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KJC3_012797-T1, KJC3_012797-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012797-T1
Unique NameKJC3_012797-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4593294..4594879+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012797-T1 ID=KJC3_012797-T1|Name=KJC3_012797-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1586bp|location=Sequence derived from alignment at ch8:4593294..4594879+ (Aspergillus niger KJC3)
AATCCTAATCAGCACCATGTTAAACTCGATAGCAGTGACACAGAATAATC
CCGCATCAATGGCAATAAGCAAGCTGAACCAGCGCAAAGTACTTTCGCGT
CGGTCACACCAGAAGTCGCGGTTAGGCTGCAGCAACTGCAAACGACGACA
CATTAAGGTTTTTCGCCCCCGCCTCCTGATCCTGAATGCTTATCCAGGAA
GCGGAATGCTAACAGCCAGTCCAGTGCGATGAATTACGACCACAATGCAC
CAATTGCATGAACCACTCGGTCAATTGTGAATACTCTCCGTCAACCAGTC
TGGACATGCAACCGTTATCAGCAAGAGCCTCCCAGTCCAGTTTATCAGCA
AAGTCGGAGCGTCTCATCAATTGGATTTTCGTCCCATCTGAGTATCAAAG
CACATTGAAACCCCCAATTCCGGACTCTATCGCCAGGTCAGTTACCCCGA
CTTCAACTGGCGCTCAATCTTCTCCTTCTCCATCATCCACTCTGTCATCT
CCCTCGCCATCCTCTGCTCAACCCACTCCCACCCCTACAACATTTGACTT
TTACGACTTCACTCTTCACCACCACTACCTAACCTCAACCTGCTACACTC
TCGCCGAAGATGACGGCAGTCTTCACTTCTGGCGAGATGAAGCCCCCAAG
TTGGCAATCACGCATCCCTTTATCCTGCATCTTATCTTGGCTTTAGCTGG
CCTTCACAAAGCCAGAATCAACTCCGACCATGCACATTCACATCGTGAAG
AAAATGGCTCCCTGCTCGTAAACAGAGCAGATCATCATTCTGCCATAGGG
TTAAGTGAACTGTTGTCTCGTGTCGGTCATATCCAACCCGACAATATTCA
GGCGGTGTGGGTGGGGGCCACGATCTTGTGTTTTTTGCCTATGGCTCGGG
GTCCGCGACCGGGGGACTATCTGTTTTTTTCAGCTGGTACTGATCATGAA
AGCATGGCCGAATGGCCTTCATTGGTGCGAGGAGTGAAAACACTTTCGGG
GATTTCTGGTGATATCAAGCCTCGAGGGAAAAAGAATACCCCGTCTCCAG
TCAATGAAGGAGGCAAGGCGTTGGGAATGGACTACCAGGGACCTTTAGAG
GCCTTGCGGGAGCGGATTCTTCTGCCTGGTCAAGAACGGGAAGAAGTGAA
TGGTCGTGATCTGAGGGACTGTTATCTTAATGCGATTGATATGTTGGAGC
GGATGCTCGATGAGATGTGTGGGGAAAGGCAAGATGAGGGAGAGTGTAAC
ATTGGCAGGTTAGCGATGATCATCTACGATTGGATATGTTGCTTCGAGGA
TGGACTGGATGCCTTTCAGAGAAAGGAGCCGGTGGCATTGATACTGCTGT
CTTATTTCTTGGTTCTTATGAAATTGCATGACGGGGTGTGGTTTGCTCGG
GGATGGGCGGAGCATATCATGGGGGGTATTGAGGAGGGCTTGGATCAAGA
TGATCGTCGGTGGCTACATTGGCCGATGGGGGAGATTAGAATGCACAATG
GTGCAGGTAGCAAAGGTGGGGGAGCAGCACAATCAGATTAATGAGAGGAA
TCAGCTCTCACTCATGTTTCATTATAACAAGAGAAC
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Coding sequence (CDS) from alignment at ch8:4593294..4594879+

>KJC3_012797-T1 ID=KJC3_012797-T1|Name=KJC3_012797-T1|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch8:4593294..4594879+ (Aspergillus niger KJC3)
ATGTTAAACTCGATAGCAGTGACACAGAATAATCCCGCATCAATGGCAAT
AAGCAAGCTGAACCAGCGCAAAGTACTTTCGCGTCGGTCACACCAGAAGT
CGCGGTTAGGCTGCAGCAACTGCAAACGACGACACATTAAGTGCGATGAA
TTACGACCACAATGCACCAATTGCATGAACCACTCGGTCAATTGTGAATA
CTCTCCGTCAACCAGTCTGGACATGCAACCGTTATCAGCAAGAGCCTCCC
AGTCCAGTTTATCAGCAAAGTCGGAGCGTCTCATCAATTGGATTTTCGTC
CCATCTGAGTATCAAAGCACATTGAAACCCCCAATTCCGGACTCTATCGC
CAGGTCAGTTACCCCGACTTCAACTGGCGCTCAATCTTCTCCTTCTCCAT
CATCCACTCTGTCATCTCCCTCGCCATCCTCTGCTCAACCCACTCCCACC
CCTACAACATTTGACTTTTACGACTTCACTCTTCACCACCACTACCTAAC
CTCAACCTGCTACACTCTCGCCGAAGATGACGGCAGTCTTCACTTCTGGC
GAGATGAAGCCCCCAAGTTGGCAATCACGCATCCCTTTATCCTGCATCTT
ATCTTGGCTTTAGCTGGCCTTCACAAAGCCAGAATCAACTCCGACCATGC
ACATTCACATCGTGAAGAAAATGGCTCCCTGCTCGTAAACAGAGCAGATC
ATCATTCTGCCATAGGGTTAAGTGAACTGTTGTCTCGTGTCGGTCATATC
CAACCCGACAATATTCAGGCGGTGTGGGTGGGGGCCACGATCTTGTGTTT
TTTGCCTATGGCTCGGGGTCCGCGACCGGGGGACTATCTGTTTTTTTCAG
CTGGTACTGATCATGAAAGCATGGCCGAATGGCCTTCATTGGTGCGAGGA
GTGAAAACACTTTCGGGGATTTCTGGTGATATCAAGCCTCGAGGGAAAAA
GAATACCCCGTCTCCAGTCAATGAAGGAGGCAAGGCGTTGGGAATGGACT
ACCAGGGACCTTTAGAGGCCTTGCGGGAGCGGATTCTTCTGCCTGGTCAA
GAACGGGAAGAAGTGAATGGTCGTGATCTGAGGGACTGTTATCTTAATGC
GATTGATATGTTGGAGCGGATGCTCGATGAGATGTGTGGGGAAAGGCAAG
ATGAGGGAGAGTGTAACATTGGCAGGTTAGCGATGATCATCTACGATTGG
ATATGTTGCTTCGAGGATGGACTGGATGCCTTTCAGAGAAAGGAGCCGGT
GGCATTGATACTGCTGTCTTATTTCTTGGTTCTTATGAAATTGCATGACG
GGGTGTGGTTTGCTCGGGGATGGGCGGAGCATATCATGGGGGGTATTGAG
GAGGGCTTGGATCAAGATGATCGTCGGTGGCTACATTGGCCGATGGGGGA
GATTAGAATGCACAATGGTGCAGGTAGCAAAGGTGGGGGAGCAGCACAAT
CAGATTAAATGTTAAACTCGATAGCAGTGACACAGAATAATCCCGCATCA
ATGGCAATAAGCAAGCTGAACCAGCGCAAAGTACTTTCGCGTCGGTCACA
CCAGAAGTCGCGGTTAGGCTGCAGCAACTGCAAACGACGACACATTAAGT
GCGATGAATTACGACCACAATGCACCAATTGCATGAACCACTCGGTCAAT
TGTGAATACTCTCCGTCAACCAGTCTGGACATGCAACCGTTATCAGCAAG
AGCCTCCCAGTCCAGTTTATCAGCAAAGTCGGAGCGTCTCATCAATTGGA
TTTTCGTCCCATCTGAGTATCAAAGCACATTGAAACCCCCAATTCCGGAC
TCTATCGCCAGGTCAGTTACCCCGACTTCAACTGGCGCTCAATCTTCTCC
TTCTCCATCATCCACTCTGTCATCTCCCTCGCCATCCTCTGCTCAACCCA
CTCCCACCCCTACAACATTTGACTTTTACGACTTCACTCTTCACCACCAC
TACCTAACCTCAACCTGCTACACTCTCGCCGAAGATGACGGCAGTCTTCA
CTTCTGGCGAGATGAAGCCCCCAAGTTGGCAATCACGCATCCCTTTATCC
TGCATCTTATCTTGGCTTTAGCTGGCCTTCACAAAGCCAGAATCAACTCC
GACCATGCACATTCACATCGTGAAGAAAATGGCTCCCTGCTCGTAAACAG
AGCAGATCATCATTCTGCCATAGGGTTAAGTGAACTGTTGTCTCGTGTCG
GTCATATCCAACCCGACAATATTCAGGCGGTGTGGGTGGGGGCCACGATC
TTGTGTTTTTTGCCTATGGCTCGGGGTCCGCGACCGGGGGACTATCTGTT
TTTTTCAGCTGGTACTGATCATGAAAGCATGGCCGAATGGCCTTCATTGG
TGCGAGGAGTGAAAACACTTTCGGGGATTTCTGGTGATATCAAGCCTCGA
GGGAAAAAGAATACCCCGTCTCCAGTCAATGAAGGAGGCAAGGCGTTGGG
AATGGACTACCAGGGACCTTTAGAGGCCTTGCGGGAGCGGATTCTTCTGC
CTGGTCAAGAACGGGAAGAAGTGAATGGTCGTGATCTGAGGGACTGTTAT
CTTAATGCGATTGATATGTTGGAGCGGATGCTCGATGAGATGTGTGGGGA
AAGGCAAGATGAGGGAGAGTGTAACATTGGCAGGTTAGCGATGATCATCT
ACGATTGGATATGTTGCTTCGAGGATGGACTGGATGCCTTTCAGAGAAAG
GAGCCGGTGGCATTGATACTGCTGTCTTATTTCTTGGTTCTTATGAAATT
GCATGACGGGGTGTGGTTTGCTCGGGGATGGGCGGAGCATATCATGGGGG
GTATTGAGGAGGGCTTGGATCAAGATGATCGTCGGTGGCTACATTGGCCG
ATGGGGGAGATTAGAATGCACAATGGTGCAGGTAGCAAAGGTGGGGGAGC
AGCACAATCAGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012797KJC3_012797Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012797-T1.utr5p1KJC3_012797-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012797-T1.exon1KJC3_012797-T1.exon1Aspergillus niger KJC3exon
KJC3_012797-T1.exon2KJC3_012797-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012797-T1.cdsKJC3_012797-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012797-T1.utr3p1KJC3_012797-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012797-T1KJC3_012797-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4593294..4594879 +
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