You are here

Home

KJC3_012857-T1, KJC3_012857-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012857-T1
Unique NameKJC3_012857-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4773456..4774492-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012857-T1 ID=KJC3_012857-T1|Name=KJC3_012857-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1037bp|location=Sequence derived from alignment at ch8:4773456..4774492- (Aspergillus niger KJC3)
TTCACTAACAGTCATGTCACGTCATGGATCATTAACTCACAGCCATTGTC
TATATCTTGGATTTTTGGCGAACTTCCGCATCAGCGGAGACTTTTCCAGG
GTCAAAATAGCATATTCGGTCATGGCCCCCTTGATACGCAACATCTCCCG
GCAGGAGGTGCAATGGGTCAACTCCAGCAGCTCCTGCACGTACAACAAGA
TCTGTTTCTTCAGGCGAACCGGGTTCGTGGTCTACCTAGCTGACCATGCT
ACTATCATTGGACATTTCCTGATCATCTCTGCTAGCAACCGTACGCTTGC
CTTTCCCCCCTTGTTCATCTATACTGACGGCTCGACAGGCTACAATGAAC
TACAGGACCAATCTATACCGGGTTCCCTGATGCTCGGATTAACACCAGCA
ACCTACTTAGCAGCTTCGCTTTCGGGATGTGCGCTTGCATCCTTCCATTA
GGCGTCTTGAGCCTCCTCCTGATATTCGACTCTTTCTGGCCGGAGCGGAA
AGAGACCCGTTGCATTCAGTGGACATGGAAACTTGGTGCTGCTGCGGCAA
GTCTGTCCCAACTAGCAGCATGCATAGTAATTACACTTATCGTGGCGACC
CAGGGAATTCAGATACACGGCGTGTCAGCGGATGAAGAGGCAGCCATCCG
CGGCAACTGGAACTGGATCTCTTTGGCGTACGGAAAAGATGGCCGGACAG
TAGCTGGGCTAGTGTTCTATTGGATCGGATGTGTATTCATGTTCTGGAGG
TAAGTGCTTGGATGGATGGATGTGATGAGACAATATCTAACCCATGTACC
AGTACCATTGCCATGTGGCATTGCTACGCGTACCACAACATTCACTGGCC
GTTTGCCAATCATGCGAGACAAAGACGGAGCCACGGAGCCAAGACGGTGT
TAAGGTCTTCAGTTATACTCAACTCTAGTGAATTAGCTGAGCCTCGTGGG
AATTAGCCACTTCCGGCTGGTTTGGCTGAATTGTTAGCTTTGTTGCTGCA
TGGTTGAACTATTTGAGCCAAGTGATAGAACAAAGAC
back to top

Coding sequence (CDS) from alignment at ch8:4773456..4774492-

>KJC3_012857-T1 ID=KJC3_012857-T1|Name=KJC3_012857-T1|organism=Aspergillus niger KJC3|type=CDS|length=2475bp|location=Sequence derived from alignment at ch8:4773456..4774492- (Aspergillus niger KJC3)
TACCATTGCCATGTGGCATTGCTACGCGTACCACAACATTCACTGGCCGT
TTGCCAATCATGCGAGACAAAGACGGAGCCACGGAGCCAAGACGGTGTTA
AGGTCTTCAGTTATACTCAACTCTAGTGAATTAGCTGAGCCTCGTGGGAA
TTAGGACCAATCTATACCGGGTTCCCTGATGCTCGGATTAACACCAGCAA
CCTACTTAGCAGCTTCGCTTTCGGGATGTGCGCTTGCATCCTTCCATTAG
GCGTCTTGAGCCTCCTCCTGATATTCGACTCTTTCTGGCCGGAGCGGAAA
GAGACCCGTTGCATTCAGTGGACATGGAAACTTGGTGCTGCTGCGGCAAG
TCTGTCCCAACTAGCAGCATGCATAGTAATTACACTTATCGTGGCGACCC
AGGGAATTCAGATACACGGCGTGTCAGCGGATGAAGAGGCAGCCATCCGC
GGCAACTGGAACTGGATCTCTTTGGCGTACGGAAAAGATGGCCGGACAGT
AGCTGGGCTAGTGTTCTATTGGATCGGATGTGTATTCATGTTCTGGAGAT
GTCACGTCATGGATCATTAACTCACAGCCATTGTCTATATCTTGGATTTT
TGGCGAACTTCCGCATCAGCGGAGACTTTTCCAGGGTCAAAATAGCATAT
TCGGTCATGGCCCCCTTGATACGCAACATCTCCCGGCAGGAGGTGCAATG
GGTCAACTCCAGCAGCTCCTGCACGTACAACAAGATCTGTTTCTTCAGGC
GAACCGGGTTCGTGGTCTACCTAGCTGACCATGCTACTATCATTGGACAT
TTCCTGATCATCTCTGCTAGCAACCTACCATTGCCATGTGGCATTGCTAC
GCGTACCACAACATTCACTGGCCGTTTGCCAATCATGCGAGACAAAGACG
GAGCCACGGAGCCAAGACGGTGTTAAGGTCTTCAGTTATACTCAACTCTA
GTGAATTAGCTGAGCCTCGTGGGAATTAGGACCAATCTATACCGGGTTCC
CTGATGCTCGGATTAACACCAGCAACCTACTTAGCAGCTTCGCTTTCGGG
ATGTGCGCTTGCATCCTTCCATTAGGCGTCTTGAGCCTCCTCCTGATATT
CGACTCTTTCTGGCCGGAGCGGAAAGAGACCCGTTGCATTCAGTGGACAT
GGAAACTTGGTGCTGCTGCGGCAAGTCTGTCCCAACTAGCAGCATGCATA
GTAATTACACTTATCGTGGCGACCCAGGGAATTCAGATACACGGCGTGTC
AGCGGATGAAGAGGCAGCCATCCGCGGCAACTGGAACTGGATCTCTTTGG
CGTACGGAAAAGATGGCCGGACAGTAGCTGGGCTAGTGTTCTATTGGATC
GGATGTGTATTCATGTTCTGGAGATGTCACGTCATGGATCATTAACTCAC
AGCCATTGTCTATATCTTGGATTTTTGGCGAACTTCCGCATCAGCGGAGA
CTTTTCCAGGGTCAAAATAGCATATTCGGTCATGGCCCCCTTGATACGCA
ACATCTCCCGGCAGGAGGTGCAATGGGTCAACTCCAGCAGCTCCTGCACG
TACAACAAGATCTGTTTCTTCAGGCGAACCGGGTTCGTGGTCTACCTAGC
TGACCATGCTACTATCATTGGACATTTCCTGATCATCTCTGCTAGCAACC
TACCATTGCCATGTGGCATTGCTACGCGTACCACAACATTCACTGGCCGT
TTGCCAATCATGCGAGACAAAGACGGAGCCACGGAGCCAAGACGGTGTTA
AGGTCTTCAGTTATACTCAACTCTAGTGAATTAGCTGAGCCTCGTGGGAA
TTAGGACCAATCTATACCGGGTTCCCTGATGCTCGGATTAACACCAGCAA
CCTACTTAGCAGCTTCGCTTTCGGGATGTGCGCTTGCATCCTTCCATTAG
GCGTCTTGAGCCTCCTCCTGATATTCGACTCTTTCTGGCCGGAGCGGAAA
GAGACCCGTTGCATTCAGTGGACATGGAAACTTGGTGCTGCTGCGGCAAG
TCTGTCCCAACTAGCAGCATGCATAGTAATTACACTTATCGTGGCGACCC
AGGGAATTCAGATACACGGCGTGTCAGCGGATGAAGAGGCAGCCATCCGC
GGCAACTGGAACTGGATCTCTTTGGCGTACGGAAAAGATGGCCGGACAGT
AGCTGGGCTAGTGTTCTATTGGATCGGATGTGTATTCATGTTCTGGAGAT
GTCACGTCATGGATCATTAACTCACAGCCATTGTCTATATCTTGGATTTT
TGGCGAACTTCCGCATCAGCGGAGACTTTTCCAGGGTCAAAATAGCATAT
TCGGTCATGGCCCCCTTGATACGCAACATCTCCCGGCAGGAGGTGCAATG
GGTCAACTCCAGCAGCTCCTGCACGTACAACAAGATCTGTTTCTTCAGGC
GAACCGGGTTCGTGGTCTACCTAGCTGACCATGCTACTATCATTGGACAT
TTCCTGATCATCTCTGCTAGCAACC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012857KJC3_012857Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012857-T1KJC3_012857-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012857-T1.cdsKJC3_012857-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012857-T1.utr3p1KJC3_012857-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012857-T1.exon3KJC3_012857-T1.exon3Aspergillus niger KJC3exon
KJC3_012857-T1.exon2KJC3_012857-T1.exon2Aspergillus niger KJC3exon
KJC3_012857-T1.exon1KJC3_012857-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012857-T1.utr5p1KJC3_012857-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4773456..4774492 -
Powered by Drupal