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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4762778..4766508+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012852-T1 ID=KJC3_012852-T1|Name=KJC3_012852-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3731bp|location=Sequence derived from alignment at ch8:4762778..4766508+ (Aspergillus niger KJC3)
CAAATCACATCGAAGGCACACATTGCGCGATGAAGACTCTGCACTCTATT
GCGTCAAACACGCATACCATTATACCTGAAGCATCACCTCGTGTCCTATA
CGAGTCGTTAAACTTTTCTTCCTCTATACTGCCCACTTTTCATTTCTTCT
ACACTCCCGTTCTTGCTCGATCTCCACCGCTTCATACCGACAAACCTCCG
GCTTTCAGTTTCTTCTTACGGTAAAACCAAAGCACCCCACGAGCAAGCTA
GATTCCACACCAGATAACTTCAGTCAAGTCAACAGAACCTCAGTGGGTCT
CAAGTTGAAGATCGGCAGTATCATAACCTCGTTGCGAGAACTCGGGGGAA
ATCTCGGGGAATCCGCGCTGAATCTGCCCCCGCGAACCCTAAGCGGACTT
CCTCCGCAATCCTCAATTTCCCCGAGGATACGGACTATTCATCCAGCATT
CCAACTATACTAGTTCTAGTGATCGGAAATTCCCCGACACCCCTGCATCA
ACAGAAGCATACCATATATAATGTCACTTTTTCCCCTCTGCCAAGGGAGG
GGAAGTGAGTGTCCCCTCCTCTGCTATTCCTCGCCATGAAGCTTCAAACG
GCTTCCGTACTGCTCGGCAGTGCTGCTGCTGCCTCGCCTTCCATGCAGAC
GCGGGCCTCCGTTGTCATCGACTACAATGTCGCACCTCCAAACCTATCCA
CTCTGCCCAATGGCTCCCTCTTCGAAACATGGCGTCCCCGCGCCCACGTC
CTGCCCCCCAACGGCCAGATCGGTGACCCCTGCCTGCATTACACCGATCC
CTCCACGGGCCTCTTCCACGTCGGCTTCCTTCACGATGGCAGCGGCATCT
CCAGCGCCACCACTGATGATCTAGCCACCTACAAGGACCTCAACCAAGGC
AACCAAGTCATTGTTCCCGGGGGTATCAACGACCCCGTCGCCGTCTTCGA
TGGCTCCGTCATCCCCAGCGGCATCAACGGCCTCCCCACTCTCCTCTACA
CCTCCGTCTCCTACCTTCCCATCCACTGGTCCATCCCCTACACCCGCGGC
AGTGAGACCCAATCCCTCGCGGTCTCCTCGGACGGTGGCAGCAACTTCAC
CAAGCTCGACCAGGGCCCCGTCATCCCTGGCCCTCCCTTCGCCTACAACG
TCACCGCATTCCGGGACCCATACGTCTTCCAAAACCCCACCCTCGACTCC
CTCCTACACAGCAAGAACAACACCTGGTATACCGTCATCTCCGGTGGTCT
GCACGGCAAGGGCCCCGCCCAGTTCCTCTACCGCCAGTACGACCCGGACT
TCCAGTACTGGGAGTTCCTCGGCCAATGGTGGCACGAACCCACCAACTCC
ACCTGGGGTAACGGCACCTGGGCCGGCCGATGGGCCTTCAACTTCGAGAC
CGGCAACGTCTTCAGTCTCGACGAGTACGGATACAACCCCCACGGCCAGA
TCTTCTCCACGATCGGCACCGAGGGCTCTGACCAGCCCGTCGTGCCCCAG
CTCACCAGCATCCACGACATGCTCTGGGTGTCCGGCAACGTCTCTCGCAA
TGGCTCTGTCTCGTTCACCCCGAACATGGCGGGCTTCCTCGACTGGGGCT
TCTCCTCTTACGCAGCTGCCGGAAAGGTCCTCCCCTCGACTTCTCTGCCC
TCGACGAAGAGCGGCGCCCCGGACCGCTTCATCTCGTACGTCTGGCTGTC
CGGTGACCTGTTCGAACAGGCCGAAGGGTTCCCCACGAACCAGCAGAATT
GGACCGGTACGCTGTTGCTTCCGCGAGAGTTGCGCGTGCTGTATATCCCC
AACGTGGTGGACAATGCTCTGGCTCGGGAATCTGGTGCCTCGTGGCAGGT
CGTGAGCAGCGATAGCAGTGCGGGCACCGTCGAGCTGCAGACCCTGGGTA
TCTCCATTGCCCGGGAAACCAAGGCCGCCCTGCTGTCGGGAACGTCGTTC
ACCGAGTCCGACCGTACTCTGAACAGCAGTGGTGTCGTGCCGTTCAAGCG
CTCCCCGTCCGAGAAGTTCTTTGTTTTGTCCGCGCAGCTGTCCTTCCCTG
CTTCGGCTAGGGGATCGGGACTCAAGAGTGGATTCCAGATTCTCTCGTCG
GAGCTGGAGAGTACTACCGTGTACTACCAGTTCTCGAATGAGTCGATTAT
CGTCGACCGCAGTAACACCAGTGCTGCGGCGCGCACGACGGATGGTATCG
ATAGCAGCGCGGAGGCTGGCAAGTTGCGCCTGTTTGACGTGTTGAATGGC
GGAGAGCAGGCGATTGAGACGTTGGATTTGACTCTCGTGGTGGATAACTC
GGTCTTGGAGATCTATGCCAATGGTCGCTTTGCGTTGAGTACTTGGGTTC
GGTGAGTATCTTCCAATTTTATCAATGAAGTGTTTATGATGCTAACGTGG
GGATAGTTCTTGGTACGCCAATTCCACGAACATCAGTTTCTTCCAGAATG
GCGTGGGTGGTGTTGCGTTCTCCAACGTGACTGTTTCCGAGGGCTTGTAT
GATGCTTGGCCGGATCGTCAGTCTTGAGGTGATGCCTAGTAGCAAGGATT
ACTCCAGGTCAGGTCATACTGATCCGACAGTTAATGTCAGATGCATCGCG
TTCAAGAAGAACGGCAGACATTAATCATGAGGTGCAGCAAAGAAGGGGCT
CCCCGTTCTTCGCAGCCCCTACCATGAACGCCGATGAGGCCGGGTCTATT
GACAATATTATTTTCCTTCTTAACAACTGTTTTATTATATCACAAGAATC
AAAGAAATCCAAGCCAGACTGCAATTCCGTCAACAATAACGCCATCGCTA
TGTAAATTGCCCCAGTTGTTTTCCCTTCCCGATACTTTACTGAACTGATA
CACGATGAAGACTTGTACTCGACGTTCGCGGTGAAATATGACTCGGTCGG
AGAGGAGCTACTCCCAGCTCGTCAATCTGCGGAACAGGCTTCCTTTGCCC
GACAAGTTGCGCGGACCCGTTCCCTGACTCTGAGGGTGCGGAATATGAAT
GTGCACGTGGTGCCTGTGGACCGGGGTACGCTACGATACTCCCCCTCGCT
GGCTGATCAGACACTGTCGAGTATGTGCTTAGTGGTTGATACTGAGCCGG
CGGGGTCAATGTCGTAGCAGGTGAAGTTTCGGGATCCAGGTTCAGCGAGA
CCTGCGCCCACGGAGGTGGTGCAAACTGACCGCTCGGGGCTCTCGAGGTA
GAGGTAGAAGAAGAGGAAGAGGGACTGCTTGCAGGAGGAGTGATGCTCGG
TGGCATGGCAGGGCGTAGAGTGAAAGGGACGCTTTTTCGGAAGACATTCG
TGGTGGGTTGGACGCAAAGCACTTCATCCAGCTCCTCGTCCGTCCAGGTA
CGTCTAATGCGGACTTCGGGTGACGGTTCTGACGAGTAGAGATGGCCTAA
GATAGAGGTGCGACACCATGTCTCTGCGTCTTCGGGGGTCGCGAAACCAA
TGACCAGGCCACTGCTGCTGTCGCGGAGATAGGTCATGGTGGGAGAGTGA
GGGAGGTAGACGGCGGTGGGCTCGGCGGCGAAGATGCGGCCCTCGCGGTT
TGATGCTTGGTATGCATTTGCATGGGTTGCCGAGTTGAAGACAAGCTTCA
GCTCCTGTTTCTGGAAGATGAAGTATACATCGAACGCAGGGACGTCGTGG
TCGGACATTTCTCGTGAAGGGACACAGACTCGTAGTGATGTGTTGTAGTG
CGTACTGTCATTTGAGAGAGAACCGGGTGTT back to topCoding sequence (CDS) from alignment at ch8:4762778..4766508+ >KJC3_012852-T1 ID=KJC3_012852-T1|Name=KJC3_012852-T1|organism=Aspergillus niger KJC3|type=CDS|length=3774bp|location=Sequence derived from alignment at ch8:4762778..4766508+ (Aspergillus niger KJC3)
ATGAAGCTTCAAACGGCTTCCGTACTGCTCGGCAGTGCTGCTGCTGCCTC
GCCTTCCATGCAGACGCGGGCCTCCGTTGTCATCGACTACAATGTCGCAC
CTCCAAACCTATCCACTCTGCCCAATGGCTCCCTCTTCGAAACATGGCGT
CCCCGCGCCCACGTCCTGCCCCCCAACGGCCAGATCGGTGACCCCTGCCT
GCATTACACCGATCCCTCCACGGGCCTCTTCCACGTCGGCTTCCTTCACG
ATGGCAGCGGCATCTCCAGCGCCACCACTGATGATCTAGCCACCTACAAG
GACCTCAACCAAGGCAACCAAGTCATTGTTCCCGGGGGTATCAACGACCC
CGTCGCCGTCTTCGATGGCTCCGTCATCCCCAGCGGCATCAACGGCCTCC
CCACTCTCCTCTACACCTCCGTCTCCTACCTTCCCATCCACTGGTCCATC
CCCTACACCCGCGGCAGTGAGACCCAATCCCTCGCGGTCTCCTCGGACGG
TGGCAGCAACTTCACCAAGCTCGACCAGGGCCCCGTCATCCCTGGCCCTC
CCTTCGCCTACAACGTCACCGCATTCCGGGACCCATACGTCTTCCAAAAC
CCCACCCTCGACTCCCTCCTACACAGCAAGAACAACACCTGGTATACCGT
CATCTCCGGTGGTCTGCACGGCAAGGGCCCCGCCCAGTTCCTCTACCGCC
AGTACGACCCGGACTTCCAGTACTGGGAGTTCCTCGGCCAATGGTGGCAC
GAACCCACCAACTCCACCTGGGGTAACGGCACCTGGGCCGGCCGATGGGC
CTTCAACTTCGAGACCGGCAACGTCTTCAGTCTCGACGAGTACGGATACA
ACCCCCACGGCCAGATCTTCTCCACGATCGGCACCGAGGGCTCTGACCAG
CCCGTCGTGCCCCAGCTCACCAGCATCCACGACATGCTCTGGGTGTCCGG
CAACGTCTCTCGCAATGGCTCTGTCTCGTTCACCCCGAACATGGCGGGCT
TCCTCGACTGGGGCTTCTCCTCTTACGCAGCTGCCGGAAAGGTCCTCCCC
TCGACTTCTCTGCCCTCGACGAAGAGCGGCGCCCCGGACCGCTTCATCTC
GTACGTCTGGCTGTCCGGTGACCTGTTCGAACAGGCCGAAGGGTTCCCCA
CGAACCAGCAGAATTGGACCGGTACGCTGTTGCTTCCGCGAGAGTTGCGC
GTGCTGTATATCCCCAACGTGGTGGACAATGCTCTGGCTCGGGAATCTGG
TGCCTCGTGGCAGGTCGTGAGCAGCGATAGCAGTGCGGGCACCGTCGAGC
TGCAGACCCTGGGTATCTCCATTGCCCGGGAAACCAAGGCCGCCCTGCTG
TCGGGAACGTCGTTCACCGAGTCCGACCGTACTCTGAACAGCAGTGGTGT
CGTGCCGTTCAAGCGCTCCCCGTCCGAGAAGTTCTTTGTTTTGTCCGCGC
AGCTGTCCTTCCCTGCTTCGGCTAGGGGATCGGGACTCAAGAGTGGATTC
CAGATTCTCTCGTCGGAGCTGGAGAGTACTACCGTGTACTACCAGTTCTC
GAATGAGTCGATTATCGTCGACCGCAGTAACACCAGTGCTGCGGCGCGCA
CGACGGATGGTATCGATAGCAGCGCGGAGGCTGGCAAGTTGCGCCTGTTT
GACGTGTTGAATGGCGGAGAGCAGGCGATTGAGACGTTGGATTTGACTCT
CGTGGTGGATAACTCGGTCTTGGAGATCTATGCCAATGGTCGCTTTGCGT
TGAGTACTTGGGTTCGTTCTTGGTACGCCAATTCCACGAACATCAGTTTC
TTCCAGAATGGCGTGGGTGGTGTTGCGTTCTCCAACGTGACTGTTTCCGA
GGGCTTGTATGATGCTTGGCCGGATCGTCAGTCTTGAATGAAGCTTCAAA
CGGCTTCCGTACTGCTCGGCAGTGCTGCTGCTGCCTCGCCTTCCATGCAG
ACGCGGGCCTCCGTTGTCATCGACTACAATGTCGCACCTCCAAACCTATC
CACTCTGCCCAATGGCTCCCTCTTCGAAACATGGCGTCCCCGCGCCCACG
TCCTGCCCCCCAACGGCCAGATCGGTGACCCCTGCCTGCATTACACCGAT
CCCTCCACGGGCCTCTTCCACGTCGGCTTCCTTCACGATGGCAGCGGCAT
CTCCAGCGCCACCACTGATGATCTAGCCACCTACAAGGACCTCAACCAAG
GCAACCAAGTCATTGTTCCCGGGGGTATCAACGACCCCGTCGCCGTCTTC
GATGGCTCCGTCATCCCCAGCGGCATCAACGGCCTCCCCACTCTCCTCTA
CACCTCCGTCTCCTACCTTCCCATCCACTGGTCCATCCCCTACACCCGCG
GCAGTGAGACCCAATCCCTCGCGGTCTCCTCGGACGGTGGCAGCAACTTC
ACCAAGCTCGACCAGGGCCCCGTCATCCCTGGCCCTCCCTTCGCCTACAA
CGTCACCGCATTCCGGGACCCATACGTCTTCCAAAACCCCACCCTCGACT
CCCTCCTACACAGCAAGAACAACACCTGGTATACCGTCATCTCCGGTGGT
CTGCACGGCAAGGGCCCCGCCCAGTTCCTCTACCGCCAGTACGACCCGGA
CTTCCAGTACTGGGAGTTCCTCGGCCAATGGTGGCACGAACCCACCAACT
CCACCTGGGGTAACGGCACCTGGGCCGGCCGATGGGCCTTCAACTTCGAG
ACCGGCAACGTCTTCAGTCTCGACGAGTACGGATACAACCCCCACGGCCA
GATCTTCTCCACGATCGGCACCGAGGGCTCTGACCAGCCCGTCGTGCCCC
AGCTCACCAGCATCCACGACATGCTCTGGGTGTCCGGCAACGTCTCTCGC
AATGGCTCTGTCTCGTTCACCCCGAACATGGCGGGCTTCCTCGACTGGGG
CTTCTCCTCTTACGCAGCTGCCGGAAAGGTCCTCCCCTCGACTTCTCTGC
CCTCGACGAAGAGCGGCGCCCCGGACCGCTTCATCTCGTACGTCTGGCTG
TCCGGTGACCTGTTCGAACAGGCCGAAGGGTTCCCCACGAACCAGCAGAA
TTGGACCGGTACGCTGTTGCTTCCGCGAGAGTTGCGCGTGCTGTATATCC
CCAACGTGGTGGACAATGCTCTGGCTCGGGAATCTGGTGCCTCGTGGCAG
GTCGTGAGCAGCGATAGCAGTGCGGGCACCGTCGAGCTGCAGACCCTGGG
TATCTCCATTGCCCGGGAAACCAAGGCCGCCCTGCTGTCGGGAACGTCGT
TCACCGAGTCCGACCGTACTCTGAACAGCAGTGGTGTCGTGCCGTTCAAG
CGCTCCCCGTCCGAGAAGTTCTTTGTTTTGTCCGCGCAGCTGTCCTTCCC
TGCTTCGGCTAGGGGATCGGGACTCAAGAGTGGATTCCAGATTCTCTCGT
CGGAGCTGGAGAGTACTACCGTGTACTACCAGTTCTCGAATGAGTCGATT
ATCGTCGACCGCAGTAACACCAGTGCTGCGGCGCGCACGACGGATGGTAT
CGATAGCAGCGCGGAGGCTGGCAAGTTGCGCCTGTTTGACGTGTTGAATG
GCGGAGAGCAGGCGATTGAGACGTTGGATTTGACTCTCGTGGTGGATAAC
TCGGTCTTGGAGATCTATGCCAATGGTCGCTTTGCGTTGAGTACTTGGGT
TCGTTCTTGGTACGCCAATTCCACGAACATCAGTTTCTTCCAGAATGGCG
TGGGTGGTGTTGCGTTCTCCAACGTGACTGTTTCCGAGGGCTTGTATGAT
GCTTGGCCGGATCGTCAGTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012852-T1.utr5p1 | KJC3_012852-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012852-T1.utr3p1 | KJC3_012852-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH32 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR023296 |
| DBxref | InterPro:IPR013148 |
| DBxref | InterPro:IPR013189 |
| DBxref | InterPro:IPR001362 |
| DBxref | PFAM:PF00251 |
| DBxref | PFAM:PF08244 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4762778..4766508 + |
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