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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4608039..4610066+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012803-T1 ID=KJC3_012803-T1|Name=KJC3_012803-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2028bp|location=Sequence derived from alignment at ch8:4608039..4610066+ (Aspergillus niger KJC3)
ATGGCGTCCAATGTCTACTGTCCGTTCTGTGGGGTGATCCTGCTGCCCGA
TCCGTATTGGGATGACCCCGGCGCCCGCCCTTGGTACGCGCAGGTTCGGG
GTATCTACTCAACCAATCCTGCCGTCGGTCACATAAAAGCTACTGGGGTA
GGAATAGTACGCGGTCGGAAAACCCTCCATGCACCACTGGACAGCAATCA
AGTCTATGGGGATGTAGCACCTGACGACCTGGATGAATGGAGGCTTTGCG
AACAATCGGATAGCCAATGGTGCTTTGGATTTCATGAGTCCTGTTGGAAA
TTGCTCATTCTCAGGCTCCAGCATGGGCGAGTCGAATCGCCATCACTAAC
TGACGTGGCAATTGCCGAAATGGTCTTCTACCAACTCTGCTGCACTCCGT
GCCTCGAAGGCTCCATCTTCCACTTCGGCCATGACTATGCGGGCGCTGCG
CAAACACATAGAATTCGCGGGCGGATACCGCCGATGGATCTGGGCTCCCA
TCGTTATGCTGACCCCTGTGTGATCTCTGTTATGGATTATCCGACTGATT
CCATTTTTGCTTACGAAAATTCGATGAGCAGTTCAGAGAAATACTTGATG
CACCATAGCTCAAGAGTAGGAGGCCTTACAGAGGTGGGGGAAAGGAGGTA
TCATGCTTTTAGCAAACTCTCAACTGAGCTGCTGCTTGAAATCTTCTCAT
ATGTACCCTTTGGACAGCTTCTCACTCTGAGACTCGTATGCCGCGACCTA
GCGGTACTCGCAGATATATCTATGCTCCCACAGTCGTATTGGCGGAGTAG
GTTCCTTCTGGGCCAGGAGGCTGACTTTGTTTTCCCCTGTCTTTCAGAAA
CACAAGACTGGTTCAAACTTTTCTTCGCTACGAGGGCATCTTTGAAAGCT
GCCACGCCACCACTAGTCAATCGAAAGAGAATCCGGGACCTACTGGAGCC
CATGGCGTCCCTTGTGGACCTAGACTCCATTTTTCGACACGGTCCCGGCG
GACTGGACTATTTTCCGGCGCCAATGCGAGGGAACGACTTCACTCTGGTT
GATATTGAAGCGGGCCCACAGCTAGCGAAGGTTTTGGGCTACTTTTCAGG
CCAGCTGGCATATAATGATGAGGACTGCCCCCTACAAGAGGGATGTCGTG
TGCTCTATCGAAAGGCACAGCCCTTCATGTTCCCGCAGGAAAAGCACAGA
AGACGAATTAGTATATCAACTGTCAAGATCGGCGCACGGCGGTTTATTTC
TGGCATCAAATTATTCCCGTCGGACGAAGACAACTGTGTTGGTCGATTGA
TTGGTTACCGCGATCCAGGTACCGAAACCTGTATAGACGTGCCGAAGAAC
CTCTTCATCAAAGCGTTTCGCGTGGCATTTTGCGCGGAAGGCTTGATGGG
GATCCAGTTACAATACGGTAACTCAGCTTCATCATGCTGGCTTGGTGATA
GCCACGGCCCAGGGATGGCTCAGGGAACACTACAGATTCCGAAAAGACCA
AGCCAGTACCACTTGCTGGCCGACCTAGACCGGTTTAAAATTGTTTCACT
TGGCCTTACTGAATCGACTGATGCCCATCAGGGGTCTTTGCATCGTTCTC
CTTCGGACGTGAAGGACTCGCTTCGCGCGCATTCCCAGTTGTGGGCTCCT
CATGCACCCATGTATGAGGGCTTGTTTGTCAGCCTTCTCTTACCGCCTGA
GCCACCCCGTGCCTTTGAACCGTTGTCGAATATGGACTTCGGTGGCCCAG
GAGGTAGATATCTGATGTCCTTGACCAGACTGGACTTTCACGTGACATCT
TACCCCCACCCTCTTATAGGCATGGGCTATCACTACGCCGACGGAAAGTC
GGTTTTCTTTGGTTCTACTGGTGGTTGTGCCATTTCGATTCCCATCAATG
GCCCAGATGGCGAACGTATCAGCGGGGTAAGCATTGTGGAAGACAATCGT
GACCTCGTTCAATCGGAAGGGCTTGGTGGGCTACAGGTCTGTGCTTCTCT
GTTCCCAAGCATCCGTGCACGACGCTAA back to topCoding sequence (CDS) from alignment at ch8:4608039..4610066+ >KJC3_012803-T1 ID=KJC3_012803-T1|Name=KJC3_012803-T1|organism=Aspergillus niger KJC3|type=CDS|length=2028bp|location=Sequence derived from alignment at ch8:4608039..4610066+ (Aspergillus niger KJC3)
ATGGCGTCCAATGTCTACTGTCCGTTCTGTGGGGTGATCCTGCTGCCCGA
TCCGTATTGGGATGACCCCGGCGCCCGCCCTTGGTACGCGCAGGTTCGGG
GTATCTACTCAACCAATCCTGCCGTCGGTCACATAAAAGCTACTGGGGTA
GGAATAGTACGCGGTCGGAAAACCCTCCATGCACCACTGGACAGCAATCA
AGTCTATGGGGATGTAGCACCTGACGACCTGGATGAATGGAGGCTTTGCG
AACAATCGGATAGCCAATGGTGCTTTGGATTTCATGAGTCCTGTTGGAAA
TTGCTCATTCTCAGGCTCCAGCATGGGCGAGTCGAATCGCCATCACTAAC
TGACGTGGCAATTGCCGAAATGGTCTTCTACCAACTCTGCTGCACTCCGT
GCCTCGAAGGCTCCATCTTCCACTTCGGCCATGACTATGCGGGCGCTGCG
CAAACACATAGAATTCGCGGGCGGATACCGCCGATGGATCTGGGCTCCCA
TCGTTATGCTGACCCCTGTGTGATCTCTGTTATGGATTATCCGACTGATT
CCATTTTTGCTTACGAAAATTCGATGAGCAGTTCAGAGAAATACTTGATG
CACCATAGCTCAAGAGTAGGAGGCCTTACAGAGGTGGGGGAAAGGAGGTA
TCATGCTTTTAGCAAACTCTCAACTGAGCTGCTGCTTGAAATCTTCTCAT
ATGTACCCTTTGGACAGCTTCTCACTCTGAGACTCGTATGCCGCGACCTA
GCGGTACTCGCAGATATATCTATGCTCCCACAGTCGTATTGGCGGAGTAG
GTTCCTTCTGGGCCAGGAGGCTGACTTTGTTTTCCCCTGTCTTTCAGAAA
CACAAGACTGGTTCAAACTTTTCTTCGCTACGAGGGCATCTTTGAAAGCT
GCCACGCCACCACTAGTCAATCGAAAGAGAATCCGGGACCTACTGGAGCC
CATGGCGTCCCTTGTGGACCTAGACTCCATTTTTCGACACGGTCCCGGCG
GACTGGACTATTTTCCGGCGCCAATGCGAGGGAACGACTTCACTCTGGTT
GATATTGAAGCGGGCCCACAGCTAGCGAAGGTTTTGGGCTACTTTTCAGG
CCAGCTGGCATATAATGATGAGGACTGCCCCCTACAAGAGGGATGTCGTG
TGCTCTATCGAAAGGCACAGCCCTTCATGTTCCCGCAGGAAAAGCACAGA
AGACGAATTAGTATATCAACTGTCAAGATCGGCGCACGGCGGTTTATTTC
TGGCATCAAATTATTCCCGTCGGACGAAGACAACTGTGTTGGTCGATTGA
TTGGTTACCGCGATCCAGGTACCGAAACCTGTATAGACGTGCCGAAGAAC
CTCTTCATCAAAGCGTTTCGCGTGGCATTTTGCGCGGAAGGCTTGATGGG
GATCCAGTTACAATACGGTAACTCAGCTTCATCATGCTGGCTTGGTGATA
GCCACGGCCCAGGGATGGCTCAGGGAACACTACAGATTCCGAAAAGACCA
AGCCAGTACCACTTGCTGGCCGACCTAGACCGGTTTAAAATTGTTTCACT
TGGCCTTACTGAATCGACTGATGCCCATCAGGGGTCTTTGCATCGTTCTC
CTTCGGACGTGAAGGACTCGCTTCGCGCGCATTCCCAGTTGTGGGCTCCT
CATGCACCCATGTATGAGGGCTTGTTTGTCAGCCTTCTCTTACCGCCTGA
GCCACCCCGTGCCTTTGAACCGTTGTCGAATATGGACTTCGGTGGCCCAG
GAGGTAGATATCTGATGTCCTTGACCAGACTGGACTTTCACGTGACATCT
TACCCCCACCCTCTTATAGGCATGGGCTATCACTACGCCGACGGAAAGTC
GGTTTTCTTTGGTTCTACTGGTGGTTGTGCCATTTCGATTCCCATCAATG
GCCCAGATGGCGAACGTATCAGCGGGGTAAGCATTGTGGAAGACAATCGT
GACCTCGTTCAATCGGAAGGGCTTGGTGGGCTACAGGTCTGTGCTTCTCT
GTTCCCAAGCATCCGTGCACGACGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4608039..4610066 + |
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