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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4715901..4717516+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012841-T1 ID=KJC3_012841-T1|Name=KJC3_012841-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1616bp|location=Sequence derived from alignment at ch8:4715901..4717516+ (Aspergillus niger KJC3)
ATGGCACTGAGACTTCGCATTGAGGTCAATCAACAGTCGGATCAAAATCC
TACATCCCCAGATTATGAACGAGTGAATATAGCAAGTAGCAGCCATGTTA
TCACGGATGGTCACCTGGACGGAAATGTTATTATCTTCATGCCAGGCAAC
GAGACTGCCAATTCGTCGCAACAATATCTCGTTGAGGTTACCTTCGAAGG
TAATCTCCCTACCAAAGAAATTCTTCTCCGGTTCTAAGCCGCTGCATCAG
GCCATTTATCAGCAGCAATCAATTTGAATATTTCAACACAGCTACTGCGA
CTGGCAAAAAACATCACTGTACAATATCCCTCCTGCTCTCTCCGATAAGG
TCTCTATTAACTTACCCTCAGCTCCTCCGAGCATCCGATGTGCGCGAATT
ATCACAACAATCCACCACCAACAACACATCCTCACGCACAATCCTACATC
CATTCCACTTCAACATCCCCCAAACCGCCAACTTTGTCACCTCCGACCAA
TATGACTCCACAACACCCTTGCCGCCATCGCTCTCCTTCAAACCCATGCC
AGTCTACAACTCCAACGATCTCATCCTGCGCGGACAAGGCCGCATAGAAT
ACTTTCTCAAAGCGCGACTCTTCGACCACGGGAATTGCATCGCCGAAAAT
GAAGCGCCAGTAACGTTCGCTCCAGCCCGCGAATGTTCTCCTCCCATTTG
CATCTCCGACTTTCCCGGCGAATACACCCTCGCGTCGTCACGACGTGTGC
GCGACAGACTACATCGCCGCGAATTATACTATCTGTCCGTACAAACGGGG
GAACCTGCTCCGCTGTATCTAGGTCGCTCGACTATGGTATCTACGGTAGT
TCCGCTAAAATGGAATTATCGCTGTTTGGCTCCGTCGCAACAGCACGCAA
ATGTTCCCGACATATATGCCACCATCCAGACGTCTCTTCGCGCGACGACA
TTTGTTTCTGTTTCTCCTCAAGATCGGATTCCATTAGAGGAGGACGCTAA
CAAGCTGTTGGACTTTAAACTTGTTGCGAATACGACGGGGACTAGTCTCA
CGCAGGCGAGGAAGTTGCGCATTGCATCGTGGGAGATTCTGGATGGTGGA
GGGCCTCATGGAAAGGGTATGTAGCGCACTCTGTCGGTGTATAGTTGTTC
AATCGCTAACATTTGCGAAACCAATAAAAAGACCAAACAACAACAACATA
CCAAGCAATCACACCCCTGATTCTCAACTTCGACGCCCGCGATTACCTCC
CTCCTACATTTACCCATCCGTACATCTCCCGACGGTACAGCCTCTCTCTC
TCCGTTTCGGTCGATGTCGATAACTCAAGGCATGCGAGTTTGCGATTGCG
GGTTCCCGTGCAGGTGTCATATGAACGGGGCGAGTGTCCGATAGACTGTA
GGGAAGACGAGTCATTTCGACTAGATCCTGGAATCCTCCCTCCTTATATC
AAGTGACGACTAGGTTTTCGAGGTATACCCAAAATGAGAATTATAATGAC
ATCCAAAGTGAACCTAACATGATTGTGCGAAACTACTTTGCACTGGTATC
GCGGAATTGGATGGTCCTTGTGCATTGGGCTGCAGATATAGTGTGTATCC
CATCAAACTAGCAGAG back to topCoding sequence (CDS) from alignment at ch8:4715901..4717516+ >KJC3_012841-T1 ID=KJC3_012841-T1|Name=KJC3_012841-T1|organism=Aspergillus niger KJC3|type=CDS|length=5148bp|location=Sequence derived from alignment at ch8:4715901..4717516+ (Aspergillus niger KJC3)
ATGGCACTGAGACTTCGCATTGAGGTCAATCAACAGTCGGATCAAAATCC
TACATCCCCAGATTATGAACGAGTGAATATAGCAAGTAGCAGCCATGTTA
TCACGGATGGTCACCTGGACGGAAATGTTATTATCTTCATGCCAGGCAAC
GAGACTGCCAATTCGTCGCAACAATATCTCGTTGAGGTTACCTTCGAAGG
CCATTTATCAGCAGCAATCAATTTGAATATTTCAACACAGCTACTGCGAC
TGGCAAAAAACATCACTCTCCTCCGAGCATCCGATGTGCGCGAATTATCA
CAACAATCCACCACCAACAACACATCCTCACGCACAATCCTACATCCATT
CCACTTCAACATCCCCCAAACCGCCAACTTTGTCACCTCCGACCAATATG
ACTCCACAACACCCTTGCCGCCATCGCTCTCCTTCAAACCCATGCCAGTC
TACAACTCCAACGATCTCATCCTGCGCGGACAAGGCCGCATAGAATACTT
TCTCAAAGCGCGACTCTTCGACCACGGGAATTGCATCGCCGAAAATGAAG
CGCCAGTAACGTTCGCTCCAGCCCGCGAATGTTCTCCTCCCATTTGCATC
TCCGACTTTCCCGGCGAATACACCCTCGCGTCGTCACGACGTGTGCGCGA
CAGACTACATCGCCGCGAATTATACTATCTGTCCGTACAAACGGGGGAAC
CTGCTCCGCTGTATCTAGGTCGCTCGACTATGGTATCTACGGTAGTTCCG
CTAAAATGGAATTATCGCTGTTTGGCTCCGTCGCAACAGCACGCAAATGT
TCCCGACATATATGCCACCATCCAGACGTCTCTTCGCGCGACGACATTTG
TTTCTGTTTCTCCTCAAGATCGGATTCCATTAGAGGAGGACGCTAACAAG
CTGTTGGACTTTAAACTTGTTGCGAATACGACGGGGACTAGTCTCACGCA
GGCGAGGAAGTTGCGCATTGCATCGTGGGAGATTCTGGATGGTGGAGGGC
CTCATGGAAAGGACCAAACAACAACAACATACCAAGCAATCACACCCCTG
ATTCTCAACTTCGACGCCCGCGATTACCTCCCTCCTACATTTACCCATCC
GTACATCTCCCGACGGTACAGCCTCTCTCTCTCCGTTTCGGTCGATGTCG
ATAACTCAAGGCATGCGAGTTTGCGATTGCGGGTTCCCGTGCAGGTGTCA
TATGAACGGGGCGAGTGTCCGATAGACTGTAGGGAAGACGAGTCATTTCG
ACTAGATCCTGGAATCCTCCCTCCTTATATCAAGTGAATGGCACTGAGAC
TTCGCATTGAGGTCAATCAACAGTCGGATCAAAATCCTACATCCCCAGAT
TATGAACGAGTGAATATAGCAAGTAGCAGCCATGTTATCACGGATGGTCA
CCTGGACGGAAATGTTATTATCTTCATGCCAGGCAACGAGACTGCCAATT
CGTCGCAACAATATCTCGTTGAGGTTACCTTCGAAGGCCATTTATCAGCA
GCAATCAATTTGAATATTTCAACACAGCTACTGCGACTGGCAAAAAACAT
CACTCTCCTCCGAGCATCCGATGTGCGCGAATTATCACAACAATCCACCA
CCAACAACACATCCTCACGCACAATCCTACATCCATTCCACTTCAACATC
CCCCAAACCGCCAACTTTGTCACCTCCGACCAATATGACTCCACAACACC
CTTGCCGCCATCGCTCTCCTTCAAACCCATGCCAGTCTACAACTCCAACG
ATCTCATCCTGCGCGGACAAGGCCGCATAGAATACTTTCTCAAAGCGCGA
CTCTTCGACCACGGGAATTGCATCGCCGAAAATGAAGCGCCAGTAACGTT
CGCTCCAGCCCGCGAATGTTCTCCTCCCATTTGCATCTCCGACTTTCCCG
GCGAATACACCCTCGCGTCGTCACGACGTGTGCGCGACAGACTACATCGC
CGCGAATTATACTATCTGTCCGTACAAACGGGGGAACCTGCTCCGCTGTA
TCTAGGTCGCTCGACTATGGTATCTACGGTAGTTCCGCTAAAATGGAATT
ATCGCTGTTTGGCTCCGTCGCAACAGCACGCAAATGTTCCCGACATATAT
GCCACCATCCAGACGTCTCTTCGCGCGACGACATTTGTTTCTGTTTCTCC
TCAAGATCGGATTCCATTAGAGGAGGACGCTAACAAGCTGTTGGACTTTA
AACTTGTTGCGAATACGACGGGGACTAGTCTCACGCAGGCGAGGAAGTTG
CGCATTGCATCGTGGGAGATTCTGGATGGTGGAGGGCCTCATGGAAAGGA
CCAAACAACAACAACATACCAAGCAATCACACCCCTGATTCTCAACTTCG
ACGCCCGCGATTACCTCCCTCCTACATTTACCCATCCGTACATCTCCCGA
CGGTACAGCCTCTCTCTCTCCGTTTCGGTCGATGTCGATAACTCAAGGCA
TGCGAGTTTGCGATTGCGGGTTCCCGTGCAGGTGTCATATGAACGGGGCG
AGTGTCCGATAGACTGTAGGGAAGACGAGTCATTTCGACTAGATCCTGGA
ATCCTCCCTCCTTATATCAAGTGAATGGCACTGAGACTTCGCATTGAGGT
CAATCAACAGTCGGATCAAAATCCTACATCCCCAGATTATGAACGAGTGA
ATATAGCAAGTAGCAGCCATGTTATCACGGATGGTCACCTGGACGGAAAT
GTTATTATCTTCATGCCAGGCAACGAGACTGCCAATTCGTCGCAACAATA
TCTCGTTGAGGTTACCTTCGAAGGCCATTTATCAGCAGCAATCAATTTGA
ATATTTCAACACAGCTACTGCGACTGGCAAAAAACATCACTCTCCTCCGA
GCATCCGATGTGCGCGAATTATCACAACAATCCACCACCAACAACACATC
CTCACGCACAATCCTACATCCATTCCACTTCAACATCCCCCAAACCGCCA
ACTTTGTCACCTCCGACCAATATGACTCCACAACACCCTTGCCGCCATCG
CTCTCCTTCAAACCCATGCCAGTCTACAACTCCAACGATCTCATCCTGCG
CGGACAAGGCCGCATAGAATACTTTCTCAAAGCGCGACTCTTCGACCACG
GGAATTGCATCGCCGAAAATGAAGCGCCAGTAACGTTCGCTCCAGCCCGC
GAATGTTCTCCTCCCATTTGCATCTCCGACTTTCCCGGCGAATACACCCT
CGCGTCGTCACGACGTGTGCGCGACAGACTACATCGCCGCGAATTATACT
ATCTGTCCGTACAAACGGGGGAACCTGCTCCGCTGTATCTAGGTCGCTCG
ACTATGGTATCTACGGTAGTTCCGCTAAAATGGAATTATCGCTGTTTGGC
TCCGTCGCAACAGCACGCAAATGTTCCCGACATATATGCCACCATCCAGA
CGTCTCTTCGCGCGACGACATTTGTTTCTGTTTCTCCTCAAGATCGGATT
CCATTAGAGGAGGACGCTAACAAGCTGTTGGACTTTAAACTTGTTGCGAA
TACGACGGGGACTAGTCTCACGCAGGCGAGGAAGTTGCGCATTGCATCGT
GGGAGATTCTGGATGGTGGAGGGCCTCATGGAAAGGACCAAACAACAACA
ACATACCAAGCAATCACACCCCTGATTCTCAACTTCGACGCCCGCGATTA
CCTCCCTCCTACATTTACCCATCCGTACATCTCCCGACGGTACAGCCTCT
CTCTCTCCGTTTCGGTCGATGTCGATAACTCAAGGCATGCGAGTTTGCGA
TTGCGGGTTCCCGTGCAGGTGTCATATGAACGGGGCGAGTGTCCGATAGA
CTGTAGGGAAGACGAGTCATTTCGACTAGATCCTGGAATCCTCCCTCCTT
ATATCAAGTGAATGGCACTGAGACTTCGCATTGAGGTCAATCAACAGTCG
GATCAAAATCCTACATCCCCAGATTATGAACGAGTGAATATAGCAAGTAG
CAGCCATGTTATCACGGATGGTCACCTGGACGGAAATGTTATTATCTTCA
TGCCAGGCAACGAGACTGCCAATTCGTCGCAACAATATCTCGTTGAGGTT
ACCTTCGAAGGCCATTTATCAGCAGCAATCAATTTGAATATTTCAACACA
GCTACTGCGACTGGCAAAAAACATCACTCTCCTCCGAGCATCCGATGTGC
GCGAATTATCACAACAATCCACCACCAACAACACATCCTCACGCACAATC
CTACATCCATTCCACTTCAACATCCCCCAAACCGCCAACTTTGTCACCTC
CGACCAATATGACTCCACAACACCCTTGCCGCCATCGCTCTCCTTCAAAC
CCATGCCAGTCTACAACTCCAACGATCTCATCCTGCGCGGACAAGGCCGC
ATAGAATACTTTCTCAAAGCGCGACTCTTCGACCACGGGAATTGCATCGC
CGAAAATGAAGCGCCAGTAACGTTCGCTCCAGCCCGCGAATGTTCTCCTC
CCATTTGCATCTCCGACTTTCCCGGCGAATACACCCTCGCGTCGTCACGA
CGTGTGCGCGACAGACTACATCGCCGCGAATTATACTATCTGTCCGTACA
AACGGGGGAACCTGCTCCGCTGTATCTAGGTCGCTCGACTATGGTATCTA
CGGTAGTTCCGCTAAAATGGAATTATCGCTGTTTGGCTCCGTCGCAACAG
CACGCAAATGTTCCCGACATATATGCCACCATCCAGACGTCTCTTCGCGC
GACGACATTTGTTTCTGTTTCTCCTCAAGATCGGATTCCATTAGAGGAGG
ACGCTAACAAGCTGTTGGACTTTAAACTTGTTGCGAATACGACGGGGACT
AGTCTCACGCAGGCGAGGAAGTTGCGCATTGCATCGTGGGAGATTCTGGA
TGGTGGAGGGCCTCATGGAAAGGACCAAACAACAACAACATACCAAGCAA
TCACACCCCTGATTCTCAACTTCGACGCCCGCGATTACCTCCCTCCTACA
TTTACCCATCCGTACATCTCCCGACGGTACAGCCTCTCTCTCTCCGTTTC
GGTCGATGTCGATAACTCAAGGCATGCGAGTTTGCGATTGCGGGTTCCCG
TGCAGGTGTCATATGAACGGGGCGAGTGTCCGATAGACTGTAGGGAAGAC
GAGTCATTTCGACTAGATCCTGGAATCCTCCCTCCTTATATCAAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012841-T1.utr3p1 | KJC3_012841-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4715901..4717516 + |
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