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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4676682..4677967- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012827-T1 ID=KJC3_012827-T1|Name=KJC3_012827-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1286bp|location=Sequence derived from alignment at ch8:4676682..4677967- (Aspergillus niger KJC3)
CAGATTCGGCGTTCTATTCCTCAACACGAGCCCGATCCCACTCTCGGTCT
TTGCGATGATTGCAAAACCCGCTTGAAAAAGCTTCGCACTACCCACTTAT
CATGATCCCAGCGACGCAAACACAACTGATCTGGAACAAAATGAGAATTA
GTCAAGATCAACCAGAAATAACCCTGTACCGCGGCTTCCCCGGCACAGGG
ATCTACACATGGTCTCCCTTCGTCACAAAACTCGAAGCCCGACTTCGGCT
CGCAGGGCTATCTTATCGTACTGAAAGTGGGTCGATTCGCGCCGCGCCAC
GGGGCAAAGTGCCTTATGTTACTGTCAGCGATACCGACGAGTCGGGGAGA
AATCAGGCTCGGACAATGTCTGATTCGGGTCTCATTATACAAGATTTCGT
CAATGAGGCGGTACTCCCTGATCTAAATGGGGATTTGACTGTGCAGGAGA
AAGTCCTCGACTCAGGGGTTAGGGCGTTGTTGGAAGACAAGCTGTATTTC
CTTCAGGTATCATCACCGTCCACACTGCCTGTACATTGCGAGATAATTAA
CCAAAAGTAGGGCTACGAAAAATGGATCGACAATTACTATTCCATGCGTG
CACACATCCTCGCCTCACTGCCATATCCCGTCCAGGTTATCGTGGGGCAT
CTCATCTACCGGAAACAGTATCAGGTATTGCACGGGCAAGGGACACTGAG
ATATTCAGACGCGGAACGGACGACATTCAAAAAACAGATATGGGAGGAAA
TTAATGCATTACTGGCGGATTCTAGGTTGAACAGTGATCGGAAGGGAGTA
TTCTGGGTACTTGGAGGTCAGCGTCCGACTGAAGCTGATGTTACGCTGTT
TGGGTTCATTGTTGGGGCATTGATCTGTACTGCGTGAGTTGTCTGTCATG
AGATATAATGAGCTTGGGATGCTAATGGATTGCAGATGTCCTGAGACGCA
AAGGATCGTGAGAGGGTTGCCGGTGGTCGTGGAGTATGCGCACAGGATCC
ATGATCGGTATTTTCCGGATTATGAGCTTTGGGCGGAGGATTGAGTTCAA
TTTTTCATTTATGTTATCTGTATCAAATTGAAGTCATGTCAACTCATGCC
ATATGCAACGGGGACAAGCGGGTTGTCGTCTTGAATCCTTATTACTCCGG
ACACGGTATGTGTGCGATCTAGATCATTCCGGAAGCACCGATACGATAAT
TATAACCCGCGGACTACATTCAACAGATAAGCTGTAAGTCCCCGTGGACA
GTAAACCACCATCAAAAGAGTGCGAGTCTTTTGCCC back to topCoding sequence (CDS) from alignment at ch8:4676682..4677967- >KJC3_012827-T1 ID=KJC3_012827-T1|Name=KJC3_012827-T1|organism=Aspergillus niger KJC3|type=CDS|length=2511bp|location=Sequence derived from alignment at ch8:4676682..4677967- (Aspergillus niger KJC3)
ATGTCCTGAGACGCAAAGGATCGTGAGAGGGTTGCCGGTGGTCGTGGAGT
ATGCGCACAGGATCCATGATCGGTATTTTCCGGATTATGAGCTTTGGGCG
GAGGATTGAGGCTACGAAAAATGGATCGACAATTACTATTCCATGCGTGC
ACACATCCTCGCCTCACTGCCATATCCCGTCCAGGTTATCGTGGGGCATC
TCATCTACCGGAAACAGTATCAGGTATTGCACGGGCAAGGGACACTGAGA
TATTCAGACGCGGAACGGACGACATTCAAAAAACAGATATGGGAGGAAAT
TAATGCATTACTGGCGGATTCTAGGTTGAACAGTGATCGGAAGGGAGTAT
TCTGGGTACTTGGAGGTCAGCGTCCGACTGAAGCTGATGTTACGCTGTTT
GGGTTCATTGTTGGGGCATTGATCTGTACTGCATGATCCCAGCGACGCAA
ACACAACTGATCTGGAACAAAATGAGAATTAGTCAAGATCAACCAGAAAT
AACCCTGTACCGCGGCTTCCCCGGCACAGGGATCTACACATGGTCTCCCT
TCGTCACAAAACTCGAAGCCCGACTTCGGCTCGCAGGGCTATCTTATCGT
ACTGAAAGTGGGTCGATTCGCGCCGCGCCACGGGGCAAAGTGCCTTATGT
TACTGTCAGCGATACCGACGAGTCGGGGAGAAATCAGGCTCGGACAATGT
CTGATTCGGGTCTCATTATACAAGATTTCGTCAATGAGGCGGTACTCCCT
GATCTAAATGGGGATTTGACTGTGCAGGAGAAAGTCCTCGACTCAGGGGT
TAGGGCGTTGTTGGAAGACAAGCTGTATTTCCTTCAGATGTCCTGAGACG
CAAAGGATCGTGAGAGGGTTGCCGGTGGTCGTGGAGTATGCGCACAGGAT
CCATGATCGGTATTTTCCGGATTATGAGCTTTGGGCGGAGGATTGAGGCT
ACGAAAAATGGATCGACAATTACTATTCCATGCGTGCACACATCCTCGCC
TCACTGCCATATCCCGTCCAGGTTATCGTGGGGCATCTCATCTACCGGAA
ACAGTATCAGGTATTGCACGGGCAAGGGACACTGAGATATTCAGACGCGG
AACGGACGACATTCAAAAAACAGATATGGGAGGAAATTAATGCATTACTG
GCGGATTCTAGGTTGAACAGTGATCGGAAGGGAGTATTCTGGGTACTTGG
AGGTCAGCGTCCGACTGAAGCTGATGTTACGCTGTTTGGGTTCATTGTTG
GGGCATTGATCTGTACTGCATGATCCCAGCGACGCAAACACAACTGATCT
GGAACAAAATGAGAATTAGTCAAGATCAACCAGAAATAACCCTGTACCGC
GGCTTCCCCGGCACAGGGATCTACACATGGTCTCCCTTCGTCACAAAACT
CGAAGCCCGACTTCGGCTCGCAGGGCTATCTTATCGTACTGAAAGTGGGT
CGATTCGCGCCGCGCCACGGGGCAAAGTGCCTTATGTTACTGTCAGCGAT
ACCGACGAGTCGGGGAGAAATCAGGCTCGGACAATGTCTGATTCGGGTCT
CATTATACAAGATTTCGTCAATGAGGCGGTACTCCCTGATCTAAATGGGG
ATTTGACTGTGCAGGAGAAAGTCCTCGACTCAGGGGTTAGGGCGTTGTTG
GAAGACAAGCTGTATTTCCTTCAGATGTCCTGAGACGCAAAGGATCGTGA
GAGGGTTGCCGGTGGTCGTGGAGTATGCGCACAGGATCCATGATCGGTAT
TTTCCGGATTATGAGCTTTGGGCGGAGGATTGAGGCTACGAAAAATGGAT
CGACAATTACTATTCCATGCGTGCACACATCCTCGCCTCACTGCCATATC
CCGTCCAGGTTATCGTGGGGCATCTCATCTACCGGAAACAGTATCAGGTA
TTGCACGGGCAAGGGACACTGAGATATTCAGACGCGGAACGGACGACATT
CAAAAAACAGATATGGGAGGAAATTAATGCATTACTGGCGGATTCTAGGT
TGAACAGTGATCGGAAGGGAGTATTCTGGGTACTTGGAGGTCAGCGTCCG
ACTGAAGCTGATGTTACGCTGTTTGGGTTCATTGTTGGGGCATTGATCTG
TACTGCATGATCCCAGCGACGCAAACACAACTGATCTGGAACAAAATGAG
AATTAGTCAAGATCAACCAGAAATAACCCTGTACCGCGGCTTCCCCGGCA
CAGGGATCTACACATGGTCTCCCTTCGTCACAAAACTCGAAGCCCGACTT
CGGCTCGCAGGGCTATCTTATCGTACTGAAAGTGGGTCGATTCGCGCCGC
GCCACGGGGCAAAGTGCCTTATGTTACTGTCAGCGATACCGACGAGTCGG
GGAGAAATCAGGCTCGGACAATGTCTGATTCGGGTCTCATTATACAAGAT
TTCGTCAATGAGGCGGTACTCCCTGATCTAAATGGGGATTTGACTGTGCA
GGAGAAAGTCCTCGACTCAGGGGTTAGGGCGTTGTTGGAAGACAAGCTGT
ATTTCCTTCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012827-T1.utr3p1 | KJC3_012827-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012827-T1.utr5p1 | KJC3_012827-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.10 |
| DBxref | InterPro:IPR026928 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR012336 |
| DBxref | PFAM:PF17172 |
| DBxref | PFAM:PF13410 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4676682..4677967 - |
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