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KJC3_012770-T1, KJC3_012770-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012770-T1
Unique NameKJC3_012770-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4537833..4540154+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012770-T1 ID=KJC3_012770-T1|Name=KJC3_012770-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2322bp|location=Sequence derived from alignment at ch8:4537833..4540154+ (Aspergillus niger KJC3)
GGATGATATCTAGGGGAATGGTAGAGGCACGGACAGGCGCTAAGCACTCA
CAAGCATGGCCAAGCTTGAGCCATCTTCCCCCGCTCGGTGAACCGCTGGC
CTGGGCACTTTATCTACTACTGATACCTACTTGCCAAGCTTAATATGATC
ATGATAGGTATCAATAATAAGCATGCACCGACCGATGGTACGGAACTTCC
TCTTACACATTGAGTATGAAAATATTGGACACTCCACACCTCGAAGGTAA
CGACCCTGATGGTTGATACCGAGCTAGCTTTTGTTCTCCTCCATCATGAA
AAGGAGCGGATTTCGCTTTGTTGAATTGATCCTCACGGTTGACACCTAGG
CTGAATAATCGGAAATCGAGCGTTCCGTTAGGCTCGGAGTAAAGGCAACC
GGGTCCCTGATTCCCTACTCCGTACATGCTTACGGATTACCCCGCAGATG
CAGCAAAAGGATCGCGGGTCATCGGTGTGATACCCGCCGTGGTATAGTTT
TTGGTTCAGAGTCGGGTTTACCCTGGAGTCAAATCATAACGAGGGAATTC
ATACCCATTAGGTACATACACCGTCGGCTGTCCGGACGGAGAATGCTTCA
TATGCCGTCTGCGTTCTAGCGCTGTCTCAGTTCCCTACAGTCCATGCGAA
TGTCAGCCCCCCGATACCCCTGTCCGAATGGATCTGGAGATATTGTTGGT
GATTACCATTGGCAGCGATCATGGCACGAGCGGCAGGCCCTGCAGGAAAC
TAAGATTTTGGGTCGGTGACAGCCGTCGTGGTTTCTTTCCGCGTGCATGA
AGCCAGCGCTAATAGCGAGACGATGTCACATTACTGCATGATGGCGATAG
AGGCTCGATTTCAAGCAAACATTATTGGGGGAGACATATAGCCTAGGCAG
ATAAGGCAGGATAGTAGGTGGTCTTCGTGGCTCATGCGGTCATTTAAGCG
TGTTTGTCGTAATGCATCCAGAAGTTCATCGAACTTGAGCTGCGAGAGCT
CTGTTCTTCGATGGTTGTTCTTGTGGGACATGTGAGTTCGTAGATTAATC
AACCCCCTCCCCCCTTTCCCGGGGAAAATACTGAAGGCTCTTATAGTTAT
AGGGGGAACAGCTATATGCACTCAACCACTAGGTCCTTCGGCTTCCGGAT
TCCATCGAAACAATGAATGCAGAAATAGATGCACAGGTGGCAATTGAGGC
CCTCCATCGTAGGAGAGTCCAGAATCGTCTTGCACAGAGAAACCGTCGTA
TGTCCCACGCTTGTGATTCTCTGGCTTAGAAATTCCGATCCCTTTCAAAA
TGACTAATGACACTGGATATGAAGGCAAACGACAAGCTGAGCTAGAACAG
TTGCGAATGCAAAATTTGGCCAATAAACAGCAAGAACGCCCCGAGGAGAG
GCGGAATGAGGAGACTATGGCCGCCGACAACAAGTCGGGTCAAAGCTGTC
CACCAACGGTGGGAGACGGTGTGACTGATGAACAAACAAATACAACAGCG
GGGTCTGATATGTCAGTTGATTCAACTATTGGAATGCACAACTCCCCGGT
TGAACCCCTAGCGGTAATTGCACCTGACAAGTTGTCATGGCATCAAGATG
GATATGTCGGTGGAGGCTTGGATTTGAGCCCAAGCACGTTGACTGGGTAT
GATAAGATGAATGATTCAATCACAACCTTTCTCCTTGACCCGGAATTGGA
TCTGCCACGGGATAGCAGCACGCCCAAGTTAACCTCTATTAATCCCACGT
CCGCCAGCACCCCTCAAGCCCGCAGCAATCCACTTCTGCACCAGGAGAGC
GCTATACGAACCACACGATCAAAATTCGAAGTCCGCCAGAGAGTCTGTAA
GGCTCAGGCGACAAATTGCGGAGTGATTCGACATCAGTGTAAGGAAGGGC
TGCCCACTGTTCGAATGAACGTTCCCACGAACCTGTCGGCCATGATGGAG
ATATGGGACAATGGCAGCCTGCTACACAAATACAGCTCAGAAAGCCAGGG
CAAGACAGCCCTCCACATAAGTGCCGAGCGTGGCGACGTTGGAATTGTGC
AGTTTCTCCTTATTCAAGGGGTAGACGTCAATTGCGCAGACGGGTGGGGA
CGTACTGCATTGCATTATGCGGTACGAGCTGCGCATGTTGATATTGTCAC
GCAGTTGCTTGCAGCGGGCGCCGAAATCGGGGCTCGCGATCATCATGGCC
AAAGCCCACTGCATGTCGCAGTGGATGTGGGTTCCGAGGTGATCGTGCGA
CTGCTAGCAGACGAGGGCGCAGACCTCAATGCCCCCATCGATATCCCAAA
CTATATACGTGAGGGAGCGTGA
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Coding sequence (CDS) from alignment at ch8:4537833..4540154+

>KJC3_012770-T1 ID=KJC3_012770-T1|Name=KJC3_012770-T1|organism=Aspergillus niger KJC3|type=CDS|length=2166bp|location=Sequence derived from alignment at ch8:4537833..4540154+ (Aspergillus niger KJC3)
ATGAATGCAGAAATAGATGCACAGGTGGCAATTGAGGCCCTCCATCGTAG
GAGAGTCCAGAATCGTCTTGCACAGAGAAACCGTCGCAAACGACAAGCTG
AGCTAGAACAGTTGCGAATGCAAAATTTGGCCAATAAACAGCAAGAACGC
CCCGAGGAGAGGCGGAATGAGGAGACTATGGCCGCCGACAACAAGTCGGG
TCAAAGCTGTCCACCAACGGTGGGAGACGGTGTGACTGATGAACAAACAA
ATACAACAGCGGGGTCTGATATGTCAGTTGATTCAACTATTGGAATGCAC
AACTCCCCGGTTGAACCCCTAGCGGTAATTGCACCTGACAAGTTGTCATG
GCATCAAGATGGATATGTCGGTGGAGGCTTGGATTTGAGCCCAAGCACGT
TGACTGGGTATGATAAGATGAATGATTCAATCACAACCTTTCTCCTTGAC
CCGGAATTGGATCTGCCACGGGATAGCAGCACGCCCAAGTTAACCTCTAT
TAATCCCACGTCCGCCAGCACCCCTCAAGCCCGCAGCAATCCACTTCTGC
ACCAGGAGAGCGCTATACGAACCACACGATCAAAATTCGAAGTCCGCCAG
AGAGTCTGTAAGGCTCAGGCGACAAATTGCGGAGTGATTCGACATCAGTG
TAAGGAAGGGCTGCCCACTGTTCGAATGAACGTTCCCACGAACCTGTCGG
CCATGATGGAGATATGGGACAATGGCAGCCTGCTACACAAATACAGCTCA
GAAAGCCAGGGCAAGACAGCCCTCCACATAAGTGCCGAGCGTGGCGACGT
TGGAATTGTGCAGTTTCTCCTTATTCAAGGGGTAGACGTCAATTGCGCAG
ACGGGTGGGGACGTACTGCATTGCATTATGCGGTACGAGCTGCGCATGTT
GATATTGTCACGCAGTTGCTTGCAGCGGGCGCCGAAATCGGGGCTCGCGA
TCATCATGGCCAAAGCCCACTGCATGTCGCAGTGGATGTGGGTTCCGAGG
TGATCGTGCGACTGCTAGCAGACGAGGGCGCAGACCTCAATGCCCCCATC
GATATCCCAAACTATATACGTGAGGGAGCGTGAATGAATGCAGAAATAGA
TGCACAGGTGGCAATTGAGGCCCTCCATCGTAGGAGAGTCCAGAATCGTC
TTGCACAGAGAAACCGTCGCAAACGACAAGCTGAGCTAGAACAGTTGCGA
ATGCAAAATTTGGCCAATAAACAGCAAGAACGCCCCGAGGAGAGGCGGAA
TGAGGAGACTATGGCCGCCGACAACAAGTCGGGTCAAAGCTGTCCACCAA
CGGTGGGAGACGGTGTGACTGATGAACAAACAAATACAACAGCGGGGTCT
GATATGTCAGTTGATTCAACTATTGGAATGCACAACTCCCCGGTTGAACC
CCTAGCGGTAATTGCACCTGACAAGTTGTCATGGCATCAAGATGGATATG
TCGGTGGAGGCTTGGATTTGAGCCCAAGCACGTTGACTGGGTATGATAAG
ATGAATGATTCAATCACAACCTTTCTCCTTGACCCGGAATTGGATCTGCC
ACGGGATAGCAGCACGCCCAAGTTAACCTCTATTAATCCCACGTCCGCCA
GCACCCCTCAAGCCCGCAGCAATCCACTTCTGCACCAGGAGAGCGCTATA
CGAACCACACGATCAAAATTCGAAGTCCGCCAGAGAGTCTGTAAGGCTCA
GGCGACAAATTGCGGAGTGATTCGACATCAGTGTAAGGAAGGGCTGCCCA
CTGTTCGAATGAACGTTCCCACGAACCTGTCGGCCATGATGGAGATATGG
GACAATGGCAGCCTGCTACACAAATACAGCTCAGAAAGCCAGGGCAAGAC
AGCCCTCCACATAAGTGCCGAGCGTGGCGACGTTGGAATTGTGCAGTTTC
TCCTTATTCAAGGGGTAGACGTCAATTGCGCAGACGGGTGGGGACGTACT
GCATTGCATTATGCGGTACGAGCTGCGCATGTTGATATTGTCACGCAGTT
GCTTGCAGCGGGCGCCGAAATCGGGGCTCGCGATCATCATGGCCAAAGCC
CACTGCATGTCGCAGTGGATGTGGGTTCCGAGGTGATCGTGCGACTGCTA
GCAGACGAGGGCGCAGACCTCAATGCCCCCATCGATATCCCAAACTATAT
ACGTGAGGGAGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012770KJC3_012770Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012770-T1KJC3_012770-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012770-T1.utr5p1KJC3_012770-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012770-T1.utr5p2KJC3_012770-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012770-T1.utr5p3KJC3_012770-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012770-T1.exon1KJC3_012770-T1.exon1Aspergillus niger KJC3exon
KJC3_012770-T1.exon2KJC3_012770-T1.exon2Aspergillus niger KJC3exon
KJC3_012770-T1.exon3KJC3_012770-T1.exon3Aspergillus niger KJC3exon
KJC3_012770-T1.exon4KJC3_012770-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012770-T1.cdsKJC3_012770-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR004827
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4537833..4540154 +
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