|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4733459..4735113+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012848-T1 ID=KJC3_012848-T1|Name=KJC3_012848-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1655bp|location=Sequence derived from alignment at ch8:4733459..4735113+ (Aspergillus niger KJC3)
CAGGAGTTCAGTCGCTTTATGGCAACATGGCTGTTCCAACCGAGCCGACC
GAGCTGCTACATTACATACCACAGCATCGCGTGCTCATATGCAAGGAATG
TCAATATGCGATTCAACCATCTGCCATCCCCCGCCACCTGAAGGAGATGC
ACAAGATATACCGGTCTCACCGGCAGAGATACATCGATTATACCGACCAG
CTGGACCTCGCCAAACCGGACCATGTCATTCTTCCTGAGGCCAATGAGGG
TCCTATCCCTTTCTTGCCCATCATCGACGGCCTTGCCTGTGGGGCCAGCG
GGTGTCACCACCTCTGTGCCACGGGGAAACGGATGAAGATGCACTGCAAT
GCGGAACATCCTGGAGTCCCAGTGGTAGATCTCAAGGGCAGCCCAGTTCA
GATGCAGACCTTTTTCCGCGGCAACCAGTTGAGATACTTTGTAGTGCACC
AACCGCAAACGAACTCTCATCCTGAGCAACACGCAGCTGTCGAAAACAAA
GAGCCCACTCCCGTGACCTCGCCAAGCTGCGACCTTCAAGAACTAGCCGC
TGAAGACGTCAGGCTTCTCGAGCACTTCCAAACCTCTTTGTCCCGCGAGC
TCGCATTCGACGCAATTATGACGCCCTGTTGGGACACAGCGGAATCAGGC
GTATTAGCCAGATATTCTTTCCTAAAACACGGCATTCTCTCCTGCTCGGC
GTTACACCTCGCGTTCCTCAACCCCTCTAAGCGTCAACGGTACCGTCTCA
TGGCAGCCCACCACCAGAACATTGCTCTCCCAGACTTCCGCTCCGCGGTG
AAGCAGCCCACCGTCGACAACTGCGTCTCGCTGCTGGCCTTTACGCAGCT
TCTCATCGTGCACTGCTTCGGCGCATCGCAGGATGAGGACGGCGACGATG
ACCTCCTGCTCGCGCACGGACATAATGACCCATTTCCGGACTGGCTGCAG
GTTCTCCGGAGCACTTGCCACATATTTAAACCTATAGAGGGTTACGTCCG
AACGCTCCCCATTGCCATGATCATGGCCGAAGATGATCACCAAGGCAAAA
TCTCCGCCAAGTCATATTGTGACCCACGACTCGACAAACTCTTCAATTTA
GTCAATCCCGACGCATCAAAACAAGCAGGCGAACCATTTGAGGTTCATCA
CTCCCCTCTGCTATCGGCGCTAACCCTCCTCTCGAGTGCTTTTTCCAGGG
CACACGAAGCCCAAGCGCGGAATAACTATTCGTTGTGTGTAGCACTACAT
GTATGGCCAGTACGAGTTCCGGATGCTTACCTAGGGCTTGTGAGACAGAG
GCATCCTGTCGCGCTTGTCCTGCTGGCGCATTATTGCATATTGCTTCTAC
CGCTCGAGGGATCCTGGTACATGAACGGGTATAGTAAGAGGCTGATCACT
CGCATTTCCGATCAGCTAGGTAAACAGTGGCGACCATGGTTACAGTGGCC
GTTGGAAGAAGTTGGATTGTATTATAGTCCTTACACTTGTCATTGCCTAG
GACCCGATGCTGGGATTGGAAGACGCAGTATTTCGGATGTCAAGTCTTCA
TTGTACTGACGGGACAGTCTAGTTATCCCAAAATTAATTCATTTCTGTAG
TGCCCCTTTGCAATTCACAGAAGCTGAGCCTGGGGCTCGCTGAGCAACGC
AGGTC back to topCoding sequence (CDS) from alignment at ch8:4733459..4735113+ >KJC3_012848-T1 ID=KJC3_012848-T1|Name=KJC3_012848-T1|organism=Aspergillus niger KJC3|type=CDS|length=1533bp|location=Sequence derived from alignment at ch8:4733459..4735113+ (Aspergillus niger KJC3)
ATGGCTGTTCCAACCGAGCCGACCGAGCTGCTACATTACATACCACAGCA
TCGCGTGCTCATATGCAAGGAATGTCAATATGCGATTCAACCATCTGCCA
TCCCCCGCCACCTGAAGGAGATGCACAAGATATACCGGTCTCACCGGCAG
AGATACATCGATTATACCGACCAGCTGGACCTCGCCAAACCGGACCATGT
CATTCTTCCTGAGGCCAATGAGGGTCCTATCCCTTTCTTGCCCATCATCG
ACGGCCTTGCCTGTGGGGCCAGCGGGTGTCACCACCTCTGTGCCACGGGG
AAACGGATGAAGATGCACTGCAATGCGGAACATCCTGGAGTCCCAGTGGT
AGATCTCAAGGGCAGCCCAGTTCAGATGCAGACCTTTTTCCGCGGCAACC
AGTTGAGATACTTTGTAGTGCACCAACCGCAAACGAACTCTCATCCTGAG
CAACACGCAGCTGTCGAAAACAAAGAGCCCACTCCCGTGACCTCGCCAAG
CTGCGACCTTCAAGAACTAGCCGCTGAAGACGTCAGGCTTCTCGAGCACT
TCCAAACCTCTTTGTCCCGCGAGCTCGCATTCGACGCAATTATGACGCCC
TGTTGGGACACAGCGGAATCAGGCGTATTAGCCAGATATTCTTTCCTAAA
ACACGGCATTCTCTCCTGCTCGGCGTTACACCTCGCGTTCCTCAACCCCT
CTAAGCGTCAACGGTACCGTCTCATGGCAGCCCACCACCAGAACATTGCT
CTCCCAGACTTCCGCTCCGCGGTGAAGCAGCCCACCGTCGACAACTGCGT
CTCGCTGCTGGCCTTTACGCAGCTTCTCATCGTGCACTGCTTCGGCGCAT
CGCAGGATGAGGACGGCGACGATGACCTCCTGCTCGCGCACGGACATAAT
GACCCATTTCCGGACTGGCTGCAGGTTCTCCGGAGCACTTGCCACATATT
TAAACCTATAGAGGGTTACGTCCGAACGCTCCCCATTGCCATGATCATGG
CCGAAGATGATCACCAAGGCAAAATCTCCGCCAAGTCATATTGTGACCCA
CGACTCGACAAACTCTTCAATTTAGTCAATCCCGACGCATCAAAACAAGC
AGGCGAACCATTTGAGGTTCATCACTCCCCTCTGCTATCGGCGCTAACCC
TCCTCTCGAGTGCTTTTTCCAGGGCACACGAAGCCCAAGCGCGGAATAAC
TATTCGTTGTGTGTAGCACTACATGTATGGCCAGTACGAGTTCCGGATGC
TTACCTAGGGCTTGTGAGACAGAGGCATCCTGTCGCGCTTGTCCTGCTGG
CGCATTATTGCATATTGCTTCTACCGCTCGAGGGATCCTGGTACATGAAC
GGGTATAGTAAGAGGCTGATCACTCGCATTTCCGATCAGCTAGGTAAACA
GTGGCGACCATGGTTACAGTGGCCGTTGGAAGAAGTTGGATTGTATTATA
GTCCTTACACTTGTCATTGCCTAGGACCCGATGCTGGGATTGGAAGACGC
AGTATTTCGGATGTCAAGTCTTCATTGTACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012848-T1.utr5p1 | KJC3_012848-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012848-T1.utr3p1 | KJC3_012848-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022698 |
| DBxref | PFAM:PF12013 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4733459..4735113 + |
|
