You are here

Home

KJC3_012851-T1, KJC3_012851-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012851-T1
Unique NameKJC3_012851-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4758108..4759732-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012851-T1 ID=KJC3_012851-T1|Name=KJC3_012851-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1625bp|location=Sequence derived from alignment at ch8:4758108..4759732- (Aspergillus niger KJC3)
CGTGCTTACGGGACTAGTAGGGGGGGAATTATGTGACAGGTACGGTGCAC
TCTTCTCGTACGCTTCGATTTGCAAGACTCGAGGGGTTAGCCTTGACCAA
CTGGCACCTTGATAGACGCGTTTGGCGTATTTAACTTATCCGACGGCAGA
AGGCCACCTTCTATGCCAAATGCTGCATGGTCACCAGAGCAAGCATACCG
GAAAGTATTGGCCTGGTGTGCGGTGATTGTTTTGGCGGACTCTGTCACAG
ATCTCACGTTGGGCTGGTGTCGTGAAAGGATTAGGATCCCTCTAGTACTT
CTAGGCGCACGCTAACATCGCACTAGGTGCTAGTTATGGTAGGGATCCTA
GTCGAAGCCGGAAGATCCAGCGATCAGGCTCCAAGATACTGAAATCGTGT
ATCGTTGCCTCTGTATGGCAACAGAGAAAGCGATAATATACACCGCGGGA
CCGGGAGGCTCCATATTGGGCTAGATAGCCATTGGATCAACTGCGCTCCA
GATGAGCCTCACCCCAGTCGCATAGTAGATAGATAAGCAACTGATCCCGG
CGTTGTCCGCAAGCATGGGTGCCTCGCACTAAAAGGAAGGCGATGTAACT
GTACTGCATGGTGGCGGTCAGAAAACGAAAACCAAATCCATGGCAGATCT
TAGCGGAGCAGACACAAGGCCTAGGGGAAGATAGACCAAGGTAAGAAGTG
GGATCTGGAGCGCTTCTTCCCAATCAGACGCCTAATACCGGGATAGAGGC
AACAGCGGCCATTCACCACGTTGGAAAAGGCTAGTCAGGATATAGTTTAA
TAGCGGCGAATCCGCAGCCTGACAGTCAGATGGAAAAACTATCGAAAGTG
GACGGTGTTAGCGAATCGAAATTTTACATCGCTAATCAACATGGCGACAG
AGTCACCAACCTCCCGGTTCACCGCCGAGATGCTTGTGACCTTGGAGATG
TTTAAGGATTCGCAGTGGGAGGAACCGGTCCCCGTTAGTCTCTTCTGGAA
TGGTATAGACTACTCGATCGCTCGCAATTTTCCCGGCAACTTTACACAGG
CTGAATTGGCACAGCTGCCCATCGACCAGGAGAGCACCGCTGACCAGCAC
TCTAAGCTCATACTCCTGCTACGACTCCTGCAGGAGAAACTGGATCAGGA
AGAAGCAGCCACTTCCCCCCCGGGCAGCCTCTACACCAGCAACTACCAGC
AGTGGTACCGACTATGGCAAGGGATTTACGCCCTTCAGGACGAGTTGAAC
CTTCCCGAAGCGGAACAGACCGTTCGAATGCTGGTGGACAAGACACCATA
TAAATCGAACCCAGTGCCGTCGCATATGCTAGCGGAGCACCTGGTAAAGG
TTGGGAAGTACGAGGAGGCAGAGTGGACCGAGAGACCGATTTGCGCATGG
ATGGATGCCCGGCCGCATTTAGGGCCGTCCTCCCCACAGGCGCTCAACGC
TCGTCGGCTTATCGCTCAAGCCGTGTGGGGACAAGGACCGTCGAGGCGCT
CGGAAGCCGAAGCTCTAATAGCCGAGATTCACTGGATCGTTGAGGAGATG
GGCGAAGGGCAGTTTGCAGTTTACCAGGCGGAAGAGAGAAGGCTGAACCG
AGAGATGATGGCCACTCTCCGATGA
back to top

Coding sequence (CDS) from alignment at ch8:4758108..4759732-

>KJC3_012851-T1 ID=KJC3_012851-T1|Name=KJC3_012851-T1|organism=Aspergillus niger KJC3|type=CDS|length=1128bp|location=Sequence derived from alignment at ch8:4758108..4759732- (Aspergillus niger KJC3)
CTGCCCATCGACCAGGAGAGCACCGCTGACCAGCACTCTAAGCTCATACT
CCTGCTACGACTCCTGCAGGAGAAACTGGATCAGGAAGAAGCAGCCACTT
CCCCCCCGGGCAGCCTCTACACCAGCAACTACCAGCAGTGGTACCGACTA
TGGCAAGGGATTTACGCCCTTCAGGACGAGTTGAACCTTCCCGAAGCGGA
ACAGACCGTTCGAATGCTGGTGGACAAGACACCATATAAATCGAACCCAG
TGCCGTCGCATATGCTAGCGGAGCACCTGGTAAAGGTTGGGAAGTACGAG
GAGGCAGAGTGGACCGAGAGACCGATTTGCGCATGGATGGATGCCCGGCC
GCATTTAGGGCCGTCCTCCCCACAGGCGCTCAACGCTCGTCGGCTTATCG
CTCAAGCCGTGTGGGGACAAGGACCGTCGAGGCGCTCGGAAGCCGAAGCT
CTAATAGCCGAGATTCACTGGATCGTTGAGGAGATGGGCGAAGGGCAGTT
TGCAGTTTACCAGGCGGAAGAGAGAAGGCTGAACCGAGAGATGATGGCCA
CTCTCCGATGAATGCTGCCCATCGACCAGGAGAGCACCGCTGACCAGCAC
TCTAAGCTCATACTCCTGCTACGACTCCTGCAGGAGAAACTGGATCAGGA
AGAAGCAGCCACTTCCCCCCCGGGCAGCCTCTACACCAGCAACTACCAGC
AGTGGTACCGACTATGGCAAGGGATTTACGCCCTTCAGGACGAGTTGAAC
CTTCCCGAAGCGGAACAGACCGTTCGAATGCTGGTGGACAAGACACCATA
TAAATCGAACCCAGTGCCGTCGCATATGCTAGCGGAGCACCTGGTAAAGG
TTGGGAAGTACGAGGAGGCAGAGTGGACCGAGAGACCGATTTGCGCATGG
ATGGATGCCCGGCCGCATTTAGGGCCGTCCTCCCCACAGGCGCTCAACGC
TCGTCGGCTTATCGCTCAAGCCGTGTGGGGACAAGGACCGTCGAGGCGCT
CGGAAGCCGAAGCTCTAATAGCCGAGATTCACTGGATCGTTGAGGAGATG
GGCGAAGGGCAGTTTGCAGTTTACCAGGCGGAAGAGAGAAGGCTGAACCG
AGAGATGATGGCCACTCTCCGATGAATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012851KJC3_012851Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012851-T1KJC3_012851-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012851-T1.cdsKJC3_012851-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012851-T1.exon3KJC3_012851-T1.exon3Aspergillus niger KJC3exon
KJC3_012851-T1.exon2KJC3_012851-T1.exon2Aspergillus niger KJC3exon
KJC3_012851-T1.exon1KJC3_012851-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012851-T1.utr5p2KJC3_012851-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012851-T1.utr5p1KJC3_012851-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4758108..4759732 -
Powered by Drupal