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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4562014..4563993- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012783-T1 ID=KJC3_012783-T1|Name=KJC3_012783-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1980bp|location=Sequence derived from alignment at ch8:4562014..4563993- (Aspergillus niger KJC3)
ATGCTGACCTCCCCATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTC
CACACTTGACTCCGATCTTCCACCCTTCGATATCAACATATCTTCCGGAA
TTCCAATATCTACCGGTGCAGTGGAAACGGAGGAAGAAACCGATCCCAGT
ACAGCTACGCGCTTGTGAGACGTGTAGCCAACGCGACAGCTAACATGACC
TCGTCCAGCAGGCGAGATCACTCATATTTACCCCGGAGCAGACCTCGTGC
CCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCTCGTGAGGCTGGCA
CTATCTTATCGTAAGCTTCTTTGTCGCGCAGGACAGTTTTACCAAGCTCA
CTGCACTAGGATTTGCGATCATGACGCCTCGTGTACTTCCATCGCGCAAT
GTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAACGACCA
GGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGGATTA
ATGGTTTGATCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGAGGTC
GTACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGATCAATGA
AGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTGGCGG
TCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATGGTCC
AAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAGACGT
TCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCACAAGA
TTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCTTGCA
GCCGCCGCATTCTAGTAAGCCACGTCTCTCATCACCCACGATTAGAAACT
GAAAATCGCCTTAGCCGAGTACTAGTAAATTCGACACTACTGCTCTCCCC
TCCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAG
AAAATCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAACGTC
CTCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATGGACT
AAGAGCCTACACAGCAAATATCGACGACTATATTTCTGGACGCAGTCCAT
CCTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTATCAT
CTGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATATCCGA
AGTCTGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACATTTCCAC
TTTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACAGTCT
GAGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGAACATGG
CGATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGG
ACAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTT
GTCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGAT
ACTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTG
AAGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCT
TTATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCG
ATCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCA
GAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCA
AGGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACG
ACGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATG
GTGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAA
TTGAGATCCTCCCAGGCTGGTTGCAGTTAG back to topCoding sequence (CDS) from alignment at ch8:4562014..4563993- >KJC3_012783-T1 ID=KJC3_012783-T1|Name=KJC3_012783-T1|organism=Aspergillus niger KJC3|type=CDS|length=7284bp|location=Sequence derived from alignment at ch8:4562014..4563993- (Aspergillus niger KJC3)
CCGAGTACTAGTAAATTCGACACTACTGCTCTCCCCTCCGCCGCTTCCTT
TCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAGAAAATCACTTGCTC
CTTGGCACCATGAACCTAGTCAATCGCTTAAACGTCCTCAACAAACTCCC
TCTCGAGTCGGAACTCCGACAAGTGATGCATGGACTAAGAGCCTACACAG
CAAATATCGACGACTATATTTCTGGACGCAGTCCATCCTACAGTCCCCAG
GCAATGTGTGACCAGCGCAATTTAGTCCAGTATCATCTGATGAGCATAGG
GCCCATTGCCGGCACAGGACTTGGGGCTATATCCGAAGTCTGTCGACTAG
CGACAATTATCTACAGCATCGGAGTGACATTTCCACTTTCTGGCGTCCGA
GCTCCTTTTGGAACTCTGGCCATGACATTACAGTCTGAGTTAGAAAAGAA
TGATCTTCTCAACAACTGGCCGATCCTGGAACATGGCGATATCCTGTTTC
TGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGGACAGTCCCGGAAGA
GGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTTGTCTCAGAGAACGT
GCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGATACTTTGGCTAGACA
TTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTGAAGCCCACTCTCTT
CTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCTTTATCGCCTAGAGC
AAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCGATCAAAGAAGATTA
AGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCAGAAGTGGGCTGAGC
TGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCAAGGGTGCACGTGTT
CTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACGACGGAGGGTGCGAT
GTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATGGTGGCTTCAGATGC
GTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAATTGAGATCCTCCCA
GGCTGGTTGCAGTTAGGATTTGCGATCATGACGCCTCGTGTACTTCCATC
GCGCAATGTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGA
ACGACCAGGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAG
CGGATTAATGGTTTGATCTCAGCAAACATGGCTAGCCTGACATCGACCAA
AGAGGTCGTACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGA
TCAATGAAGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATC
TTGGCGGTCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGA
ATGGTCCAAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGT
TAGACGTTCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTT
CACAAGATTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGG
TCTTGCAGCCGCCGCATTCTACAGGCGAGATCACTCATATTTACCCCGGA
GCAGACCTCGTGCCCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCT
CGTGAGGCTGGCACTATCTTATCATGCTGACCTCCCCATTGGATGCATCT
CCTTTCAAAATCATGGAGAGCTCCACACTTGACTCCGATCTTCCACCCTT
CGATATCAACATATCTTCCGGAATTCCAATATCTACCGGTGCAGTGGAAA
CGGAGGAAGAAACCGATCCCACCGAGTACTAGTAAATTCGACACTACTGC
TCTCCCCTCCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCC
GAGATAGAAAATCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTT
AAACGTCCTCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGC
ATGGACTAAGAGCCTACACAGCAAATATCGACGACTATATTTCTGGACGC
AGTCCATCCTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCA
GTATCATCTGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTA
TATCCGAAGTCTGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACA
TTTCCACTTTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATT
ACAGTCTGAGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGG
AACATGGCGATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCA
GCTAGGGACAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGAT
TATGTTTGTCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTAC
AGATGATACTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTC
TGGAGTGAAGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATC
AGTCCCTTTATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCC
ACTGTCGATCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAAT
TGTGTCAGAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTT
CCAGGCAAGGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGT
GTCGACGACGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGC
AAAGATGGTGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAG
CTTGGAATTGAGATCCTCCCAGGCTGGTTGCAGTTAGGATTTGCGATCAT
GACGCCTCGTGTACTTCCATCGCGCAATGTGTCTAATCCGTATCTCCAAT
ACTGGTTTCCTATGTCACTGAACGACCAGGCGACATTTAAGGCTATCGTA
CTATCCTCTCTATCTCATGAGCGGATTAATGGTTTGATCTCAGCAAACAT
GGCTAGCCTGACATCGACCAAAGAGGTCGTACCGTATTTGAAACAATACT
ACTTGGATACGATAACTTCGATCAATGAAGCACTACACGATTCTGCTCGA
GCAACTGCTGATGCGACTATCTTGGCGGTCTTGATGATGGTCGAAAAGCC
ATTGCTTCAGGATCATAATGAATGGTCCAAGCGGTCTCCATTCCAGGCAC
CTCTCCATGGATTACAGTGGTTAGACGTTCACAGTGCTAGAGAGCCCAAT
CTGGTCCACCAGATGGGTCTTCACAAGATTATATCCTTGAGGGGTGGCCT
TGCTCAAGTCAAGACCCCCGGTCTTGCAGCCGCCGCATTCTACAGGCGAG
ATCACTCATATTTACCCCGGAGCAGACCTCGTGCCCTTAGACGTCTTCCC
GTCTTCTCTTCCACGACGGCTCGTGAGGCTGGCACTATCTTATCATGCTG
ACCTCCCCATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTCCACACT
TGACTCCGATCTTCCACCCTTCGATATCAACATATCTTCCGGAATTCCAA
TATCTACCGGTGCAGTGGAAACGGAGGAAGAAACCGATCCCACCGAGTAC
TAGTAAATTCGACACTACTGCTCTCCCCTCCGCCGCTTCCTTTCGTCGCA
CTGTCTGGCCAGAACGCATCCGAGATAGAAAATCACTTGCTCCTTGGCAC
CATGAACCTAGTCAATCGCTTAAACGTCCTCAACAAACTCCCTCTCGAGT
CGGAACTCCGACAAGTGATGCATGGACTAAGAGCCTACACAGCAAATATC
GACGACTATATTTCTGGACGCAGTCCATCCTACAGTCCCCAGGCAATGTG
TGACCAGCGCAATTTAGTCCAGTATCATCTGATGAGCATAGGGCCCATTG
CCGGCACAGGACTTGGGGCTATATCCGAAGTCTGTCGACTAGCGACAATT
ATCTACAGCATCGGAGTGACATTTCCACTTTCTGGCGTCCGAGCTCCTTT
TGGAACTCTGGCCATGACATTACAGTCTGAGTTAGAAAAGAATGATCTTC
TCAACAACTGGCCGATCCTGGAACATGGCGATATCCTGTTTCTGTGGATC
CTGATGGTGGGCGGTATAGCAGCTAGGGACAGTCCCGGAAGAGGCTGGTT
CATCGAGTGCTTGTCTGAGATTATGTTTGTCTCAGAGAACGTGCAGTGGA
GCTGCGTGAAAGAAAAGCTACAGATGATACTTTGGCTAGACATTGCTTGC
GATATGGCGGGCAGAGACGTCTGGAGTGAAGCCCACTCTCTTCTGCAAAA
TCGAGCGCAAAGGGCAAAATCAGTCCCTTTATCGCCTAGAGCAAACCAGA
AGTTGAAGGCACCTTGTGCCCACTGTCGATCAAAGAAGATTAAGTGCGAT
AAGGATGATCCTTGTCAGAATTGTGTCAGAAGTGGGCTGAGCTGCGGCTC
AGCTGGAGCCAGTGCGGCTTTCCAGGCAAGGGTGCACGTGTTCTCCATGC
GACAGAAGCCGTGTGATCTGTGTCGACGACGGAGGGTGCGATGTGATAAG
GAGAAGCCGTGCAAGCGCTGCAAAGATGGTGGCTTCAGATGCGTTTACAG
AGAAGACCAATGGGTTGAAAGCTTGGAATTGAGATCCTCCCAGGCTGGTT
GCAGTTAGGATTTGCGATCATGACGCCTCGTGTACTTCCATCGCGCAATG
TGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAACGACCAG
GCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGGATTAA
TGGTTTGATCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGAGGTCG
TACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGATCAATGAA
GCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTGGCGGT
CTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATGGTCCA
AGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAGACGTT
CACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCACAAGAT
TATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCTTGCAG
CCGCCGCATTCTACAGGCGAGATCACTCATATTTACCCCGGAGCAGACCT
CGTGCCCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCTCGTGAGGC
TGGCACTATCTTATCATGCTGACCTCCCCATTGGATGCATCTCCTTTCAA
AATCATGGAGAGCTCCACACTTGACTCCGATCTTCCACCCTTCGATATCA
ACATATCTTCCGGAATTCCAATATCTACCGGTGCAGTGGAAACGGAGGAA
GAAACCGATCCCACCGAGTACTAGTAAATTCGACACTACTGCTCTCCCCT
CCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAGA
AAATCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAACGTCC
TCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATGGACTA
AGAGCCTACACAGCAAATATCGACGACTATATTTCTGGACGCAGTCCATC
CTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTATCATC
TGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATATCCGAA
GTCTGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACATTTCCACT
TTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACAGTCTG
AGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGAACATGGC
GATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGGA
CAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTTG
TCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGATA
CTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTGA
AGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCTT
TATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCGA
TCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCAG
AAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCAA
GGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACGA
CGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATGG
TGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAAT
TGAGATCCTCCCAGGCTGGTTGCAGTTAGGATTTGCGATCATGACGCCTC
GTGTACTTCCATCGCGCAATGTGTCTAATCCGTATCTCCAATACTGGTTT
CCTATGTCACTGAACGACCAGGCGACATTTAAGGCTATCGTACTATCCTC
TCTATCTCATGAGCGGATTAATGGTTTGATCTCAGCAAACATGGCTAGCC
TGACATCGACCAAAGAGGTCGTACCGTATTTGAAACAATACTACTTGGAT
ACGATAACTTCGATCAATGAAGCACTACACGATTCTGCTCGAGCAACTGC
TGATGCGACTATCTTGGCGGTCTTGATGATGGTCGAAAAGCCATTGCTTC
AGGATCATAATGAATGGTCCAAGCGGTCTCCATTCCAGGCACCTCTCCAT
GGATTACAGTGGTTAGACGTTCACAGTGCTAGAGAGCCCAATCTGGTCCA
CCAGATGGGTCTTCACAAGATTATATCCTTGAGGGGTGGCCTTGCTCAAG
TCAAGACCCCCGGTCTTGCAGCCGCCGCATTCTACAGGCGAGATCACTCA
TATTTACCCCGGAGCAGACCTCGTGCCCTTAGACGTCTTCCCGTCTTCTC
TTCCACGACGGCTCGTGAGGCTGGCACTATCTTATCATGCTGACCTCCCC
ATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTCCACACTTGACTCCG
ATCTTCCACCCTTCGATATCAACATATCTTCCGGAATTCCAATATCTACC
GGTGCAGTGGAAACGGAGGAAGAAACCGATCCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4562014..4563993 - |
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