKJC3_012767-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4529170..4531859-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012767-T1 ID=KJC3_012767-T1|Name=KJC3_012767-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2690bp|location=Sequence derived from alignment at ch8:4529170..4531859- (Aspergillus niger KJC3)
CAACACTTACATGCATCCAATAAATCACAATCACCTTGTTCCTCACTGTA
CTAGCTGCAATCACAATAACCCCGGCTTACATTTACCTAAATATCCGATC
GTACAACCCATCGCAACATACCACCACCACCAACCACCACCTTGTCAGAT
CATACGATCCCGTTACTACTACTATAACCCCTCACCACCCCCAACCAAAC
CATCACAACTAACTTACAACTATAATTATAATTACAACCCACTACCATAC
CATCCCATATCATCATCACCACCCATCAAGAAACAAAGGAACCAAATGAC
CCCCCAAACCATAGTAATCGGCACCGGCCTCGCCGGCCTAACCACCACCA
GCACCCTCCTAACGCACCACATCCCCGTGCTCCTGCTCGACCGCGCCTCC
AAACCCGGCGGCAATAGCATCAAAGCCTCCTCGGGTATAAATGCCGCTCC
GACGCGATATCAACTCGAACCGGATACCATCTCTGCATTTCAACACGACA
CTATCCTCTCCGCAGGAGTGCCGTATACCTCCGCCAGCGGGGTAGAGCGC
ACCCGCCGTGAGAAACTCATCGACACGCTCACAACCAAGTCCGCGGACGC
GCTATACTGGCTTACGGATGACATCGGGGTCGACTTGAGTCGTGTCGCTC
GACTCGGAGGACATAGTGTATCCCGGACGCATCGGGGCGCGGGGAAGGGA
ACACCAGGGTATGAGATAATCAGGGGGTTGTTGGGTCGGGTATCAGAGGA
CAAGAATTGTCGGATGGAGGTTGGGAGACGGGTTACGAGGATATTACGGG
AGGGAGGGGAAGGACGGGTAGTTGGGGTTGAGTATACGGTTACGGATGGA
GAAGAAGGGGGCAATCAAACAAAGACAGAGACAGCGTACGGACCTGTCGT
CGTTGCGAGTGGAGGGTTTGCAGGCGATGCGAGAGGGCTGTTAGCGCAGT
ATCGGCCCGATCTGGAGGGGATACCATCGACGAATGAGCAGCGCGAAGGG
ACGCAGCCTTTGCTGCAGGAGGTTGGGGCAGCGGTGGTGGATATGGAACA
GGTGCAGGTGCATCCGACGGGGTTTGTGGGGGGGAAGGAAGAAGAAGCGG
AGGCGATGGTGAAGATATTGGCGGCGGAGGCGTTGAGAGGGGAAGGGGGT
ATACTTGTGCTTGGGGACGGGAGGAGGTTTGTGAATGAATTGGAGACGAG
AGAGAAGGTGACGGGGGAGGTTATGGCACAGGCGAAGAAGTTGCCGACCA
AGGCGAGGCAGTGGGATGTGAAGCTGGTGCTGGATGAGGGAGCAGCAGCG
GCGTTACAGTCGCATTTGGAGTTTTATATGTGGAAGGGGTTGATTAAGAA
GACGACGGTTGGGAAGATGGAGGAAATGTCGGCGCTGAAGGGGACGCTGA
GGGAATATGCGGATGTAGTCGCTGGGAAGAAGCAGGATGAGTTTGGACGG
CAGTCGTTCGGAAACTGGACGCTGAGGGAGGTCAAGCCAGAGTCGGTGGT
GTATGTGGGAAAGGTTACGCCGGTTGTTCACTTTACCATGGGAGGCGTGG
TGATCAACGAGCGCAGCCAGGTGTTGGACGGTCAGGGGCAGCCGATTCCC
GGGCTCTATGCGGCCGGCGAGATTACCGGAGGCCTTCATGGCCAGAATCG
GTTGGGGGGATCGTCGCTGTTGGAGTGCGCGGTCTTTGGCCGCATTGCCG
GAGAGGAAGCGGCTGCTTATTATCAAGGATCGAAGGAGACGTGTTCCTGA
AAGTCCTTGTATGGGAATTAGTGACTGGTGGTTGTTCCAAATTGCGACAG
GCCGGATCGATTGTGATTAGTGTACTCGGTACTACTGTGTATTATGCACG
CTACAGTGATCTATGTAATAAGCTACCATTGCAGTTGTCCGATCGAATTC
GATTGTTTGTTTGGTCTCTGTATATAAAGTTCTGGGGAACTGCGCGGTTC
ATGCAACCAACTGCATCTCTTTACGATGACCTTGTTTCGGATCCAACGCC
TTACCTGATGATGATGATGATAATCATCATCAAGCAGTGTGATGAATCAA
GGCACAAGTCATGAGACATGCAATCGCACATTTGCCCAGTGCGCTCGGAT
AGAAATGATCGGTTTCATGAGTCGAACCACTGCACAATGCATGCAAACGC
ACTGTAATATCTTCGCAGTCAGCCATTTCGCACTGCGACCCCCATTCGAA
GAAAATTCTGCCAAGATTCCATGAACCCTGTCTAGATGATCATGGTCGCC
TTTAATTGCATCATGGGGCCGTTGCATAAAAACTGGGGATAATTAGATAC
CTGACATCAACGAGCAGATGAAAGAAAAGTGACGTTGGGGAAGACCAACG
CAGCCCTTGCGAGGATGCACGATGATTGATGGACGGGGACAGGCCCTGAG
CACAGGGACCCATGACGTAGGACGCCGAAGGGACGGGCTTCTCGGTCGAA
TTCCGGACAAAAAAAAACAAAACTAAAATCAAGAAAGAGAAGATGGGCTG
TTGCACCGCCACAACTCAAACACTTACTCAGTCCGACTAGGGTCGTCGCC
TCCACGGAGCGGAGTTAGTTAATCTGGTGGGCAGCCCTTCCCTTCTGCCT
GGAGTGGAAGTGATGATACAACGCACACTTCATCCCACGCAAATGCACCG
ACAGGTCTCTGTCGACTCGATGTGCTCTTCTAGAACGCTG
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Coding sequence (CDS) from alignment at ch8:4529170..4531859-

>KJC3_012767-T1 ID=KJC3_012767-T1|Name=KJC3_012767-T1|organism=Aspergillus niger KJC3|type=CDS|length=1740bp|location=Sequence derived from alignment at ch8:4529170..4531859- (Aspergillus niger KJC3)
ATGCATCCAATAAATCACAATCACCTTGTTCCTCACTGTACTAGCTGCAA
TCACAATAACCCCGGCTTACATTTACCTAAATATCCGATCGTACAACCCA
TCGCAACATACCACCACCACCAACCACCACCTTGTCAGATCATACGATCC
CGTTACTACTACTATAACCCCTCACCACCCCCAACCAAACCATCACAACT
AACTTACAACTATAATTATAATTACAACCCACTACCATACCATCCCATAT
CATCATCACCACCCATCAAGAAACAAAGGAACCAAATGACCCCCCAAACC
ATAGTAATCGGCACCGGCCTCGCCGGCCTAACCACCACCAGCACCCTCCT
AACGCACCACATCCCCGTGCTCCTGCTCGACCGCGCCTCCAAACCCGGCG
GCAATAGCATCAAAGCCTCCTCGGGTATAAATGCCGCTCCGACGCGATAT
CAACTCGAACCGGATACCATCTCTGCATTTCAACACGACACTATCCTCTC
CGCAGGAGTGCCGTATACCTCCGCCAGCGGGGTAGAGCGCACCCGCCGTG
AGAAACTCATCGACACGCTCACAACCAAGTCCGCGGACGCGCTATACTGG
CTTACGGATGACATCGGGGTCGACTTGAGTCGTGTCGCTCGACTCGGAGG
ACATAGTGTATCCCGGACGCATCGGGGCGCGGGGAAGGGAACACCAGGGT
ATGAGATAATCAGGGGGTTGTTGGGTCGGGTATCAGAGGACAAGAATTGT
CGGATGGAGGTTGGGAGACGGGTTACGAGGATATTACGGGAGGGAGGGGA
AGGACGGGTAGTTGGGGTTGAGTATACGGTTACGGATGGAGAAGAAGGGG
GCAATCAAACAAAGACAGAGACAGCGTACGGACCTGTCGTCGTTGCGAGT
GGAGGGTTTGCAGGCGATGCGAGAGGGCTGTTAGCGCAGTATCGGCCCGA
TCTGGAGGGGATACCATCGACGAATGAGCAGCGCGAAGGGACGCAGCCTT
TGCTGCAGGAGGTTGGGGCAGCGGTGGTGGATATGGAACAGGTGCAGGTG
CATCCGACGGGGTTTGTGGGGGGGAAGGAAGAAGAAGCGGAGGCGATGGT
GAAGATATTGGCGGCGGAGGCGTTGAGAGGGGAAGGGGGTATACTTGTGC
TTGGGGACGGGAGGAGGTTTGTGAATGAATTGGAGACGAGAGAGAAGGTG
ACGGGGGAGGTTATGGCACAGGCGAAGAAGTTGCCGACCAAGGCGAGGCA
GTGGGATGTGAAGCTGGTGCTGGATGAGGGAGCAGCAGCGGCGTTACAGT
CGCATTTGGAGTTTTATATGTGGAAGGGGTTGATTAAGAAGACGACGGTT
GGGAAGATGGAGGAAATGTCGGCGCTGAAGGGGACGCTGAGGGAATATGC
GGATGTAGTCGCTGGGAAGAAGCAGGATGAGTTTGGACGGCAGTCGTTCG
GAAACTGGACGCTGAGGGAGGTCAAGCCAGAGTCGGTGGTGTATGTGGGA
AAGGTTACGCCGGTTGTTCACTTTACCATGGGAGGCGTGGTGATCAACGA
GCGCAGCCAGGTGTTGGACGGTCAGGGGCAGCCGATTCCCGGGCTCTATG
CGGCCGGCGAGATTACCGGAGGCCTTCATGGCCAGAATCGGTTGGGGGGA
TCGTCGCTGTTGGAGTGCGCGGTCTTTGGCCGCATTGCCGGAGAGGAAGC
GGCTGCTTATTATCAAGGATCGAAGGAGACGTGTTCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0000104succinate dehydrogenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012767KJC3_012767Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012767-T1.cdsKJC3_012767-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012767-T1.utr3p1KJC3_012767-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012767-T1.exon1KJC3_012767-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012767-T1.utr5p1KJC3_012767-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012767-T1KJC3_012767-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR003953
DBxrefInterPro:IPR027477
DBxrefInterPro:IPR010960
DBxrefPFAM:PF13450
DBxrefPFAM:PF00890
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4529170..4531859 -
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