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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4621462..4623652- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012808-T1 ID=KJC3_012808-T1|Name=KJC3_012808-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2191bp|location=Sequence derived from alignment at ch8:4621462..4623652- (Aspergillus niger KJC3) GTCAAGTCAATTTAAGACCTGGATCCCGTCCTTTTGGCCGACGCTTTTCC
CTCCTCCCCCCCGTGAGACTTTCTTTTCCCCGTAGCTCTCTCCCTCAAGT
GACACGGTGGTAGAGCCTGAAATCCGACAAGATGGCGGCAGAAAGCGTCG
CCGAACAGCGGGATGAGAAGCCTCAGAGCGAGAAGGTGGACATCCACCAG
TCTGAGGTTCTGGACAACCCAGATCTTATGCATGAAGCCTTTGATGGTGA
GAATTACGAGCATCAGATGGGTGTCTGGGAGGCTGCTAAGCAGTACCCTT
GGGCTTGTTTCTGGGCGTTCCTCATGTGCTTTACCATTGTGAGTCTCTTC
CACATTCGCCCAAACTATTCGCAATGCTGATATAGTAACACCCCCAGGTC
ATGGAATCCTTCGACATGTTCCTCAACACTAATTTCGTCGCACTTGATCA
CTTCTCCAAGGTCTTCGGCGTCGAAACCTCACCGGGTGTCTATGCGATCC
CGACCAAATGGCAGAGTGCTCTCTTCCAGTCTGGTCAATGCGGTGCCTTC
GTGGGTGTATATCTGGCGGGACCCATCACCAACAAGATCGGATACCGCTG
GACGACTATGCTGGGTCTGGTTCTCATGAACGCGACGATTTTCATCTCAT
TCTTCGTAAGTGACTTGCTTACATCAGTGTCACTTCCACCTCACCTAATA
CCTTCCTGCATAGGCAAACTCCCTCACTCTCCTCGTGGTCGGCCAAGCCC
TAGAAGGTGTCCCATGGGGTTTCTTCATCGCCAACTCCCCAGCCTACGCC
AGTGAAGTTGTCCCTCTCCCCCTCCGCGCTGCAGTCACCGCGACCCTGCA
AATGAGTTGGTCCATTGGTTCCATCATTGTCGCGGGTGCTACATATGGCT
ACAACTCTCTCGAGACGCAATGGGAATGGCGCGCACCACTTGCCCTGCAG
TGGATCTTTCCGGTACACTCCCTTCCACCCTCCTTCAATGCCTAATACAC
AACAACCCACTAACAATCAACGAACTTTAGACTCCTCTCATGGTCCTCCT
CTTCTTCGCCCCCGAATCCCCCTGGTGGCTCATCCGCCGCGGCCGCAAAG
AAGAAGCCTTGAAATCCATCAGGCGCCTCGGCGCCAAAACCGAAGAACAG
GCCCACCAATCACTCGCCATGATCGAACGTACAGTCAAGATCGAGGAGGA
AACAGGCGGTAACCCCACACTTCTCGACCTCTGGAAAGGTACCGATCGCA
GACGAACAATCATTACCTGCCTGATCTATGCGTCGCAGAACTTTGCGGGT
AACTTGATCGCGAACCAGGCTACATACTTTTTCGAGCGTGAGTTCCCATC
CCACATTGTTAACGGTCCCTATCGTCAAAGTCTCTCTGAAACTAATATGT
AACCAGAGGCCGGCATCTCCCCCGACAAATCCTTCCAACTGAACCTCATT
ACAACCTGTCTCCAGTTCGTCGCAAACGCCGTCTCCTGGGTTTTGACCTC
ATGGTTCCGCCGCCGCACCGTCTTCCTCTACGGCACCGCCACAAACATCA
CCTTCCTCTTCATCCTCGGAATCATCGCCTCCGTACCACAGAACCACAAG
ACGAACTACGCGCAGGCCTGTCTCGGCGTCATCATCTCAGTCGTTTATGC
TGGCGCACAAGGCCCCATCTCGTACACCATCATCTCCGAGACCTCGTCGG
TGCGACTCCGCGCGCTGAGCACAGCTGTGGGACGGTCCGCGTACTACATT
ACTGAAATCCCGATGATTTATCTGTCGTCCCGGATGCTGAATACCACGGG
ATGGAACTTGGCCGGCAAGTGCGGGTATGTCTGGGGATGTACGGCTCTGG
TGGTGTGGGTTGGAGCGTACTTCGGATTGCCTGAATTGAAGCATCGGTCG
TATCGCGAGGCGGATATTCTGTTTAAGAGAAAGATTTCTGCGAGAAAGTT
CAAGACGACGGAGATTGGGGTCGATGAAAACGAGTAGTGGGTTGGTTTGG
GGCGTTGTGGGGTGGAAGGTGAGGGGGTGGTTGTAGTATGGGGCATGCTT
TTGAGATTGGTAGTATAATAGTGAATTATGGAGTTCATTGGGATCATCTT
GGTCTTCTTCTGGGTTGCTGGGTATGTTGATGCCCATGTAGGCGGTAGAT
GAGTGCTGTCAGCGGCCGCTGGTTGACGCGATTGTACGCGC back to topCoding sequence (CDS) from alignment at ch8:4621462..4623652- >KJC3_012808-T1 ID=KJC3_012808-T1|Name=KJC3_012808-T1|organism=Aspergillus niger KJC3|type=CDS|length=8010bp|location=Sequence derived from alignment at ch8:4621462..4623652- (Aspergillus niger KJC3) AGGCCGGCATCTCCCCCGACAAATCCTTCCAACTGAACCTCATTACAACC TGTCTCCAGTTCGTCGCAAACGCCGTCTCCTGGGTTTTGACCTCATGGTT CCGCCGCCGCACCGTCTTCCTCTACGGCACCGCCACAAACATCACCTTCC TCTTCATCCTCGGAATCATCGCCTCCGTACCACAGAACCACAAGACGAAC TACGCGCAGGCCTGTCTCGGCGTCATCATCTCAGTCGTTTATGCTGGCGC ACAAGGCCCCATCTCGTACACCATCATCTCCGAGACCTCGTCGGTGCGAC TCCGCGCGCTGAGCACAGCTGTGGGACGGTCCGCGTACTACATTACTGAA ATCCCGATGATTTATCTGTCGTCCCGGATGCTGAATACCACGGGATGGAA CTTGGCCGGCAAGTGCGGGTATGTCTGGGGATGTACGGCTCTGGTGGTGT GGGTTGGAGCGTACTTCGGATTGCCTGAATTGAAGCATCGGTCGTATCGC GAGGCGGATATTCTGTTTAAGAGAAAGATTTCTGCGAGAAAGTTCAAGAC GACGGAGATTGGGGTCGATGAAAACGAGTAGACTCCTCTCATGGTCCTCC TCTTCTTCGCCCCCGAATCCCCCTGGTGGCTCATCCGCCGCGGCCGCAAA GAAGAAGCCTTGAAATCCATCAGGCGCCTCGGCGCCAAAACCGAAGAACA GGCCCACCAATCACTCGCCATGATCGAACGTACAGTCAAGATCGAGGAGG AAACAGGCGGTAACCCCACACTTCTCGACCTCTGGAAAGGTACCGATCGC AGACGAACAATCATTACCTGCCTGATCTATGCGTCGCAGAACTTTGCGGG TAACTTGATCGCGAACCAGGCTACATACTTTTTCGAGCGCAAACTCCCTC ACTCTCCTCGTGGTCGGCCAAGCCCTAGAAGGTGTCCCATGGGGTTTCTT CATCGCCAACTCCCCAGCCTACGCCAGTGAAGTTGTCCCTCTCCCCCTCC GCGCTGCAGTCACCGCGACCCTGCAAATGAGTTGGTCCATTGGTTCCATC ATTGTCGCGGGTGCTACATATGGCTACAACTCTCTCGAGACGCAATGGGA ATGGCGCGCACCACTTGCCCTGCAGTGGATCTTTCCGGTCATGGAATCCT TCGACATGTTCCTCAACACTAATTTCGTCGCACTTGATCACTTCTCCAAG GTCTTCGGCGTCGAAACCTCACCGGGTGTCTATGCGATCCCGACCAAATG GCAGAGTGCTCTCTTCCAGTCTGGTCAATGCGGTGCCTTCGTGGGTGTAT ATCTGGCGGGACCCATCACCAACAAGATCGGATACCGCTGGACGACTATG CTGGGTCTGGTTCTCATGAACGCGACGATTTTCATCTCATTCTTCATGGC GGCAGAAAGCGTCGCCGAACAGCGGGATGAGAAGCCTCAGAGCGAGAAGG TGGACATCCACCAGTCTGAGGTTCTGGACAACCCAGATCTTATGCATGAA GCCTTTGATGGTGAGAATTACGAGCATCAGATGGGTGTCTGGGAGGCTGC TAAGCAGTACCCTTGGGCTTGTTTCTGGGCGTTCCTCATGTGCTTTACCA TTAGGCCGGCATCTCCCCCGACAAATCCTTCCAACTGAACCTCATTACAA CCTGTCTCCAGTTCGTCGCAAACGCCGTCTCCTGGGTTTTGACCTCATGG TTCCGCCGCCGCACCGTCTTCCTCTACGGCACCGCCACAAACATCACCTT CCTCTTCATCCTCGGAATCATCGCCTCCGTACCACAGAACCACAAGACGA ACTACGCGCAGGCCTGTCTCGGCGTCATCATCTCAGTCGTTTATGCTGGC GCACAAGGCCCCATCTCGTACACCATCATCTCCGAGACCTCGTCGGTGCG ACTCCGCGCGCTGAGCACAGCTGTGGGACGGTCCGCGTACTACATTACTG AAATCCCGATGATTTATCTGTCGTCCCGGATGCTGAATACCACGGGATGG AACTTGGCCGGCAAGTGCGGGTATGTCTGGGGATGTACGGCTCTGGTGGT GTGGGTTGGAGCGTACTTCGGATTGCCTGAATTGAAGCATCGGTCGTATC GCGAGGCGGATATTCTGTTTAAGAGAAAGATTTCTGCGAGAAAGTTCAAG ACGACGGAGATTGGGGTCGATGAAAACGAGTAGACTCCTCTCATGGTCCT CCTCTTCTTCGCCCCCGAATCCCCCTGGTGGCTCATCCGCCGCGGCCGCA AAGAAGAAGCCTTGAAATCCATCAGGCGCCTCGGCGCCAAAACCGAAGAA CAGGCCCACCAATCACTCGCCATGATCGAACGTACAGTCAAGATCGAGGA GGAAACAGGCGGTAACCCCACACTTCTCGACCTCTGGAAAGGTACCGATC GCAGACGAACAATCATTACCTGCCTGATCTATGCGTCGCAGAACTTTGCG GGTAACTTGATCGCGAACCAGGCTACATACTTTTTCGAGCGCAAACTCCC TCACTCTCCTCGTGGTCGGCCAAGCCCTAGAAGGTGTCCCATGGGGTTTC TTCATCGCCAACTCCCCAGCCTACGCCAGTGAAGTTGTCCCTCTCCCCCT CCGCGCTGCAGTCACCGCGACCCTGCAAATGAGTTGGTCCATTGGTTCCA TCATTGTCGCGGGTGCTACATATGGCTACAACTCTCTCGAGACGCAATGG GAATGGCGCGCACCACTTGCCCTGCAGTGGATCTTTCCGGTCATGGAATC CTTCGACATGTTCCTCAACACTAATTTCGTCGCACTTGATCACTTCTCCA AGGTCTTCGGCGTCGAAACCTCACCGGGTGTCTATGCGATCCCGACCAAA TGGCAGAGTGCTCTCTTCCAGTCTGGTCAATGCGGTGCCTTCGTGGGTGT ATATCTGGCGGGACCCATCACCAACAAGATCGGATACCGCTGGACGACTA TGCTGGGTCTGGTTCTCATGAACGCGACGATTTTCATCTCATTCTTCATG GCGGCAGAAAGCGTCGCCGAACAGCGGGATGAGAAGCCTCAGAGCGAGAA GGTGGACATCCACCAGTCTGAGGTTCTGGACAACCCAGATCTTATGCATG AAGCCTTTGATGGTGAGAATTACGAGCATCAGATGGGTGTCTGGGAGGCT GCTAAGCAGTACCCTTGGGCTTGTTTCTGGGCGTTCCTCATGTGCTTTAC CATTAGGCCGGCATCTCCCCCGACAAATCCTTCCAACTGAACCTCATTAC AACCTGTCTCCAGTTCGTCGCAAACGCCGTCTCCTGGGTTTTGACCTCAT GGTTCCGCCGCCGCACCGTCTTCCTCTACGGCACCGCCACAAACATCACC TTCCTCTTCATCCTCGGAATCATCGCCTCCGTACCACAGAACCACAAGAC GAACTACGCGCAGGCCTGTCTCGGCGTCATCATCTCAGTCGTTTATGCTG GCGCACAAGGCCCCATCTCGTACACCATCATCTCCGAGACCTCGTCGGTG CGACTCCGCGCGCTGAGCACAGCTGTGGGACGGTCCGCGTACTACATTAC TGAAATCCCGATGATTTATCTGTCGTCCCGGATGCTGAATACCACGGGAT GGAACTTGGCCGGCAAGTGCGGGTATGTCTGGGGATGTACGGCTCTGGTG GTGTGGGTTGGAGCGTACTTCGGATTGCCTGAATTGAAGCATCGGTCGTA TCGCGAGGCGGATATTCTGTTTAAGAGAAAGATTTCTGCGAGAAAGTTCA AGACGACGGAGATTGGGGTCGATGAAAACGAGTAGACTCCTCTCATGGTC CTCCTCTTCTTCGCCCCCGAATCCCCCTGGTGGCTCATCCGCCGCGGCCG CAAAGAAGAAGCCTTGAAATCCATCAGGCGCCTCGGCGCCAAAACCGAAG AACAGGCCCACCAATCACTCGCCATGATCGAACGTACAGTCAAGATCGAG GAGGAAACAGGCGGTAACCCCACACTTCTCGACCTCTGGAAAGGTACCGA TCGCAGACGAACAATCATTACCTGCCTGATCTATGCGTCGCAGAACTTTG CGGGTAACTTGATCGCGAACCAGGCTACATACTTTTTCGAGCGCAAACTC CCTCACTCTCCTCGTGGTCGGCCAAGCCCTAGAAGGTGTCCCATGGGGTT TCTTCATCGCCAACTCCCCAGCCTACGCCAGTGAAGTTGTCCCTCTCCCC CTCCGCGCTGCAGTCACCGCGACCCTGCAAATGAGTTGGTCCATTGGTTC CATCATTGTCGCGGGTGCTACATATGGCTACAACTCTCTCGAGACGCAAT GGGAATGGCGCGCACCACTTGCCCTGCAGTGGATCTTTCCGGTCATGGAA TCCTTCGACATGTTCCTCAACACTAATTTCGTCGCACTTGATCACTTCTC CAAGGTCTTCGGCGTCGAAACCTCACCGGGTGTCTATGCGATCCCGACCA AATGGCAGAGTGCTCTCTTCCAGTCTGGTCAATGCGGTGCCTTCGTGGGT GTATATCTGGCGGGACCCATCACCAACAAGATCGGATACCGCTGGACGAC TATGCTGGGTCTGGTTCTCATGAACGCGACGATTTTCATCTCATTCTTCA TGGCGGCAGAAAGCGTCGCCGAACAGCGGGATGAGAAGCCTCAGAGCGAG AAGGTGGACATCCACCAGTCTGAGGTTCTGGACAACCCAGATCTTATGCA TGAAGCCTTTGATGGTGAGAATTACGAGCATCAGATGGGTGTCTGGGAGG CTGCTAAGCAGTACCCTTGGGCTTGTTTCTGGGCGTTCCTCATGTGCTTT ACCATTAGGCCGGCATCTCCCCCGACAAATCCTTCCAACTGAACCTCATT ACAACCTGTCTCCAGTTCGTCGCAAACGCCGTCTCCTGGGTTTTGACCTC ATGGTTCCGCCGCCGCACCGTCTTCCTCTACGGCACCGCCACAAACATCA CCTTCCTCTTCATCCTCGGAATCATCGCCTCCGTACCACAGAACCACAAG ACGAACTACGCGCAGGCCTGTCTCGGCGTCATCATCTCAGTCGTTTATGC TGGCGCACAAGGCCCCATCTCGTACACCATCATCTCCGAGACCTCGTCGG TGCGACTCCGCGCGCTGAGCACAGCTGTGGGACGGTCCGCGTACTACATT ACTGAAATCCCGATGATTTATCTGTCGTCCCGGATGCTGAATACCACGGG ATGGAACTTGGCCGGCAAGTGCGGGTATGTCTGGGGATGTACGGCTCTGG TGGTGTGGGTTGGAGCGTACTTCGGATTGCCTGAATTGAAGCATCGGTCG TATCGCGAGGCGGATATTCTGTTTAAGAGAAAGATTTCTGCGAGAAAGTT CAAGACGACGGAGATTGGGGTCGATGAAAACGAGTAGACTCCTCTCATGG TCCTCCTCTTCTTCGCCCCCGAATCCCCCTGGTGGCTCATCCGCCGCGGC CGCAAAGAAGAAGCCTTGAAATCCATCAGGCGCCTCGGCGCCAAAACCGA AGAACAGGCCCACCAATCACTCGCCATGATCGAACGTACAGTCAAGATCG AGGAGGAAACAGGCGGTAACCCCACACTTCTCGACCTCTGGAAAGGTACC GATCGCAGACGAACAATCATTACCTGCCTGATCTATGCGTCGCAGAACTT TGCGGGTAACTTGATCGCGAACCAGGCTACATACTTTTTCGAGCGCAAAC TCCCTCACTCTCCTCGTGGTCGGCCAAGCCCTAGAAGGTGTCCCATGGGG TTTCTTCATCGCCAACTCCCCAGCCTACGCCAGTGAAGTTGTCCCTCTCC CCCTCCGCGCTGCAGTCACCGCGACCCTGCAAATGAGTTGGTCCATTGGT TCCATCATTGTCGCGGGTGCTACATATGGCTACAACTCTCTCGAGACGCA ATGGGAATGGCGCGCACCACTTGCCCTGCAGTGGATCTTTCCGGTCATGG AATCCTTCGACATGTTCCTCAACACTAATTTCGTCGCACTTGATCACTTC TCCAAGGTCTTCGGCGTCGAAACCTCACCGGGTGTCTATGCGATCCCGAC CAAATGGCAGAGTGCTCTCTTCCAGTCTGGTCAATGCGGTGCCTTCGTGG GTGTATATCTGGCGGGACCCATCACCAACAAGATCGGATACCGCTGGACG ACTATGCTGGGTCTGGTTCTCATGAACGCGACGATTTTCATCTCATTCTT CATGGCGGCAGAAAGCGTCGCCGAACAGCGGGATGAGAAGCCTCAGAGCG AGAAGGTGGACATCCACCAGTCTGAGGTTCTGGACAACCCAGATCTTATG CATGAAGCCTTTGATGGTGAGAATTACGAGCATCAGATGGGTGTCTGGGA GGCTGCTAAGCAGTACCCTTGGGCTTGTTTCTGGGCGTTCCTCATGTGCT TTACCATTAGGCCGGCATCTCCCCCGACAAATCCTTCCAACTGAACCTCA TTACAACCTGTCTCCAGTTCGTCGCAAACGCCGTCTCCTGGGTTTTGACC TCATGGTTCCGCCGCCGCACCGTCTTCCTCTACGGCACCGCCACAAACAT CACCTTCCTCTTCATCCTCGGAATCATCGCCTCCGTACCACAGAACCACA AGACGAACTACGCGCAGGCCTGTCTCGGCGTCATCATCTCAGTCGTTTAT GCTGGCGCACAAGGCCCCATCTCGTACACCATCATCTCCGAGACCTCGTC GGTGCGACTCCGCGCGCTGAGCACAGCTGTGGGACGGTCCGCGTACTACA TTACTGAAATCCCGATGATTTATCTGTCGTCCCGGATGCTGAATACCACG GGATGGAACTTGGCCGGCAAGTGCGGGTATGTCTGGGGATGTACGGCTCT GGTGGTGTGGGTTGGAGCGTACTTCGGATTGCCTGAATTGAAGCATCGGT CGTATCGCGAGGCGGATATTCTGTTTAAGAGAAAGATTTCTGCGAGAAAG TTCAAGACGACGGAGATTGGGGTCGATGAAAACGAGTAGACTCCTCTCAT GGTCCTCCTCTTCTTCGCCCCCGAATCCCCCTGGTGGCTCATCCGCCGCG GCCGCAAAGAAGAAGCCTTGAAATCCATCAGGCGCCTCGGCGCCAAAACC GAAGAACAGGCCCACCAATCACTCGCCATGATCGAACGTACAGTCAAGAT CGAGGAGGAAACAGGCGGTAACCCCACACTTCTCGACCTCTGGAAAGGTA CCGATCGCAGACGAACAATCATTACCTGCCTGATCTATGCGTCGCAGAAC TTTGCGGGTAACTTGATCGCGAACCAGGCTACATACTTTTTCGAGCGCAA ACTCCCTCACTCTCCTCGTGGTCGGCCAAGCCCTAGAAGGTGTCCCATGG GGTTTCTTCATCGCCAACTCCCCAGCCTACGCCAGTGAAGTTGTCCCTCT CCCCCTCCGCGCTGCAGTCACCGCGACCCTGCAAATGAGTTGGTCCATTG GTTCCATCATTGTCGCGGGTGCTACATATGGCTACAACTCTCTCGAGACG CAATGGGAATGGCGCGCACCACTTGCCCTGCAGTGGATCTTTCCGGTCAT GGAATCCTTCGACATGTTCCTCAACACTAATTTCGTCGCACTTGATCACT TCTCCAAGGTCTTCGGCGTCGAAACCTCACCGGGTGTCTATGCGATCCCG ACCAAATGGCAGAGTGCTCTCTTCCAGTCTGGTCAATGCGGTGCCTTCGT GGGTGTATATCTGGCGGGACCCATCACCAACAAGATCGGATACCGCTGGA CGACTATGCTGGGTCTGGTTCTCATGAACGCGACGATTTTCATCTCATTC TTCATGGCGGCAGAAAGCGTCGCCGAACAGCGGGATGAGAAGCCTCAGAG CGAGAAGGTGGACATCCACCAGTCTGAGGTTCTGGACAACCCAGATCTTA TGCATGAAGCCTTTGATGGTGAGAATTACGAGCATCAGATGGGTGTCTGG GAGGCTGCTAAGCAGTACCCTTGGGCTTGTTTCTGGGCGTTCCTCATGTG CTTTACCATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012808-T1.utr3p1 | KJC3_012808-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012808-T1.utr5p1 | KJC3_012808-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR005829 |
DBxref | InterPro:IPR003663 |
DBxref | InterPro:IPR005828 |
DBxref | PFAM:PF00083 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:4621462..4623652 - |
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