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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4731701..4732996- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012847-T1 ID=KJC3_012847-T1|Name=KJC3_012847-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1296bp|location=Sequence derived from alignment at ch8:4731701..4732996- (Aspergillus niger KJC3)
CACAAGTTTCGCTGGTCCTCCAAAGCATCTAAAATCTCCCTTTCGACTAC
CTTCCCAACAGGCCGCCATGCACAGTATTGTTATCCTTGGCGGGAACTTT
GCCGGCGTTAGCACCGCACAGTACCTCCTCAAGCACGTCTTGCCCGTAGT
CAAGAACGAAGAATCGCAATACAAGGTTACGCTCGTGTCGCCGTCCGCTC
AAACCTTCTTTAAGGTGGCAGTCCCGCGAGTCTTGGTATCGGACAAGGTC
CCAAACGACAAGCTGTTTGCTTCCATCCCCAATGCTTTCCGCCAGTACAA
CTCGGACGACTTCACCTTTATCCAAGGCGAGGCGGTCGGACTAGACGAGA
CGGCTAAGACAGTGTCCATCAAGAGCGTTGGAGCTGCGGACCGCTTGATT
GGGTATCACTCTTTAGTCATTGCTACAGGGACCACCAGTGTACGTACTCT
CGACGCCTTACGCCCATTTTGATACTAACCCCCAGCACACAGCCTAGCGC
AGTATGGACGCTGCACGGCGATCACGAAATTACCCTCGCCGCATTTCAGG
ACCTCCAAGCACGACTCCCGACCTCGAAAACAATTCTCATAGCAGGAGGC
GGTCCCACAGGCGTCGAAACAGCAGGCGAGATAGCAAGCCAGCACAAGGA
CAAAGAAGTCACTCTCCTATCTGGAGGCACGCGTCTGCTGCCGAGGTTGC
GGAATAAAAAGATTGCGCCGAGGGCAGAGCAACAGTTGGCAGCGCTGAAC
GTGCGGACATTGCACGGCGTGCGCGTCACGTCGTCAACTATGTCGGCTGA
CAAGGTGTCGTTGGTGTTGAGCGACGGCACCACTAGGACTGTCGACTTGT
ACATTGACACGACGGGCAGCACACCAAACACCAGCTTTCTACCGCCATCG
TGGCTTGATGGCAGCAAACACGTTGCCGTGGACGGGGCCACGCTTCGCGC
CACCAATGCTCCCGATGGTGTGTACGCGATAGGAGATGTAGCGTCTTATT
CTAACGGAGGCATCCCGGACGCTGTTTGGTCTGTTCCCGCGCTGAGGTAT
TCCATCTGGTCCGACCTACGCGTTGCTGCCACTAGGGACGGATCCATGAA
GGGCGCTGCACCGCTATTGAAGGAGAATAAGTACAAGCAGATCGAGGAGG
ACATGAGCATTGTTCCCATAGGACCATCCGGTGGTGTTGGGGCGCTGTTT
GGGTGGGCTGTTCCTAGCTGGTTTGTGTGGTTGTTGAAATCGAGGACGTT
TATGATGGATAGTGCGCCCAAGGTTGCTACTGGTTATTAGGTGTCA back to topCoding sequence (CDS) from alignment at ch8:4731701..4732996- >KJC3_012847-T1 ID=KJC3_012847-T1|Name=KJC3_012847-T1|organism=Aspergillus niger KJC3|type=CDS|length=2340bp|location=Sequence derived from alignment at ch8:4731701..4732996- (Aspergillus niger KJC3)
CCTAGCGCAGTATGGACGCTGCACGGCGATCACGAAATTACCCTCGCCGC
ATTTCAGGACCTCCAAGCACGACTCCCGACCTCGAAAACAATTCTCATAG
CAGGAGGCGGTCCCACAGGCGTCGAAACAGCAGGCGAGATAGCAAGCCAG
CACAAGGACAAAGAAGTCACTCTCCTATCTGGAGGCACGCGTCTGCTGCC
GAGGTTGCGGAATAAAAAGATTGCGCCGAGGGCAGAGCAACAGTTGGCAG
CGCTGAACGTGCGGACATTGCACGGCGTGCGCGTCACGTCGTCAACTATG
TCGGCTGACAAGGTGTCGTTGGTGTTGAGCGACGGCACCACTAGGACTGT
CGACTTGTACATTGACACGACGGGCAGCACACCAAACACCAGCTTTCTAC
CGCCATCGTGGCTTGATGGCAGCAAACACGTTGCCGTGGACGGGGCCACG
CTTCGCGCCACCAATGCTCCCGATGGTGTGTACGCGATAGGAGATGTAGC
GTCTTATTCTAACGGAGGCATCCCGGACGCTGTTTGGTCTGTTCCCGCGC
TGAGGTATTCCATCTGGTCCGACCTACGCGTTGCTGCCACTAGGGACGGA
TCCATGAAGGGCGCTGCACCGCTATTGAAGGAGAATAAGTACAAGCAGAT
CGAGGAGGACATGAGCATTGTTCCCATAGGACCATCCGGTGGTGTTGGGG
CGCTGTTTGGGTGGGCTGTTCCTAGCTGGTTTGTGTGGTTGTTGAAATCG
AGGACGTTTATGATGGATAGTGCGCCCAAGGTTGCTACTGGTTATTAGAT
GCACAGTATTGTTATCCTTGGCGGGAACTTTGCCGGCGTTAGCACCGCAC
AGTACCTCCTCAAGCACGTCTTGCCCGTAGTCAAGAACGAAGAATCGCAA
TACAAGGTTACGCTCGTGTCGCCGTCCGCTCAAACCTTCTTTAAGGTGGC
AGTCCCGCGAGTCTTGGTATCGGACAAGGTCCCAAACGACAAGCTGTTTG
CTTCCATCCCCAATGCTTTCCGCCAGTACAACTCGGACGACTTCACCTTT
ATCCAAGGCGAGGCGGTCGGACTAGACGAGACGGCTAAGACAGTGTCCAT
CAAGAGCGTTGGAGCTGCGGACCGCTTGATTGGGTATCACTCTTTAGTCA
TTGCTACAGGGACCACCAGTCCTAGCGCAGTATGGACGCTGCACGGCGAT
CACGAAATTACCCTCGCCGCATTTCAGGACCTCCAAGCACGACTCCCGAC
CTCGAAAACAATTCTCATAGCAGGAGGCGGTCCCACAGGCGTCGAAACAG
CAGGCGAGATAGCAAGCCAGCACAAGGACAAAGAAGTCACTCTCCTATCT
GGAGGCACGCGTCTGCTGCCGAGGTTGCGGAATAAAAAGATTGCGCCGAG
GGCAGAGCAACAGTTGGCAGCGCTGAACGTGCGGACATTGCACGGCGTGC
GCGTCACGTCGTCAACTATGTCGGCTGACAAGGTGTCGTTGGTGTTGAGC
GACGGCACCACTAGGACTGTCGACTTGTACATTGACACGACGGGCAGCAC
ACCAAACACCAGCTTTCTACCGCCATCGTGGCTTGATGGCAGCAAACACG
TTGCCGTGGACGGGGCCACGCTTCGCGCCACCAATGCTCCCGATGGTGTG
TACGCGATAGGAGATGTAGCGTCTTATTCTAACGGAGGCATCCCGGACGC
TGTTTGGTCTGTTCCCGCGCTGAGGTATTCCATCTGGTCCGACCTACGCG
TTGCTGCCACTAGGGACGGATCCATGAAGGGCGCTGCACCGCTATTGAAG
GAGAATAAGTACAAGCAGATCGAGGAGGACATGAGCATTGTTCCCATAGG
ACCATCCGGTGGTGTTGGGGCGCTGTTTGGGTGGGCTGTTCCTAGCTGGT
TTGTGTGGTTGTTGAAATCGAGGACGTTTATGATGGATAGTGCGCCCAAG
GTTGCTACTGGTTATTAGATGCACAGTATTGTTATCCTTGGCGGGAACTT
TGCCGGCGTTAGCACCGCACAGTACCTCCTCAAGCACGTCTTGCCCGTAG
TCAAGAACGAAGAATCGCAATACAAGGTTACGCTCGTGTCGCCGTCCGCT
CAAACCTTCTTTAAGGTGGCAGTCCCGCGAGTCTTGGTATCGGACAAGGT
CCCAAACGACAAGCTGTTTGCTTCCATCCCCAATGCTTTCCGCCAGTACA
ACTCGGACGACTTCACCTTTATCCAAGGCGAGGCGGTCGGACTAGACGAG
ACGGCTAAGACAGTGTCCATCAAGAGCGTTGGAGCTGCGGACCGCTTGAT
TGGGTATCACTCTTTAGTCATTGCTACAGGGACCACCAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012847-T1.utr3p1 | KJC3_012847-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012847-T1.utr5p1 | KJC3_012847-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR023753 |
| DBxref | PFAM:PF07992 |
| DBxref | PFAM:PF00070 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4731701..4732996 - |
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