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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4727303..4729402- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012846-T1 ID=KJC3_012846-T1|Name=KJC3_012846-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2100bp|location=Sequence derived from alignment at ch8:4727303..4729402- (Aspergillus niger KJC3)
ATGTGGTTAAGGAATGTTTCACAGTCCTTCAAATTGACCGCACCGCCTAC
CCTTTCAGCTTGGATTGGGGCTGCCGAGTCCCGACGGGGATTGCCTCAAT
GGGGAGTCATCGTCGCCCAGATGGAGTATCACGCAAAGCTTGATCATATC
TTCTCCCTGACATGGAGAGAGAACTCTTCATCGCCTCCTAAAAAGGCCGT
ATGTGTCTCTGACAGCTCCTCCAACCGGCCAGCAGACACCATGAAGGCCC
TCAAGGACGAGTACGATTTGGGGTATCGCAATATCGAGGACCCAAAGGAA
CCCTCGACCCGACCGTTGTCAACCTCCAGACCATTGCTTCTGCAGAATCA
GACCTCCAAATTCTGGTTGTCAGGCTGGACCTGGGAGATCCTGAGCTGTG
TAATTGCCGTGACGGCTCTGGTCGCCATCATCATCGTCCTCTACAACTAC
GATAACCGGCCCATGCCGGACTGGCCATATGGCATCACTCTCAATGCTGT
AGTCTCCGTGCTGGTGACCCTAATGAAAGCGGCCATGATCTTCCCGATTA
CCGAGGGACTGTCGCAGTTGAAATGGTCCTGGTTCAACGAGCGCAACCAA
TTGAGTGACCTGTCACTACTGGACGCGGCCAGTCGTGGAGCTTTCAGCGC
CACATTTGTTCTCTTCGGCTTTCTTCCTCGGTATGTCCCTCTCACCAGGA
TTAAACTTGCAACAAAATATGGCTCTAACAGGTAAGTAGTCACTTGGTAT
CTATCGGATGCTTTATCATGGTGGTTGCCGCGGCCATTGCGCCGTTTGTC
CAGCAAGTCATCAACATCACCTCGCAGCCCGTCCACTCGCCCGATCCCTC
CGCCATCCAAGTCTGCAATACAAGCAGCTATGTCGACTATGGCGAAGGCT
CTGGGCCAGGTCTGAACAAGGTTCCTCTATCCACAACCGGGGCCATCTAC
ACCGGTATTTTTCAAAGTGAGGGCCCAGACAGCAACACGGTTACCATGAC
GTGTCCCACAGGAAACTGTACTTTCACTCCTTATCAATCGCTAGGGTTTT
GCAGTCGCTGCGCCAACATCACAGACAGCCTCACCCTGCACAAAACATCG
GTTACCAGTACCATGGCCACTTACAATTACACCCTACCCAACGGATTCAG
CTTCGAGACCTCCTGGGGCATGATGTATTTGATGAACGCCACCAACAACC
TGAACCTCGTTAAACTCAACACCGAGAACTTGCCCGTTATACTGAACTTC
ACCGCCATCAGCGCCGCTGGCTACGGCGTGCCACCACAAATCAGCGCAAC
CGAATGCGCCCTCTATTTCTGCGTCAAGACATACGAAGCCTCGGTCCACA
AGGGCCGCTATAACGAAACCCTCGTATCGACAGCATCATCCTCAAACTAC
TCCGCCACATCAGTGACCAGCGACATCTCCCTCACCCCCGACACCTGCTA
CGTGAACGGCACGCAGCGCTCCGACCGCACAGACTGCACCTACAACGTGA
GCTGGCTCAGCCGACTCGCCATGTCCAATTCCCTCACGCCCCTGCTGAAA
GGTAAGGGTTCACTCTTCGTCAGCAACCGGCCCGACTGGTCCTCAGACAC
CATGCACGCCGTCTATGGCGTGGAGGGCAATTATACGGATATCAACTCGA
TGTTCCAATCACTCGCAGGGGCGCTGACAACACACGCGCGCAACGCCGTG
TGCAAGGCGTCAGTAAAGGGCACGACCTGGACCGTTGAGTCCTTCGTGCA
CGTCAAGTGGCCGTGGATGATTCTTCCGATCGCCTTGATGGTCCTGACCC
TTGTCTTCCTCGTTACAACGGTAGTCCGGACCCGGAACCAGTTCATTTGG
AAGTCGTCGCCGCTCGCATTGCTATTCTCGGATGTGGCTGTTGAGGCACC
ACACGCGTTCGAGCGCAGTCCGGATTTATCCCATATGGAGGAGGCATCGC
GCAAGATGAAGGTGTGGTTGGAGACGACGACGGGAGGGGCAAGGTTGAAG
GCTGTGGTGGGATGATACTGTATGATGAGATATTTTATATACCCTGTATA
CTAGTAATAATGTGTATAATATGCGAAAAGAAACGGTATAATGATTGTGA
back to topCoding sequence (CDS) from alignment at ch8:4727303..4729402- >KJC3_012846-T1 ID=KJC3_012846-T1|Name=KJC3_012846-T1|organism=Aspergillus niger KJC3|type=CDS|length=3912bp|location=Sequence derived from alignment at ch8:4727303..4729402- (Aspergillus niger KJC3)
TCACTTGGTATCTATCGGATGCTTTATCATGGTGGTTGCCGCGGCCATTG
CGCCGTTTGTCCAGCAAGTCATCAACATCACCTCGCAGCCCGTCCACTCG
CCCGATCCCTCCGCCATCCAAGTCTGCAATACAAGCAGCTATGTCGACTA
TGGCGAAGGCTCTGGGCCAGGTCTGAACAAGGTTCCTCTATCCACAACCG
GGGCCATCTACACCGGTATTTTTCAAAGTGAGGGCCCAGACAGCAACACG
GTTACCATGACGTGTCCCACAGGAAACTGTACTTTCACTCCTTATCAATC
GCTAGGGTTTTGCAGTCGCTGCGCCAACATCACAGACAGCCTCACCCTGC
ACAAAACATCGGTTACCAGTACCATGGCCACTTACAATTACACCCTACCC
AACGGATTCAGCTTCGAGACCTCCTGGGGCATGATGTATTTGATGAACGC
CACCAACAACCTGAACCTCGTTAAACTCAACACCGAGAACTTGCCCGTTA
TACTGAACTTCACCGCCATCAGCGCCGCTGGCTACGGCGTGCCACCACAA
ATCAGCGCAACCGAATGCGCCCTCTATTTCTGCGTCAAGACATACGAAGC
CTCGGTCCACAAGGGCCGCTATAACGAAACCCTCGTATCGACAGCATCAT
CCTCAAACTACTCCGCCACATCAGTGACCAGCGACATCTCCCTCACCCCC
GACACCTGCTACGTGAACGGCACGCAGCGCTCCGACCGCACAGACTGCAC
CTACAACGTGAGCTGGCTCAGCCGACTCGCCATGTCCAATTCCCTCACGC
CCCTGCTGAAAGGTAAGGGTTCACTCTTCGTCAGCAACCGGCCCGACTGG
TCCTCAGACACCATGCACGCCGTCTATGGCGTGGAGGGCAATTATACGGA
TATCAACTCGATGTTCCAATCACTCGCAGGGGCGCTGACAACACACGCGC
GCAACGCCGTGTGCAAGGCGTCAGTAAAGGGCACGACCTGGACCGTTGAG
TCCTTCGTGCACGTCAAGTGGCCGTGGATGATTCTTCCGATCGCCTTGAT
GGTCCTGACCCTTGTCTTCCTCGTTACAACGGTAGTCCGGACCCGGAACC
AGTTCATTTGGAAGTCGTCGCCGCTCGCATTGCTATTCTCGGATGTGGCT
GTTGAGGCACCACACGCGTTCGAGCGCAGTCCGGATTTATCCCATATGGA
GGAGGCATCGCGCAAGATGAAGGTGTGGTTGGAGACGACGACGGGAGGGG
CAAGGTTGAAGGCTGTGGTGGGATGAATGTGGTTAAGGAATGTTTCACAG
TCCTTCAAATTGACCGCACCGCCTACCCTTTCAGCTTGGATTGGGGCTGC
CGAGTCCCGACGGGGATTGCCTCAATGGGGAGTCATCGTCGCCCAGATGG
AGTATCACGCAAAGCTTGATCATATCTTCTCCCTGACATGGAGAGAGAAC
TCTTCATCGCCTCCTAAAAAGGCCGTATGTGTCTCTGACAGCTCCTCCAA
CCGGCCAGCAGACACCATGAAGGCCCTCAAGGACGAGTACGATTTGGGGT
ATCGCAATATCGAGGACCCAAAGGAACCCTCGACCCGACCGTTGTCAACC
TCCAGACCATTGCTTCTGCAGAATCAGACCTCCAAATTCTGGTTGTCAGG
CTGGACCTGGGAGATCCTGAGCTGTGTAATTGCCGTGACGGCTCTGGTCG
CCATCATCATCGTCCTCTACAACTACGATAACCGGCCCATGCCGGACTGG
CCATATGGCATCACTCTCAATGCTGTAGTCTCCGTGCTGGTGACCCTAAT
GAAAGCGGCCATGATCTTCCCGATTACCGAGGGACTGTCGCAGTTGAAAT
GGTCCTGGTTCAACGAGCGCAACCAATTGAGTGACCTGTCACTACTGGAC
GCGGCCAGTCGTGGAGCTTTCAGCGCCACATTTGTTCTCTTCGGCTTTCT
TCCTCGTCACTTGGTATCTATCGGATGCTTTATCATGGTGGTTGCCGCGG
CCATTGCGCCGTTTGTCCAGCAAGTCATCAACATCACCTCGCAGCCCGTC
CACTCGCCCGATCCCTCCGCCATCCAAGTCTGCAATACAAGCAGCTATGT
CGACTATGGCGAAGGCTCTGGGCCAGGTCTGAACAAGGTTCCTCTATCCA
CAACCGGGGCCATCTACACCGGTATTTTTCAAAGTGAGGGCCCAGACAGC
AACACGGTTACCATGACGTGTCCCACAGGAAACTGTACTTTCACTCCTTA
TCAATCGCTAGGGTTTTGCAGTCGCTGCGCCAACATCACAGACAGCCTCA
CCCTGCACAAAACATCGGTTACCAGTACCATGGCCACTTACAATTACACC
CTACCCAACGGATTCAGCTTCGAGACCTCCTGGGGCATGATGTATTTGAT
GAACGCCACCAACAACCTGAACCTCGTTAAACTCAACACCGAGAACTTGC
CCGTTATACTGAACTTCACCGCCATCAGCGCCGCTGGCTACGGCGTGCCA
CCACAAATCAGCGCAACCGAATGCGCCCTCTATTTCTGCGTCAAGACATA
CGAAGCCTCGGTCCACAAGGGCCGCTATAACGAAACCCTCGTATCGACAG
CATCATCCTCAAACTACTCCGCCACATCAGTGACCAGCGACATCTCCCTC
ACCCCCGACACCTGCTACGTGAACGGCACGCAGCGCTCCGACCGCACAGA
CTGCACCTACAACGTGAGCTGGCTCAGCCGACTCGCCATGTCCAATTCCC
TCACGCCCCTGCTGAAAGGTAAGGGTTCACTCTTCGTCAGCAACCGGCCC
GACTGGTCCTCAGACACCATGCACGCCGTCTATGGCGTGGAGGGCAATTA
TACGGATATCAACTCGATGTTCCAATCACTCGCAGGGGCGCTGACAACAC
ACGCGCGCAACGCCGTGTGCAAGGCGTCAGTAAAGGGCACGACCTGGACC
GTTGAGTCCTTCGTGCACGTCAAGTGGCCGTGGATGATTCTTCCGATCGC
CTTGATGGTCCTGACCCTTGTCTTCCTCGTTACAACGGTAGTCCGGACCC
GGAACCAGTTCATTTGGAAGTCGTCGCCGCTCGCATTGCTATTCTCGGAT
GTGGCTGTTGAGGCACCACACGCGTTCGAGCGCAGTCCGGATTTATCCCA
TATGGAGGAGGCATCGCGCAAGATGAAGGTGTGGTTGGAGACGACGACGG
GAGGGGCAAGGTTGAAGGCTGTGGTGGGATGAATGTGGTTAAGGAATGTT
TCACAGTCCTTCAAATTGACCGCACCGCCTACCCTTTCAGCTTGGATTGG
GGCTGCCGAGTCCCGACGGGGATTGCCTCAATGGGGAGTCATCGTCGCCC
AGATGGAGTATCACGCAAAGCTTGATCATATCTTCTCCCTGACATGGAGA
GAGAACTCTTCATCGCCTCCTAAAAAGGCCGTATGTGTCTCTGACAGCTC
CTCCAACCGGCCAGCAGACACCATGAAGGCCCTCAAGGACGAGTACGATT
TGGGGTATCGCAATATCGAGGACCCAAAGGAACCCTCGACCCGACCGTTG
TCAACCTCCAGACCATTGCTTCTGCAGAATCAGACCTCCAAATTCTGGTT
GTCAGGCTGGACCTGGGAGATCCTGAGCTGTGTAATTGCCGTGACGGCTC
TGGTCGCCATCATCATCGTCCTCTACAACTACGATAACCGGCCCATGCCG
GACTGGCCATATGGCATCACTCTCAATGCTGTAGTCTCCGTGCTGGTGAC
CCTAATGAAAGCGGCCATGATCTTCCCGATTACCGAGGGACTGTCGCAGT
TGAAATGGTCCTGGTTCAACGAGCGCAACCAATTGAGTGACCTGTCACTA
CTGGACGCGGCCAGTCGTGGAGCTTTCAGCGCCACATTTGTTCTCTTCGG
CTTTCTTCCTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012846-T1.utr3p1 | KJC3_012846-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021514 |
| DBxref | PFAM:PF11374 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4727303..4729402 - |
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