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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4770035..4771843- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012856-T1 ID=KJC3_012856-T1|Name=KJC3_012856-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1809bp|location=Sequence derived from alignment at ch8:4770035..4771843- (Aspergillus niger KJC3)
CATCTCTAAGCCTCGAAGCATTTCCTCCCGTTTCCGTCAATAGTAACTCC
AGAATGCCTCGCACTTCTCTCCTCACCCTGGCCTGTGCCCTGGCCACGGG
CGCATCCGCTTTCTCCTACGGCGCTGCCATTCCCCAGTCCACCCAGGAAA
AAGCAGTTCTCTCAGGAGTTCCGCGATGGCTACAGCATCCTGAAGCACTA
CGGTGGTAACGGACCCTACTCTGAGCGGGTGTCGTATGGAATCGCCCGCG
ATCCCCCGACCGGCTGCGAGGTCGATCAAGTCATCATGATCAAGCGTCAC
GGCGAGCGCTACCCTTCCCCTTCCGCCGGCAAGAGCATTGAGGAGGCTCT
AGCCAAGGTCTACAGCATCAACACCACCGAATACAAGGGTGACCTGGCCT
TCCTTAACGACTGGACCTACTACGTCCCCAACGAGTGCTATTACAATGCC
GAGACCACCAGCGGTCCCTACGCCGGTCTGCTGGATGCTTACAACCATGG
CAACGAGTACAAGGCCCGCTACGGCCACCTTTGGGACGGCGAGACAGTCG
TGCCCTTCTTCTCCAGTGGCTACGGACGGGTCATCAACACGGCCCGCAAG
TTCGGCGAGGGTTTCTTTGGCTACAACTACTCCACCAACGCGGCCCTCAA
CATCATCTCCGAGTCCGAGGTCATGGGTGCCGACAGCCTGACTCCCACCT
GTGACACCGACAACGACCAGACCACCTGCGACAACCTGACCAACCAGCTG
CCCCAGTTCAAGATTGCTGCTGCCCGTCTCAACTCGCAAAACCCTGGCAT
GAACCTCACTGCATCCGATGTCTACAACCTGATGGGTATGTGACACTCTC
TGTGGCATCTGATAATCTTCGAGTCCAACGGAAGCTGACAATGTATCAGT
AATGGCCTCCTTTGAGCTTAATGCTCGTCCCTTCTCCAACTGGATCAACG
CCTTCACCCAAGACGAATGGGTCAGCTTCGGCTACGTTGAGGATCTAAAC
TACTACTACTGCGCAGGGTGAGATTATTCCTTCCTTCCTCAAATTAAACC
TGGATCGGCAACTAAATGATCAACACAGTCCCGGTGACAAGAACATGGCC
GCTGTGGGCGCTGTCTATGCCAATGCCAGTCTCACTCTCCTGAATCAAGG
ACCCAAGGAAGCCGGCTCCTTGTTCTTCAACTTGTACGTCTCACGCAGAC
TCACCCCTCCTGTCAAAGAAACCCTTCACTAACATACTACAGCGCCCACG
ACACCAACATCACCCCCATCCTCGCCGCCCTGGGCGTCCTCATCCCCACC
GAAGACCTGCCCCTGGACCGCGTCGCCTTCGGCAACCCCTACTCGACCGG
CAACATCGTGCCCCAGGGTGGCCACCTGACCATCGAGCGCCTCAGCTGCC
AGGCCACCGCTCTATCGGACGAGGGCACCTACGTGCGTCTGGTACTGAAC
GAGGCCGTGCTCCCCTTCAACGACTGCACCTCCGGACCAGGCTACTCCTG
CCCTCTGGCCAACTACACTGCCATCCTGAACAAGGACCTGCCCGACTACA
CGACCACCTGCAACGTGTCTGCATCCTACCCGCAGCACCTGAGCTTCTGG
TGGAATTACAACACCACTACAGAGCTGAACTACCGCTCTAGCCCGATTGC
TTGCCAGGAGGGTGCTGCTATGGACTAAATGGAGAGAGATGAGACAGAAG
TACTTGGGTGATGATTGGATATTCATGTTTGATTGGTGTAGCGATCACCG
TGTTATTAAAAGTCTTGTATAGTCATGCGGTGAATGTAAATAATAATAGT
AATGATAGC back to topCoding sequence (CDS) from alignment at ch8:4770035..4771843- >KJC3_012856-T1 ID=KJC3_012856-T1|Name=KJC3_012856-T1|organism=Aspergillus niger KJC3|type=CDS|length=4836bp|location=Sequence derived from alignment at ch8:4770035..4771843- (Aspergillus niger KJC3)
CGCCCACGACACCAACATCACCCCCATCCTCGCCGCCCTGGGCGTCCTCA
TCCCCACCGAAGACCTGCCCCTGGACCGCGTCGCCTTCGGCAACCCCTAC
TCGACCGGCAACATCGTGCCCCAGGGTGGCCACCTGACCATCGAGCGCCT
CAGCTGCCAGGCCACCGCTCTATCGGACGAGGGCACCTACGTGCGTCTGG
TACTGAACGAGGCCGTGCTCCCCTTCAACGACTGCACCTCCGGACCAGGC
TACTCCTGCCCTCTGGCCAACTACACTGCCATCCTGAACAAGGACCTGCC
CGACTACACGACCACCTGCAACGTGTCTGCATCCTACCCGCAGCACCTGA
GCTTCTGGTGGAATTACAACACCACTACAGAGCTGAACTACCGCTCTAGC
CCGATTGCTTGCCAGGAGGGTGCTGCTATGGACTAATCCCGGTGACAAGA
ACATGGCCGCTGTGGGCGCTGTCTATGCCAATGCCAGTCTCACTCTCCTG
AATCAAGGACCCAAGGAAGCCGGCTCCTTGTTCTTCAACTTTAATGGCCT
CCTTTGAGCTTAATGCTCGTCCCTTCTCCAACTGGATCAACGCCTTCACC
CAAGACGAATGGGTCAGCTTCGGCTACGTTGAGGATCTAAACTACTACTA
CTGCGCAGGATGATCAAGCGTCACGGCGAGCGCTACCCTTCCCCTTCCGC
CGGCAAGAGCATTGAGGAGGCTCTAGCCAAGGTCTACAGCATCAACACCA
CCGAATACAAGGGTGACCTGGCCTTCCTTAACGACTGGACCTACTACGTC
CCCAACGAGTGCTATTACAATGCCGAGACCACCAGCGGTCCCTACGCCGG
TCTGCTGGATGCTTACAACCATGGCAACGAGTACAAGGCCCGCTACGGCC
ACCTTTGGGACGGCGAGACAGTCGTGCCCTTCTTCTCCAGTGGCTACGGA
CGGGTCATCAACACGGCCCGCAAGTTCGGCGAGGGTTTCTTTGGCTACAA
CTACTCCACCAACGCGGCCCTCAACATCATCTCCGAGTCCGAGGTCATGG
GTGCCGACAGCCTGACTCCCACCTGTGACACCGACAACGACCAGACCACC
TGCGACAACCTGACCAACCAGCTGCCCCAGTTCAAGATTGCTGCTGCCCG
TCTCAACTCGCAAAACCCTGGCATGAACCTCACTGCATCCGATGTCTACA
ACCTGATGGCGCCCACGACACCAACATCACCCCCATCCTCGCCGCCCTGG
GCGTCCTCATCCCCACCGAAGACCTGCCCCTGGACCGCGTCGCCTTCGGC
AACCCCTACTCGACCGGCAACATCGTGCCCCAGGGTGGCCACCTGACCAT
CGAGCGCCTCAGCTGCCAGGCCACCGCTCTATCGGACGAGGGCACCTACG
TGCGTCTGGTACTGAACGAGGCCGTGCTCCCCTTCAACGACTGCACCTCC
GGACCAGGCTACTCCTGCCCTCTGGCCAACTACACTGCCATCCTGAACAA
GGACCTGCCCGACTACACGACCACCTGCAACGTGTCTGCATCCTACCCGC
AGCACCTGAGCTTCTGGTGGAATTACAACACCACTACAGAGCTGAACTAC
CGCTCTAGCCCGATTGCTTGCCAGGAGGGTGCTGCTATGGACTAATCCCG
GTGACAAGAACATGGCCGCTGTGGGCGCTGTCTATGCCAATGCCAGTCTC
ACTCTCCTGAATCAAGGACCCAAGGAAGCCGGCTCCTTGTTCTTCAACTT
TAATGGCCTCCTTTGAGCTTAATGCTCGTCCCTTCTCCAACTGGATCAAC
GCCTTCACCCAAGACGAATGGGTCAGCTTCGGCTACGTTGAGGATCTAAA
CTACTACTACTGCGCAGGATGATCAAGCGTCACGGCGAGCGCTACCCTTC
CCCTTCCGCCGGCAAGAGCATTGAGGAGGCTCTAGCCAAGGTCTACAGCA
TCAACACCACCGAATACAAGGGTGACCTGGCCTTCCTTAACGACTGGACC
TACTACGTCCCCAACGAGTGCTATTACAATGCCGAGACCACCAGCGGTCC
CTACGCCGGTCTGCTGGATGCTTACAACCATGGCAACGAGTACAAGGCCC
GCTACGGCCACCTTTGGGACGGCGAGACAGTCGTGCCCTTCTTCTCCAGT
GGCTACGGACGGGTCATCAACACGGCCCGCAAGTTCGGCGAGGGTTTCTT
TGGCTACAACTACTCCACCAACGCGGCCCTCAACATCATCTCCGAGTCCG
AGGTCATGGGTGCCGACAGCCTGACTCCCACCTGTGACACCGACAACGAC
CAGACCACCTGCGACAACCTGACCAACCAGCTGCCCCAGTTCAAGATTGC
TGCTGCCCGTCTCAACTCGCAAAACCCTGGCATGAACCTCACTGCATCCG
ATGTCTACAACCTGATGGCGCCCACGACACCAACATCACCCCCATCCTCG
CCGCCCTGGGCGTCCTCATCCCCACCGAAGACCTGCCCCTGGACCGCGTC
GCCTTCGGCAACCCCTACTCGACCGGCAACATCGTGCCCCAGGGTGGCCA
CCTGACCATCGAGCGCCTCAGCTGCCAGGCCACCGCTCTATCGGACGAGG
GCACCTACGTGCGTCTGGTACTGAACGAGGCCGTGCTCCCCTTCAACGAC
TGCACCTCCGGACCAGGCTACTCCTGCCCTCTGGCCAACTACACTGCCAT
CCTGAACAAGGACCTGCCCGACTACACGACCACCTGCAACGTGTCTGCAT
CCTACCCGCAGCACCTGAGCTTCTGGTGGAATTACAACACCACTACAGAG
CTGAACTACCGCTCTAGCCCGATTGCTTGCCAGGAGGGTGCTGCTATGGA
CTAATCCCGGTGACAAGAACATGGCCGCTGTGGGCGCTGTCTATGCCAAT
GCCAGTCTCACTCTCCTGAATCAAGGACCCAAGGAAGCCGGCTCCTTGTT
CTTCAACTTTAATGGCCTCCTTTGAGCTTAATGCTCGTCCCTTCTCCAAC
TGGATCAACGCCTTCACCCAAGACGAATGGGTCAGCTTCGGCTACGTTGA
GGATCTAAACTACTACTACTGCGCAGGATGATCAAGCGTCACGGCGAGCG
CTACCCTTCCCCTTCCGCCGGCAAGAGCATTGAGGAGGCTCTAGCCAAGG
TCTACAGCATCAACACCACCGAATACAAGGGTGACCTGGCCTTCCTTAAC
GACTGGACCTACTACGTCCCCAACGAGTGCTATTACAATGCCGAGACCAC
CAGCGGTCCCTACGCCGGTCTGCTGGATGCTTACAACCATGGCAACGAGT
ACAAGGCCCGCTACGGCCACCTTTGGGACGGCGAGACAGTCGTGCCCTTC
TTCTCCAGTGGCTACGGACGGGTCATCAACACGGCCCGCAAGTTCGGCGA
GGGTTTCTTTGGCTACAACTACTCCACCAACGCGGCCCTCAACATCATCT
CCGAGTCCGAGGTCATGGGTGCCGACAGCCTGACTCCCACCTGTGACACC
GACAACGACCAGACCACCTGCGACAACCTGACCAACCAGCTGCCCCAGTT
CAAGATTGCTGCTGCCCGTCTCAACTCGCAAAACCCTGGCATGAACCTCA
CTGCATCCGATGTCTACAACCTGATGGCGCCCACGACACCAACATCACCC
CCATCCTCGCCGCCCTGGGCGTCCTCATCCCCACCGAAGACCTGCCCCTG
GACCGCGTCGCCTTCGGCAACCCCTACTCGACCGGCAACATCGTGCCCCA
GGGTGGCCACCTGACCATCGAGCGCCTCAGCTGCCAGGCCACCGCTCTAT
CGGACGAGGGCACCTACGTGCGTCTGGTACTGAACGAGGCCGTGCTCCCC
TTCAACGACTGCACCTCCGGACCAGGCTACTCCTGCCCTCTGGCCAACTA
CACTGCCATCCTGAACAAGGACCTGCCCGACTACACGACCACCTGCAACG
TGTCTGCATCCTACCCGCAGCACCTGAGCTTCTGGTGGAATTACAACACC
ACTACAGAGCTGAACTACCGCTCTAGCCCGATTGCTTGCCAGGAGGGTGC
TGCTATGGACTAATCCCGGTGACAAGAACATGGCCGCTGTGGGCGCTGTC
TATGCCAATGCCAGTCTCACTCTCCTGAATCAAGGACCCAAGGAAGCCGG
CTCCTTGTTCTTCAACTTTAATGGCCTCCTTTGAGCTTAATGCTCGTCCC
TTCTCCAACTGGATCAACGCCTTCACCCAAGACGAATGGGTCAGCTTCGG
CTACGTTGAGGATCTAAACTACTACTACTGCGCAGGATGATCAAGCGTCA
CGGCGAGCGCTACCCTTCCCCTTCCGCCGGCAAGAGCATTGAGGAGGCTC
TAGCCAAGGTCTACAGCATCAACACCACCGAATACAAGGGTGACCTGGCC
TTCCTTAACGACTGGACCTACTACGTCCCCAACGAGTGCTATTACAATGC
CGAGACCACCAGCGGTCCCTACGCCGGTCTGCTGGATGCTTACAACCATG
GCAACGAGTACAAGGCCCGCTACGGCCACCTTTGGGACGGCGAGACAGTC
GTGCCCTTCTTCTCCAGTGGCTACGGACGGGTCATCAACACGGCCCGCAA
GTTCGGCGAGGGTTTCTTTGGCTACAACTACTCCACCAACGCGGCCCTCA
ACATCATCTCCGAGTCCGAGGTCATGGGTGCCGACAGCCTGACTCCCACC
TGTGACACCGACAACGACCAGACCACCTGCGACAACCTGACCAACCAGCT
GCCCCAGTTCAAGATTGCTGCTGCCCGTCTCAACTCGCAAAACCCTGGCA
TGAACCTCACTGCATCCGATGTCTACAACCTGATGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012856-T1.utr3p1 | KJC3_012856-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012856-T1.utr5p1 | KJC3_012856-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033379 |
| DBxref | InterPro:IPR000560 |
| DBxref | InterPro:IPR029033 |
| DBxref | PFAM:PF00328 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4770035..4771843 - |
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