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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4767624..4769517+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012855-T1 ID=KJC3_012855-T1|Name=KJC3_012855-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1894bp|location=Sequence derived from alignment at ch8:4767624..4769517+ (Aspergillus niger KJC3)
CAAAAAAAGGGCGGTCAGCACTCGGTTGGCAGTTATCCCCGCTTCCTGAT
TGGTCAACAATCCCACCGCCTTGGGCTGGTGCGTTCTTCCGTGGCGTGAA
TCATCACTCAGCACCCGCACTCCGATCAGATTTTCTTCAGGAACTCATAG
GACATTGTTACCCGTCTCGATCATCTTTTTGTCTCCTACCAAGCATACCA
CAATGTCGGCCGACGCTGATACCACGGAGTCGCAATTCCAGAAGATCGGG
GATATCGTTGAGCGGAACGATGACACTGGTCTCATGCAGGTCGAAAGTCT
CTGCATGAACTGCCACGAAAATGTATGTCCGATTGTACCACTGGGATGCA
GTATGATGTCTCAAGGACCTGCCTAATGCGATGGAATCTAGGGAACTACC
CGCCTGCTACTCCTCCGTGTACCTTTCTTCCGTGATCTCATTCTCGAGTC
CTTCGAATGTCCGCACTGTTTCTTCAAGAACAATTCCATCAAGTCTGCCG
GCCAGATCCAAGAATTGGGATGCAAATATACCCTGGAAGTTGAGAATGCG
GAGGATTTACAGCGTCAAGTCGTCCGAAGTGATGTAGCCGTGTTCAAAAT
CGAATCCCTTGGTATTGAGATGCCGAAAGAGGGACAACTCACAACCGTCG
AGGGTCTCGTCCAACGGATACATGAGTCCCTGTCGAGTGAACAACCCCTC
CGCAAAGTCCAGGCGCCTGAAGTTCATGACGCCCTGGTGCCTCTGATTCA
GAAACTAGAGGATTACCTGAACGGGACCGGATTTCCCTTCACCATTTCTC
TAGATGATTATACGGGTAACTCTTGGATTGCCCCCAACACCGCAGATAAG
GGAAACAAGTACAAGCGAAGCGAGTACCCCCGGACTCAAGCACAAAACGA
AGAGCTTGGCCTGAGCTCTGATGCTCAGCCCGCTGGCATCAAGCGGGTTG
ACGGATTTGGAGATCCCGAAGATCTGGATCTTGTTGATGGTGTTTACTCC
TTGCCCGCTAATTGTCCCGGCTGTGCGAAGGACTGTGAGGTCAACATGCA
GAAAATCTCCATCCCGCATTTTAAGGAAGTATTCAGTATGGACACCTTAT
TCTCATATTCATTTCTCACGGTCGATACTGACATGGAATACTAGTTTGGG
CAACTGTCTGCCCCCACTGTGGCTATAAGTCAAACGAAGTCAAGACCGGA
GGCGCAATTCCAGAGAAGGGCACCCGTATCACATTGTCCGTTCAAAATGA
GGTGGACTTGAACCGAGACGTCCTTAAGTCTAATAGTTGCTCTATGTACA
GTGAGGAGCTGGAGCTTGAAGGTAAGCCCTTCTTCGTGATGACCTAGGTA
TATGACATGGTACTAAGATCTTCTAGTTCAATCCGGCACCCTGGGATCCC
GATTCACCACCATCGAAGGTATTCTGACTGAGATTCGTGATCAACTGACC
TCCACAATCTTCGATGTTGAGGACACCGCTCGGCAGGGTGGAGATAGTAT
GCCTGGGGAGGAAAAGAGCAAGTGGGACAGCTTCTTTGCACGCCTTGAGA
AGGCGATCAGCGGTGAACTGAAATTCACGATCACCTTGGTGGACCCGCTG
TCAAACAGTTATGTGCAGGACCTGTGCGCGCCTGCGGCTGATCCGCAGCT
CACGGTTGAAGAGTATACCCGGACTGAAGAGGAGGAGGAAGAGTTTGGAT
TAAAAGATATGAAGACTGAGGGATATGAGCAGGACGCCGAGGAGAACAAG
CAGTAGAAGGGGGGTGTTTGGGTCTGACGTCGACTAAGTTACTAAATATA
TCCAGATCAGCGGTCGAATAAATACAATTATATTAGTAGAACTCTGATAC
TCCTTTGGAATATCCGCCTTCAAGAATTTTATTATTTCTAAAGC back to topCoding sequence (CDS) from alignment at ch8:4767624..4769517+ >KJC3_012855-T1 ID=KJC3_012855-T1|Name=KJC3_012855-T1|organism=Aspergillus niger KJC3|type=CDS|length=5484bp|location=Sequence derived from alignment at ch8:4767624..4769517+ (Aspergillus niger KJC3)
ATGTCGGCCGACGCTGATACCACGGAGTCGCAATTCCAGAAGATCGGGGA
TATCGTTGAGCGGAACGATGACACTGGTCTCATGCAGGTCGAAAGTCTCT
GCATGAACTGCCACGAAAATGGAACTACCCGCCTGCTACTCCTCCGTGTA
CCTTTCTTCCGTGATCTCATTCTCGAGTCCTTCGAATGTCCGCACTGTTT
CTTCAAGAACAATTCCATCAAGTCTGCCGGCCAGATCCAAGAATTGGGAT
GCAAATATACCCTGGAAGTTGAGAATGCGGAGGATTTACAGCGTCAAGTC
GTCCGAAGTGATGTAGCCGTGTTCAAAATCGAATCCCTTGGTATTGAGAT
GCCGAAAGAGGGACAACTCACAACCGTCGAGGGTCTCGTCCAACGGATAC
ATGAGTCCCTGTCGAGTGAACAACCCCTCCGCAAAGTCCAGGCGCCTGAA
GTTCATGACGCCCTGGTGCCTCTGATTCAGAAACTAGAGGATTACCTGAA
CGGGACCGGATTTCCCTTCACCATTTCTCTAGATGATTATACGGGTAACT
CTTGGATTGCCCCCAACACCGCAGATAAGGGAAACAAGTACAAGCGAAGC
GAGTACCCCCGGACTCAAGCACAAAACGAAGAGCTTGGCCTGAGCTCTGA
TGCTCAGCCCGCTGGCATCAAGCGGGTTGACGGATTTGGAGATCCCGAAG
ATCTGGATCTTGTTGATGGTGTTTACTCCTTGCCCGCTAATTGTCCCGGC
TGTGCGAAGGACTGTGAGGTCAACATGCAGAAAATCTCCATCCCGCATTT
TAAGGAAGTATTCATTTGGGCAACTGTCTGCCCCCACTGTGGCTATAAGT
CAAACGAAGTCAAGACCGGAGGCGCAATTCCAGAGAAGGGCACCCGTATC
ACATTGTCCGTTCAAAATGAGGTGGACTTGAACCGAGACGTCCTTAAGTC
TAATAGTTGCTCTATGTACAGTGAGGAGCTGGAGCTTGAAGTTCAATCCG
GCACCCTGGGATCCCGATTCACCACCATCGAAGGTATTCTGACTGAGATT
CGTGATCAACTGACCTCCACAATCTTCGATGTTGAGGACACCGCTCGGCA
GGGTGGAGATAGTATGCCTGGGGAGGAAAAGAGCAAGTGGGACAGCTTCT
TTGCACGCCTTGAGAAGGCGATCAGCGGTGAACTGAAATTCACGATCACC
TTGGTGGACCCGCTGTCAAACAGTTATGTGCAGGACCTGTGCGCGCCTGC
GGCTGATCCGCAGCTCACGGTTGAAGAGTATACCCGGACTGAAGAGGAGG
AGGAAGAGTTTGGATTAAAAGATATGAAGACTGAGGGATATGAGCAGGAC
GCCGAGGAGAACAAGCAGTAGATGTCGGCCGACGCTGATACCACGGAGTC
GCAATTCCAGAAGATCGGGGATATCGTTGAGCGGAACGATGACACTGGTC
TCATGCAGGTCGAAAGTCTCTGCATGAACTGCCACGAAAATGGAACTACC
CGCCTGCTACTCCTCCGTGTACCTTTCTTCCGTGATCTCATTCTCGAGTC
CTTCGAATGTCCGCACTGTTTCTTCAAGAACAATTCCATCAAGTCTGCCG
GCCAGATCCAAGAATTGGGATGCAAATATACCCTGGAAGTTGAGAATGCG
GAGGATTTACAGCGTCAAGTCGTCCGAAGTGATGTAGCCGTGTTCAAAAT
CGAATCCCTTGGTATTGAGATGCCGAAAGAGGGACAACTCACAACCGTCG
AGGGTCTCGTCCAACGGATACATGAGTCCCTGTCGAGTGAACAACCCCTC
CGCAAAGTCCAGGCGCCTGAAGTTCATGACGCCCTGGTGCCTCTGATTCA
GAAACTAGAGGATTACCTGAACGGGACCGGATTTCCCTTCACCATTTCTC
TAGATGATTATACGGGTAACTCTTGGATTGCCCCCAACACCGCAGATAAG
GGAAACAAGTACAAGCGAAGCGAGTACCCCCGGACTCAAGCACAAAACGA
AGAGCTTGGCCTGAGCTCTGATGCTCAGCCCGCTGGCATCAAGCGGGTTG
ACGGATTTGGAGATCCCGAAGATCTGGATCTTGTTGATGGTGTTTACTCC
TTGCCCGCTAATTGTCCCGGCTGTGCGAAGGACTGTGAGGTCAACATGCA
GAAAATCTCCATCCCGCATTTTAAGGAAGTATTCATTTGGGCAACTGTCT
GCCCCCACTGTGGCTATAAGTCAAACGAAGTCAAGACCGGAGGCGCAATT
CCAGAGAAGGGCACCCGTATCACATTGTCCGTTCAAAATGAGGTGGACTT
GAACCGAGACGTCCTTAAGTCTAATAGTTGCTCTATGTACAGTGAGGAGC
TGGAGCTTGAAGTTCAATCCGGCACCCTGGGATCCCGATTCACCACCATC
GAAGGTATTCTGACTGAGATTCGTGATCAACTGACCTCCACAATCTTCGA
TGTTGAGGACACCGCTCGGCAGGGTGGAGATAGTATGCCTGGGGAGGAAA
AGAGCAAGTGGGACAGCTTCTTTGCACGCCTTGAGAAGGCGATCAGCGGT
GAACTGAAATTCACGATCACCTTGGTGGACCCGCTGTCAAACAGTTATGT
GCAGGACCTGTGCGCGCCTGCGGCTGATCCGCAGCTCACGGTTGAAGAGT
ATACCCGGACTGAAGAGGAGGAGGAAGAGTTTGGATTAAAAGATATGAAG
ACTGAGGGATATGAGCAGGACGCCGAGGAGAACAAGCAGTAGATGTCGGC
CGACGCTGATACCACGGAGTCGCAATTCCAGAAGATCGGGGATATCGTTG
AGCGGAACGATGACACTGGTCTCATGCAGGTCGAAAGTCTCTGCATGAAC
TGCCACGAAAATGGAACTACCCGCCTGCTACTCCTCCGTGTACCTTTCTT
CCGTGATCTCATTCTCGAGTCCTTCGAATGTCCGCACTGTTTCTTCAAGA
ACAATTCCATCAAGTCTGCCGGCCAGATCCAAGAATTGGGATGCAAATAT
ACCCTGGAAGTTGAGAATGCGGAGGATTTACAGCGTCAAGTCGTCCGAAG
TGATGTAGCCGTGTTCAAAATCGAATCCCTTGGTATTGAGATGCCGAAAG
AGGGACAACTCACAACCGTCGAGGGTCTCGTCCAACGGATACATGAGTCC
CTGTCGAGTGAACAACCCCTCCGCAAAGTCCAGGCGCCTGAAGTTCATGA
CGCCCTGGTGCCTCTGATTCAGAAACTAGAGGATTACCTGAACGGGACCG
GATTTCCCTTCACCATTTCTCTAGATGATTATACGGGTAACTCTTGGATT
GCCCCCAACACCGCAGATAAGGGAAACAAGTACAAGCGAAGCGAGTACCC
CCGGACTCAAGCACAAAACGAAGAGCTTGGCCTGAGCTCTGATGCTCAGC
CCGCTGGCATCAAGCGGGTTGACGGATTTGGAGATCCCGAAGATCTGGAT
CTTGTTGATGGTGTTTACTCCTTGCCCGCTAATTGTCCCGGCTGTGCGAA
GGACTGTGAGGTCAACATGCAGAAAATCTCCATCCCGCATTTTAAGGAAG
TATTCATTTGGGCAACTGTCTGCCCCCACTGTGGCTATAAGTCAAACGAA
GTCAAGACCGGAGGCGCAATTCCAGAGAAGGGCACCCGTATCACATTGTC
CGTTCAAAATGAGGTGGACTTGAACCGAGACGTCCTTAAGTCTAATAGTT
GCTCTATGTACAGTGAGGAGCTGGAGCTTGAAGTTCAATCCGGCACCCTG
GGATCCCGATTCACCACCATCGAAGGTATTCTGACTGAGATTCGTGATCA
ACTGACCTCCACAATCTTCGATGTTGAGGACACCGCTCGGCAGGGTGGAG
ATAGTATGCCTGGGGAGGAAAAGAGCAAGTGGGACAGCTTCTTTGCACGC
CTTGAGAAGGCGATCAGCGGTGAACTGAAATTCACGATCACCTTGGTGGA
CCCGCTGTCAAACAGTTATGTGCAGGACCTGTGCGCGCCTGCGGCTGATC
CGCAGCTCACGGTTGAAGAGTATACCCGGACTGAAGAGGAGGAGGAAGAG
TTTGGATTAAAAGATATGAAGACTGAGGGATATGAGCAGGACGCCGAGGA
GAACAAGCAGTAGATGTCGGCCGACGCTGATACCACGGAGTCGCAATTCC
AGAAGATCGGGGATATCGTTGAGCGGAACGATGACACTGGTCTCATGCAG
GTCGAAAGTCTCTGCATGAACTGCCACGAAAATGGAACTACCCGCCTGCT
ACTCCTCCGTGTACCTTTCTTCCGTGATCTCATTCTCGAGTCCTTCGAAT
GTCCGCACTGTTTCTTCAAGAACAATTCCATCAAGTCTGCCGGCCAGATC
CAAGAATTGGGATGCAAATATACCCTGGAAGTTGAGAATGCGGAGGATTT
ACAGCGTCAAGTCGTCCGAAGTGATGTAGCCGTGTTCAAAATCGAATCCC
TTGGTATTGAGATGCCGAAAGAGGGACAACTCACAACCGTCGAGGGTCTC
GTCCAACGGATACATGAGTCCCTGTCGAGTGAACAACCCCTCCGCAAAGT
CCAGGCGCCTGAAGTTCATGACGCCCTGGTGCCTCTGATTCAGAAACTAG
AGGATTACCTGAACGGGACCGGATTTCCCTTCACCATTTCTCTAGATGAT
TATACGGGTAACTCTTGGATTGCCCCCAACACCGCAGATAAGGGAAACAA
GTACAAGCGAAGCGAGTACCCCCGGACTCAAGCACAAAACGAAGAGCTTG
GCCTGAGCTCTGATGCTCAGCCCGCTGGCATCAAGCGGGTTGACGGATTT
GGAGATCCCGAAGATCTGGATCTTGTTGATGGTGTTTACTCCTTGCCCGC
TAATTGTCCCGGCTGTGCGAAGGACTGTGAGGTCAACATGCAGAAAATCT
CCATCCCGCATTTTAAGGAAGTATTCATTTGGGCAACTGTCTGCCCCCAC
TGTGGCTATAAGTCAAACGAAGTCAAGACCGGAGGCGCAATTCCAGAGAA
GGGCACCCGTATCACATTGTCCGTTCAAAATGAGGTGGACTTGAACCGAG
ACGTCCTTAAGTCTAATAGTTGCTCTATGTACAGTGAGGAGCTGGAGCTT
GAAGTTCAATCCGGCACCCTGGGATCCCGATTCACCACCATCGAAGGTAT
TCTGACTGAGATTCGTGATCAACTGACCTCCACAATCTTCGATGTTGAGG
ACACCGCTCGGCAGGGTGGAGATAGTATGCCTGGGGAGGAAAAGAGCAAG
TGGGACAGCTTCTTTGCACGCCTTGAGAAGGCGATCAGCGGTGAACTGAA
ATTCACGATCACCTTGGTGGACCCGCTGTCAAACAGTTATGTGCAGGACC
TGTGCGCGCCTGCGGCTGATCCGCAGCTCACGGTTGAAGAGTATACCCGG
ACTGAAGAGGAGGAGGAAGAGTTTGGATTAAAAGATATGAAGACTGAGGG
ATATGAGCAGGACGCCGAGGAGAACAAGCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012855-T1.utr5p1 | KJC3_012855-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012855-T1.utr3p1 | KJC3_012855-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262Z0M |
| DBxref | InterPro:IPR042452 |
| DBxref | InterPro:IPR042451 |
| DBxref | InterPro:IPR004457 |
| DBxref | PFAM:PF03367 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4767624..4769517 + |
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