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KJC3_012867-T1, KJC3_012867-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012867-T1
Unique NameKJC3_012867-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4801994..4803608-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012867-T1 ID=KJC3_012867-T1|Name=KJC3_012867-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1615bp|location=Sequence derived from alignment at ch8:4801994..4803608- (Aspergillus niger KJC3)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGGTGAGCTACAGACCACTTTAGCGACTGTCAAGTCACATACAC
TAACAATATTAATTTAGATAACCTTGGTGCCATTCTGGCCGTCGCAGATG
TCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACA
ATGCAGCAGGTTCTGGAGGCCTTGATCAAGGCGTATGAGATTCAGGGCTG
CTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTAGACCACACCATCC
TGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCT
CGCGAGCAAGCCCTTAGTGCTGTATCCCACGCCTGGATGGACGGTCACCC
ACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGATGGG
CAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAG
GCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTT
CTACGATGTACTATTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTG
GCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAACACGGCCGAGGGC
CATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCG
GGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGA
CCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGAGCAACTTTGCAT
AACGCCGCAGATCGTGACCACTGTCTGCGGTACATGGTCGCTGTAGTGCT
GCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGCCCCT
GGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCA
GAGGACCCCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGT
GGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAG
TGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAG
GAAGTTTACGCAAAAGCAGAGCGGAATCTGGGTCTTCGATTGTCGACAGA
TAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGC
TACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAACCGAGGAATGGA
GGGAGATTATTCTATATTGGAGACTTCTGATGAATATGTGGTTTATGTTT
ATGTCTAAGCGATCT
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Coding sequence (CDS) from alignment at ch8:4801994..4803608-

>KJC3_012867-T1 ID=KJC3_012867-T1|Name=KJC3_012867-T1|organism=Aspergillus niger KJC3|type=CDS|length=2958bp|location=Sequence derived from alignment at ch8:4801994..4803608- (Aspergillus niger KJC3)
ATAACCTTGGTGCCATTCTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCC
CTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGA
GGCCTTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATG
CCTTCAACAAAGTCGGGTTAGACCACACCATCCTGGTCAAGATTGGCGCG
ACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCTCGCGAGCAAGCCCTTAG
TGCTGTATCCCACGCCTGGATGGACGGTCACCCACTGCGCGTGTACCGCC
AGGCACCCAACACCGGTCCGCGCAAGGGATGGGCAGCGGGTGATGCTTGC
ATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGC
CAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGATGTACTATTCA
AGGGCCAGGAATTCGATCTCCCCCAGCCATTTGGCACCTGGGTCATTGAA
ACCGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATGACGGCAGT
GGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACC
CAGCCAAGGATATCCAGTCAATCCACGCCAAGACCCAGGCTGCTGGTATG
ACGATCATCAACAAGGGCGGAGCAACTTTGCATAACGCCGCAGATCGTGA
CCACTGTCTGCGGTACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGG
TCGAGACGGCCGACTACCAGGACGACAGCCCCTGGGCGACGGACCCGCGC
GTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAGGACCCCAAATACAC
AGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTG
TCACCCTGACGGACGGCACGACGCTGCCTGAAGTGTTGGTAGAATATCCA
CTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAAGTTTACGCAAAAGC
AGAGCGGAATCTGGGTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCC
TGAAGACGGTGGCATCGGAGGAGTTTATGTCGCTACCAGCATGCCATTTT
GTGAACCTGTTCAGTTTGTAAATGACTGTCATTCCTGCCGCCGACGACAA
CTCGCGCAAGCCCTACGATGCTGTGATCCAGGCCATCGTCGACTATGTCT
ACGACTACCAGATCGCCACCGATAATGCCTGGGCGCGGGCCAAGGTCGCC
TTGATGGATGCTCTTGGAGCTGCCCTCGAGAGTATCCATACCAGTCCCCA
ATGCGCACAGCTCGTTGGACCGGCGTTCCCCATCGCCCCAGCCACCTCGG
GTTTGTTCCGGTTACCGGGAACAGCCTACCAGCTGGATATCCTCAAGGGA
GCCTTTGATCTGGGGGCCATGATCCGCTACCTCGACCACAATGATGCCTT
TCCCGGTGCAGAATGGGGGCATCCCTCGGATAACCTTGGTGCCATTCTGG
CCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGAC
AGCATCGTGACAATGCAGCAGGTTCTGGAGGCCTTGATCAAGGCGTATGA
GATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTAG
ACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTG
CTAGATCTTCCTCGCGAGCAAGCCCTTAGTGCTGTATCCCACGCCTGGAT
GGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGC
GCAAGGGATGGGCAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCA
CTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCC
CCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGAATTCGATCTCC
CCCAGCCATTTGGCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAAC
ACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGC
CAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAA
TCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGA
GCAACTTTGCATAACGCCGCAGATCGTGACCACTGTCTGCGGTACATGGT
CGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGG
ACGACAGCCCCTGGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAG
ATCACCATGGCAGAGGACCCCAAATACACAGCCGATTATCATGATATGGC
GGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGA
CGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCG
GAGACGCCGCAGGAAGTTTACGCAAAAGCAGAGCGGAATCTGGGTCTTCG
ATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGG
AGTTTATGTCGCTACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAA
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:00475472-methylcitrate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012867KJC3_012867Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012867-T1KJC3_012867-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012867-T1.cdsKJC3_012867-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012867-T1.utr3p1KJC3_012867-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012867-T1.exon2KJC3_012867-T1.exon2Aspergillus niger KJC3exon
KJC3_012867-T1.exon1KJC3_012867-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_8.11
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR012705
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4801994..4803608 -
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