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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4799402..4801863+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012866-T1 ID=KJC3_012866-T1|Name=KJC3_012866-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2462bp|location=Sequence derived from alignment at ch8:4799402..4801863+ (Aspergillus niger KJC3)
ATGGCTACTCCCCGCGCATCAAGTGTGTCCGTCCAGAAGAATCGACCCCG
GCAGACTGGGTCGCTGAGCCCAGCGTGTGATGAGTGCCGAATCCGCAAAG
TGCGCTGCAATAAAGAGTATCCCAAGTGCTCAAGCTGTCGAGCGTCCAAT
CTGCCCTGTGAATTCTCCAACAAGGGCAAGCGCATCAACCATACCAAGAA
ATTGTAAGTGGCCCCTCTCGTTCCCCATCGCGGTCCGTGCCGCCTGGGTG
GGATGTGATCGTGGGTTCCCTGTCTAACAAGCTTTTCCTATAGAGTGAAT
GATGTGGAGCTCCTGGGCAGTCGTCTGGGCAAGATTGAAGAGGCTCTCTT
TCGCTGTTTGTCCGTGGTTGAAGCTGCCAACACCCCGCGATACGGCACTT
CATCTCAACCCGCTTCTCGACCAGATTCAGAGGGTAATGAAGACCGAGAA
GAGTCTCGCCGCGGCTCGGTCGACTCTGAGGATAGCTGGTCGGATGGCTC
GTCCGATCCGCTCGCTCGCGGTGAACGAGATCCGCAAGCAGATCCAATGC
ACTACAGCAGTCCCGTAGCATCGCTCTACTTTGAGGCACGAGCTGCGAGC
GTCCAGCTGATGTCGTCAATATCATCAACGGAGAACGGTTCCAACCCAGC
GAGTCCGCGCGGGCGCGAGGGTCTGTCCCCGTCGACGCCTCTGGGAAGGT
ATCTATCGGACGCCAGCGAGCTCTTCCAGCAGCTGGCCACGGGTCCTCCG
CCCGTCTCTGAGCCCAAGTACGATGATCTCCCACCAGCATTGCCCCCGCG
AACCTTGCTAGAAGGCTTCGTGGAAGCGTACTTCACCGACCTAAACCCTT
TCCTCCCTCTATATGATCGACAGAGCGTGCTTGATGCCATTGAGCAGCAG
TATGGGCCGCGAAGCGATGGCCCCGACCTTGCCTGGATATGCTCGTTCAA
TAGCATCCTACTCCACACCCTCGAGGCCAAGTCGAGTGCCGCACGGCCAG
GAGGACACACGGGAGATAGTACCCTGGAGCGAGGGTTGGTGGTCCATCTT
CTGCTCAATGCGCGCCGCTGTTACAATAACTTTGAGCGCCTCCTGCAACC
ACGTCTCGCCAACGTCCAGAGCTTGTTCAGTATGGTATGCTCCAATCTCC
CATCCGCTCAACTTAGACCTCATTCTCACCTATGCAGGCACTGGTAGCAC
TCCGATACTTCAGCTTCACAATGTTTGAGACGGTATTTGCGCAGGCTTGC
CAGTTGGCCCGCACCATCGGGCTGCACCAGACTGCCGCCGGAGCTCCCCA
GGAAGCAGAGCGGCGCCACCTCTTCTGGTGCCTGTTCATCATCGACGTTA
GTGTTCCCTTCCACTAGTATACAAAGTCTTTGACTGACTGAACATAAAGA
AACATGCGGCCTTGGCGGTTGGCAAGCCGTGTCTGCTCCCTTCTTATGCC
TGTGCTATCCCAATTCCCAGCTCCAAGTGCGGGTCACTCATCGAGGACCA
GTTCACGGCACGTATAATGCTGGCCACCATCCTCGAGGAGATGTATCGTC
GCCTACATTCAGCCCGCAGCACGCGGCGTGGCCGCGAGCAAATTTCCCGC
CGTGCTAGCCAGCTTGCCCGCCGCTTGGAGGACTGGGCGGTACAGCACGA
ACATGCCCTGCATCCGACGGGTACGCCAGAGGCGTCCCAGGTGCTGGCAG
CCGCGGAACTGCAGTATGCGCTGTATATCAGCCGAGTTCTCGTGCAACGG
CGCATTAATGGGCCGGAAAGCCGGTCCCTTCGATACAGTCATGCTCGCAC
AGGCCTGCAGTTGCTCCAGAAGCTGTGCAATGGTGACCACCTGGGAGGAC
GTCGCGTTGGCTATGCCATGTTCGCCAGGTAGGTCGGCTTCTCGGCAGAC
TGTCCGCCACACATACTAACTCTTTGCCAGTGTCACCCTCAACTACTCCC
TCATCCCCTTCCTGGAAGTGTACATGCAGGTGCTGCAGGATCACCCCCGG
GCGGATGCGTCGGATGTGGCGCTGCTGACATCCTTTGCGGCGCGCGCGGA
CATTCTGGCCGCACAGACAACCGCGACGTCGTATACGGCCCGAGTGCGCG
AGGTCAGTGCTCTCTGCTGTCAAGTCGTCACTCGGCTCCACCAGCCCCTC
GAAGCAGCCGAGTCCCAGGTGGATCAGCCGGCAATGCCGGACCCTTTCTG
GGATCTGAGTGCCATGACAGCCGATGCCGGGTGGGACACGACACCGGCAA
CGCCCCAATTTCCTAGTAATCTGTCAGTCCAGCCGGATCCCTCTTTCTTC
CTGGATGCGGGAGGTTCCGTTGGACCGGGCTTCTCGCTGGGCAGTCCCAT
CTTCACGGATGGTGGGCCGGTCATGTTTGACAACCTACTGGACTCATTTG
CTGGCCCGGACACTGCGTTGGGATTGATGCAGTGAATGATCTCGTTCTGT
TTTGACGCTTAC back to topCoding sequence (CDS) from alignment at ch8:4799402..4801863+ >KJC3_012866-T1 ID=KJC3_012866-T1|Name=KJC3_012866-T1|organism=Aspergillus niger KJC3|type=CDS|length=6744bp|location=Sequence derived from alignment at ch8:4799402..4801863+ (Aspergillus niger KJC3)
ATGGCTACTCCCCGCGCATCAAGTGTGTCCGTCCAGAAGAATCGACCCCG
GCAGACTGGGTCGCTGAGCCCAGCGTGTGATGAGTGCCGAATCCGCAAAG
TGCGCTGCAATAAAGAGTATCCCAAGTGCTCAAGCTGTCGAGCGTCCAAT
CTGCCCTGTGAATTCTCCAACAAGGGCAAGCGCATCAACCATACCAAGAA
ATTAGTGAATGATGTGGAGCTCCTGGGCAGTCGTCTGGGCAAGATTGAAG
AGGCTCTCTTTCGCTGTTTGTCCGTGGTTGAAGCTGCCAACACCCCGCGA
TACGGCACTTCATCTCAACCCGCTTCTCGACCAGATTCAGAGGGTAATGA
AGACCGAGAAGAGTCTCGCCGCGGCTCGGTCGACTCTGAGGATAGCTGGT
CGGATGGCTCGTCCGATCCGCTCGCTCGCGGTGAACGAGATCCGCAAGCA
GATCCAATGCACTACAGCAGTCCCGTAGCATCGCTCTACTTTGAGGCACG
AGCTGCGAGCGTCCAGCTGATGTCGTCAATATCATCAACGGAGAACGGTT
CCAACCCAGCGAGTCCGCGCGGGCGCGAGGGTCTGTCCCCGTCGACGCCT
CTGGGAAGGTATCTATCGGACGCCAGCGAGCTCTTCCAGCAGCTGGCCAC
GGGTCCTCCGCCCGTCTCTGAGCCCAAGTACGATGATCTCCCACCAGCAT
TGCCCCCGCGAACCTTGCTAGAAGGCTTCGTGGAAGCGTACTTCACCGAC
CTAAACCCTTTCCTCCCTCTATATGATCGACAGAGCGTGCTTGATGCCAT
TGAGCAGCAGTATGGGCCGCGAAGCGATGGCCCCGACCTTGCCTGGATAT
GCTCGTTCAATAGCATCCTACTCCACACCCTCGAGGCCAAGTCGAGTGCC
GCACGGCCAGGAGGACACACGGGAGATAGTACCCTGGAGCGAGGGTTGGT
GGTCCATCTTCTGCTCAATGCGCGCCGCTGTTACAATAACTTTGAGCGCC
TCCTGCAACCACGTCTCGCCAACGTCCAGAGCTTGTTCAGTATGGCACTG
GTAGCACTCCGATACTTCAGCTTCACAATGTTTGAGACGGTATTTGCGCA
GGCTTGCCAGTTGGCCCGCACCATCGGGCTGCACCAGACTGCCGCCGGAG
CTCCCCAGGAAGCAGAGCGGCGCCACCTCTTCTGGTGCCTGTTCATCATC
GACAAACATGCGGCCTTGGCGGTTGGCAAGCCGTGTCTGCTCCCTTCTTA
TGCCTGTGCTATCCCAATTCCCAGCTCCAAGTGCGGGTCACTCATCGAGG
ACCAGTTCACGGCACGTATAATGCTGGCCACCATCCTCGAGGAGATGTAT
CGTCGCCTACATTCAGCCCGCAGCACGCGGCGTGGCCGCGAGCAAATTTC
CCGCCGTGCTAGCCAGCTTGCCCGCCGCTTGGAGGACTGGGCGGTACAGC
ACGAACATGCCCTGCATCCGACGGGTACGCCAGAGGCGTCCCAGGTGCTG
GCAGCCGCGGAACTGCAGTATGCGCTGTATATCAGCCGAGTTCTCGTGCA
ACGGCGCATTAATGGGCCGGAAAGCCGGTCCCTTCGATACAGTCATGCTC
GCACAGGCCTGCAGTTGCTCCAGAAGCTGTGCAATGGTGACCACCTGGGA
GGACGTCGCGTTGGCTATGCCATGTTCGCCAGGTAGATGGCTACTCCCCG
CGCATCAAGTGTGTCCGTCCAGAAGAATCGACCCCGGCAGACTGGGTCGC
TGAGCCCAGCGTGTGATGAGTGCCGAATCCGCAAAGTGCGCTGCAATAAA
GAGTATCCCAAGTGCTCAAGCTGTCGAGCGTCCAATCTGCCCTGTGAATT
CTCCAACAAGGGCAAGCGCATCAACCATACCAAGAAATTAGTGAATGATG
TGGAGCTCCTGGGCAGTCGTCTGGGCAAGATTGAAGAGGCTCTCTTTCGC
TGTTTGTCCGTGGTTGAAGCTGCCAACACCCCGCGATACGGCACTTCATC
TCAACCCGCTTCTCGACCAGATTCAGAGGGTAATGAAGACCGAGAAGAGT
CTCGCCGCGGCTCGGTCGACTCTGAGGATAGCTGGTCGGATGGCTCGTCC
GATCCGCTCGCTCGCGGTGAACGAGATCCGCAAGCAGATCCAATGCACTA
CAGCAGTCCCGTAGCATCGCTCTACTTTGAGGCACGAGCTGCGAGCGTCC
AGCTGATGTCGTCAATATCATCAACGGAGAACGGTTCCAACCCAGCGAGT
CCGCGCGGGCGCGAGGGTCTGTCCCCGTCGACGCCTCTGGGAAGGTATCT
ATCGGACGCCAGCGAGCTCTTCCAGCAGCTGGCCACGGGTCCTCCGCCCG
TCTCTGAGCCCAAGTACGATGATCTCCCACCAGCATTGCCCCCGCGAACC
TTGCTAGAAGGCTTCGTGGAAGCGTACTTCACCGACCTAAACCCTTTCCT
CCCTCTATATGATCGACAGAGCGTGCTTGATGCCATTGAGCAGCAGTATG
GGCCGCGAAGCGATGGCCCCGACCTTGCCTGGATATGCTCGTTCAATAGC
ATCCTACTCCACACCCTCGAGGCCAAGTCGAGTGCCGCACGGCCAGGAGG
ACACACGGGAGATAGTACCCTGGAGCGAGGGTTGGTGGTCCATCTTCTGC
TCAATGCGCGCCGCTGTTACAATAACTTTGAGCGCCTCCTGCAACCACGT
CTCGCCAACGTCCAGAGCTTGTTCAGTATGGCACTGGTAGCACTCCGATA
CTTCAGCTTCACAATGTTTGAGACGGTATTTGCGCAGGCTTGCCAGTTGG
CCCGCACCATCGGGCTGCACCAGACTGCCGCCGGAGCTCCCCAGGAAGCA
GAGCGGCGCCACCTCTTCTGGTGCCTGTTCATCATCGACAAACATGCGGC
CTTGGCGGTTGGCAAGCCGTGTCTGCTCCCTTCTTATGCCTGTGCTATCC
CAATTCCCAGCTCCAAGTGCGGGTCACTCATCGAGGACCAGTTCACGGCA
CGTATAATGCTGGCCACCATCCTCGAGGAGATGTATCGTCGCCTACATTC
AGCCCGCAGCACGCGGCGTGGCCGCGAGCAAATTTCCCGCCGTGCTAGCC
AGCTTGCCCGCCGCTTGGAGGACTGGGCGGTACAGCACGAACATGCCCTG
CATCCGACGGGTACGCCAGAGGCGTCCCAGGTGCTGGCAGCCGCGGAACT
GCAGTATGCGCTGTATATCAGCCGAGTTCTCGTGCAACGGCGCATTAATG
GGCCGGAAAGCCGGTCCCTTCGATACAGTCATGCTCGCACAGGCCTGCAG
TTGCTCCAGAAGCTGTGCAATGGTGACCACCTGGGAGGACGTCGCGTTGG
CTATGCCATGTTCGCCAGGTAGATGGCTACTCCCCGCGCATCAAGTGTGT
CCGTCCAGAAGAATCGACCCCGGCAGACTGGGTCGCTGAGCCCAGCGTGT
GATGAGTGCCGAATCCGCAAAGTGCGCTGCAATAAAGAGTATCCCAAGTG
CTCAAGCTGTCGAGCGTCCAATCTGCCCTGTGAATTCTCCAACAAGGGCA
AGCGCATCAACCATACCAAGAAATTAGTGAATGATGTGGAGCTCCTGGGC
AGTCGTCTGGGCAAGATTGAAGAGGCTCTCTTTCGCTGTTTGTCCGTGGT
TGAAGCTGCCAACACCCCGCGATACGGCACTTCATCTCAACCCGCTTCTC
GACCAGATTCAGAGGGTAATGAAGACCGAGAAGAGTCTCGCCGCGGCTCG
GTCGACTCTGAGGATAGCTGGTCGGATGGCTCGTCCGATCCGCTCGCTCG
CGGTGAACGAGATCCGCAAGCAGATCCAATGCACTACAGCAGTCCCGTAG
CATCGCTCTACTTTGAGGCACGAGCTGCGAGCGTCCAGCTGATGTCGTCA
ATATCATCAACGGAGAACGGTTCCAACCCAGCGAGTCCGCGCGGGCGCGA
GGGTCTGTCCCCGTCGACGCCTCTGGGAAGGTATCTATCGGACGCCAGCG
AGCTCTTCCAGCAGCTGGCCACGGGTCCTCCGCCCGTCTCTGAGCCCAAG
TACGATGATCTCCCACCAGCATTGCCCCCGCGAACCTTGCTAGAAGGCTT
CGTGGAAGCGTACTTCACCGACCTAAACCCTTTCCTCCCTCTATATGATC
GACAGAGCGTGCTTGATGCCATTGAGCAGCAGTATGGGCCGCGAAGCGAT
GGCCCCGACCTTGCCTGGATATGCTCGTTCAATAGCATCCTACTCCACAC
CCTCGAGGCCAAGTCGAGTGCCGCACGGCCAGGAGGACACACGGGAGATA
GTACCCTGGAGCGAGGGTTGGTGGTCCATCTTCTGCTCAATGCGCGCCGC
TGTTACAATAACTTTGAGCGCCTCCTGCAACCACGTCTCGCCAACGTCCA
GAGCTTGTTCAGTATGGCACTGGTAGCACTCCGATACTTCAGCTTCACAA
TGTTTGAGACGGTATTTGCGCAGGCTTGCCAGTTGGCCCGCACCATCGGG
CTGCACCAGACTGCCGCCGGAGCTCCCCAGGAAGCAGAGCGGCGCCACCT
CTTCTGGTGCCTGTTCATCATCGACAAACATGCGGCCTTGGCGGTTGGCA
AGCCGTGTCTGCTCCCTTCTTATGCCTGTGCTATCCCAATTCCCAGCTCC
AAGTGCGGGTCACTCATCGAGGACCAGTTCACGGCACGTATAATGCTGGC
CACCATCCTCGAGGAGATGTATCGTCGCCTACATTCAGCCCGCAGCACGC
GGCGTGGCCGCGAGCAAATTTCCCGCCGTGCTAGCCAGCTTGCCCGCCGC
TTGGAGGACTGGGCGGTACAGCACGAACATGCCCTGCATCCGACGGGTAC
GCCAGAGGCGTCCCAGGTGCTGGCAGCCGCGGAACTGCAGTATGCGCTGT
ATATCAGCCGAGTTCTCGTGCAACGGCGCATTAATGGGCCGGAAAGCCGG
TCCCTTCGATACAGTCATGCTCGCACAGGCCTGCAGTTGCTCCAGAAGCT
GTGCAATGGTGACCACCTGGGAGGACGTCGCGTTGGCTATGCCATGTTCG
CCAGGTAGATGGCTACTCCCCGCGCATCAAGTGTGTCCGTCCAGAAGAAT
CGACCCCGGCAGACTGGGTCGCTGAGCCCAGCGTGTGATGAGTGCCGAAT
CCGCAAAGTGCGCTGCAATAAAGAGTATCCCAAGTGCTCAAGCTGTCGAG
CGTCCAATCTGCCCTGTGAATTCTCCAACAAGGGCAAGCGCATCAACCAT
ACCAAGAAATTAGTGAATGATGTGGAGCTCCTGGGCAGTCGTCTGGGCAA
GATTGAAGAGGCTCTCTTTCGCTGTTTGTCCGTGGTTGAAGCTGCCAACA
CCCCGCGATACGGCACTTCATCTCAACCCGCTTCTCGACCAGATTCAGAG
GGTAATGAAGACCGAGAAGAGTCTCGCCGCGGCTCGGTCGACTCTGAGGA
TAGCTGGTCGGATGGCTCGTCCGATCCGCTCGCTCGCGGTGAACGAGATC
CGCAAGCAGATCCAATGCACTACAGCAGTCCCGTAGCATCGCTCTACTTT
GAGGCACGAGCTGCGAGCGTCCAGCTGATGTCGTCAATATCATCAACGGA
GAACGGTTCCAACCCAGCGAGTCCGCGCGGGCGCGAGGGTCTGTCCCCGT
CGACGCCTCTGGGAAGGTATCTATCGGACGCCAGCGAGCTCTTCCAGCAG
CTGGCCACGGGTCCTCCGCCCGTCTCTGAGCCCAAGTACGATGATCTCCC
ACCAGCATTGCCCCCGCGAACCTTGCTAGAAGGCTTCGTGGAAGCGTACT
TCACCGACCTAAACCCTTTCCTCCCTCTATATGATCGACAGAGCGTGCTT
GATGCCATTGAGCAGCAGTATGGGCCGCGAAGCGATGGCCCCGACCTTGC
CTGGATATGCTCGTTCAATAGCATCCTACTCCACACCCTCGAGGCCAAGT
CGAGTGCCGCACGGCCAGGAGGACACACGGGAGATAGTACCCTGGAGCGA
GGGTTGGTGGTCCATCTTCTGCTCAATGCGCGCCGCTGTTACAATAACTT
TGAGCGCCTCCTGCAACCACGTCTCGCCAACGTCCAGAGCTTGTTCAGTA
TGGCACTGGTAGCACTCCGATACTTCAGCTTCACAATGTTTGAGACGGTA
TTTGCGCAGGCTTGCCAGTTGGCCCGCACCATCGGGCTGCACCAGACTGC
CGCCGGAGCTCCCCAGGAAGCAGAGCGGCGCCACCTCTTCTGGTGCCTGT
TCATCATCGACAAACATGCGGCCTTGGCGGTTGGCAAGCCGTGTCTGCTC
CCTTCTTATGCCTGTGCTATCCCAATTCCCAGCTCCAAGTGCGGGTCACT
CATCGAGGACCAGTTCACGGCACGTATAATGCTGGCCACCATCCTCGAGG
AGATGTATCGTCGCCTACATTCAGCCCGCAGCACGCGGCGTGGCCGCGAG
CAAATTTCCCGCCGTGCTAGCCAGCTTGCCCGCCGCTTGGAGGACTGGGC
GGTACAGCACGAACATGCCCTGCATCCGACGGGTACGCCAGAGGCGTCCC
AGGTGCTGGCAGCCGCGGAACTGCAGTATGCGCTGTATATCAGCCGAGTT
CTCGTGCAACGGCGCATTAATGGGCCGGAAAGCCGGTCCCTTCGATACAG
TCATGCTCGCACAGGCCTGCAGTTGCTCCAGAAGCTGTGCAATGGTGACC
ACCTGGGAGGACGTCGCGTTGGCTATGCCATGTTCGCCAGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012866-T1.utr3p1 | KJC3_012866-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4799402..4801863 + |
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