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KJC3_012839-T1, KJC3_012839-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012839-T1
Unique NameKJC3_012839-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4710982..4712843-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012839-T1 ID=KJC3_012839-T1|Name=KJC3_012839-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1862bp|location=Sequence derived from alignment at ch8:4710982..4712843- (Aspergillus niger KJC3)
CGCACAAAACATCCGTCCTTCTAATTCGTCGTGCCACGAGAAGACCATCG
GAGCATCACTTGCTTCCGTTCCTGGTACAGAAATGATTCTTCGCTTAACG
TCTGGTGGGGCTTCATACCATCCAGTCAAACTACCCGAGGAGTAGTATAT
GTTGCGGCGGGTGCTAGACAGTTTTGATGCTTGCATCGCATGACTCGACG
GATGATTAATCTCTGGATACTGACAGAACTTTCGCCCGCTAGACATCAAT
CCCCCCATGGTTAAGCATGCTCGAGGCTGCAGTACTGATTCCTCGCAAGG
GTCTTCTTTACATGCAGGGACCCGGCTAAGAGTGTATAGGCACTGCAGTC
TTCACGACTCATCCTCACGTCAGAAAAACCACCCGAACCCTGTGCTGGGC
AGTTGGCAGGTGGCTTTCGATCACCCGCATGCTTACCCCTGTGAAGTCAT
GGCTCACAACAAATCACGGAGCCTTTTATACTTTTGCTCGCGTCGGTCAG
GAATGGGTAAGAAGTATCGAAAAATAAAGTTCTGAAAAGCAAAATTGGGC
GCAATCACCAGCAATCGAGAGTGTGTCACATTTCTTGTCTCTTCGGAGAT
GAGAGGTGCTGCAAACTGCGTGAAGGACACCATTCGTATAGATTCAGGCC
TGTCGCTGAAGACTTGACGTATCTTGACCCTCTAGATTTTCACCGCTCGT
GTATGATGTTGCCTATTGCCTCTTTACATTGGGTGCGGCTGCATTAGTGG
CTCTTATCACCAACGTTGGGCACACTGATCGACACGCATCACCCAGCCAC
CGTATCCTTAACCTTCTCCAGCACCACCCCGTTGATAAGACAAACATCAA
CGTGCAAGGATTAGAGATACCTACGATGGCTTCCTCCAAAACCGAGCTCG
ACTACCGCATTTTGGATGATCTAGGCTACGGCCTTGGTAGCGGAACCGCA
GCAGCATTCCGACTCAATGGAATATTTCACTTCTGGAAAGAGCACCTCGG
CTTCAACATCCACCCGACTATCCGAGAGTCCCTGCAGACAAGGAATCCCC
GCATCGCGGATGTAGCCACAGGCACAGCTATCTGGCTCATAGACCTGGCG
AAAGAGCTTCCGGGTGCGACCCTTGACGGCCTCGATGTCACACTCGACAT
GGCGCCTCCAGTGGAGTGGCTCCCATCTAACATGACCTTGCGCCAATGGA
ACATATTCGAAGATTTACCCGAAGAGCTGGTGGGACAATTCGATCTCGTG
CATCTGCGATTACTCCTCCCAGTTATCCAGAATGGGGACCCCTCGTCAAT
AATCCAGAAGATCACCCGCATGCTAAAGCCCGGAGGATGGATTCAATGGG
ATGACCTGAACATCCGAGAGGTCAAGATTTTCAAGGCCAGGCCTGAACTC
AAGACCGAAGCATTGGAATACCTCTCTCGGTTCTGGAATACAGGCGAACG
GCAGGACTGGATAGGTCGTCTTCCGCAGAGTTTTGAACAAGAGGGACTGG
AAAGAACGGGGATCGATAGATATGAAAACTTGAAGCAATATCTAAAGGCC
GACTGCGAGGGGTATATAGTCACTTGCGAGGAAACTGCCCGAACACTTGC
TAGGAAAGGGAAGGTAGATGAGGCAAGAGAATTCTCGCAAATCGTCCACC
AAGCATCGCTGGAAGCTGCAGCTGGCGCTGCCGTGGTGGCTACTAGGGTC
GTTTGCATCGGGCAAAAGCCGGTGGAGCCGTAAACTAAGCGATCATCTGA
AGGGAAGTAGACAAGTTTATGGAGTAGTTGATGAGTATGGTTGTGATCGA
GGGGGTGGATGTCGATGCATAACGTGGTATAGAGTCGATGCGATTCATTA
CTTTTTACGGAC
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Coding sequence (CDS) from alignment at ch8:4710982..4712843-

>KJC3_012839-T1 ID=KJC3_012839-T1|Name=KJC3_012839-T1|organism=Aspergillus niger KJC3|type=CDS|length=858bp|location=Sequence derived from alignment at ch8:4710982..4712843- (Aspergillus niger KJC3)
ATGGCTTCCTCCAAAACCGAGCTCGACTACCGCATTTTGGATGATCTAGG
CTACGGCCTTGGTAGCGGAACCGCAGCAGCATTCCGACTCAATGGAATAT
TTCACTTCTGGAAAGAGCACCTCGGCTTCAACATCCACCCGACTATCCGA
GAGTCCCTGCAGACAAGGAATCCCCGCATCGCGGATGTAGCCACAGGCAC
AGCTATCTGGCTCATAGACCTGGCGAAAGAGCTTCCGGGTGCGACCCTTG
ACGGCCTCGATGTCACACTCGACATGGCGCCTCCAGTGGAGTGGCTCCCA
TCTAACATGACCTTGCGCCAATGGAACATATTCGAAGATTTACCCGAAGA
GCTGGTGGGACAATTCGATCTCGTGCATCTGCGATTACTCCTCCCAGTTA
TCCAGAATGGGGACCCCTCGTCAATAATCCAGAAGATCACCCGCATGCTA
AAGCCCGGAGGATGGATTCAATGGGATGACCTGAACATCCGAGAGGTCAA
GATTTTCAAGGCCAGGCCTGAACTCAAGACCGAAGCATTGGAATACCTCT
CTCGGTTCTGGAATACAGGCGAACGGCAGGACTGGATAGGTCGTCTTCCG
CAGAGTTTTGAACAAGAGGGACTGGAAAGAACGGGGATCGATAGATATGA
AAACTTGAAGCAATATCTAAAGGCCGACTGCGAGGGGTATATAGTCACTT
GCGAGGAAACTGCCCGAACACTTGCTAGGAAAGGGAAGGTAGATGAGGCA
AGAGAATTCTCGCAAATCGTCCACCAAGCATCGCTGGAAGCTGCAGCTGG
CGCTGCCGTGGTGGCTACTAGGGTCGTTTGCATCGGGCAAAAGCCGGTGG
AGCCGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012839KJC3_012839Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012839-T1KJC3_012839-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012839-T1.cdsKJC3_012839-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012839-T1.utr3p1KJC3_012839-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012839-T1.exon2KJC3_012839-T1.exon2Aspergillus niger KJC3exon
KJC3_012839-T1.exon1KJC3_012839-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012839-T1.utr5p2KJC3_012839-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012839-T1.utr5p1KJC3_012839-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR041698
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4710982..4712843 -
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