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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4813194..4816091+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012870-T1 ID=KJC3_012870-T1|Name=KJC3_012870-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2898bp|location=Sequence derived from alignment at ch8:4813194..4816091+ (Aspergillus niger KJC3)
GCTTCTCAACTCCTCCCTCTTCGTTTGCTTTTTTTCGCTGCTACTCACTG
CTTCTCGGGGACCAACTGGAGGTCCATGCTGTTTTCCCTTTCGATAAGGA
TGTGAAAATTTTTCTTGTTGGTCAGACCATGACGCCGACACCAATCTGGA
GGGGTGGACATCTTTGCGCATGAGCCAGCGATCTCAAATTGCTATTAAAG
ACTCCATCTGGTTCCTCTTCTGCTCCCTCTTTCTCTCTTCCCTTTCTTCC
TTTTCAACTTATCCGCGTCGATCGCGTTGTGAAATATTTTTATATTGTGA
CCGCATTGCTGGTCCTGTATCACTACTCTTATTACCTTTTTCTTTCAATT
GTTCTGTTGTGAATCATCCCAATGTTCAAGCAGTACTCCCACATCCTGTC
CCACAAGAGGCGTCGCAGCAGGGGAAGCACCATCAACCAAGTCCTGTCGG
GCGCTCAGTCGGAGCCTGCATCCGAAGCAGCCACTGTCAGCGAGCCCGTC
GAAGTATGGACGCACTCGCAGGTGCTGCCCGAGGATGATGAGCATCGCAA
GGACTGCTTCACCACCCTGACCCCGCGCATTCACAAGTACGACCATGTCG
CCCAGCGCGGCAGCGATCGCTTCGTCCAGGACCTGACGGCAGCGCTGAAC
CTGGATGAGCCCCAGACCAGCTACCTTTCCTCCCCCGTCGGCAACTATGC
CAGCTTCCTCTACCCAGAGTGTCTGCCCGAACGTCTTGAGACTGTCGCTT
ATTTGACGGAACTGGGCAATCTGCATGATGGTATGTGAAACCCCATTAAT
TACCATCACCATCTCCTGGCATGGCTCGGACCCACCACTGACGTCTTAGG
CAAACAACAAGGCAAGAAAACCGATGAATCCGCCGAATCCCCCCGTGTCG
CTGCCCGGAAGCAACTGCTGGAAAAGGCCATGTCGGAGCTGTCGGACAAG
GACAAGGATGGCCACGAGATCATCGACTGCTACCGCAGTAACTGGCTGGT
CACCCCGGAGGTCCCCACGGCCGAGAACTGCGCCAACCTCGACGACTATG
TCGCCCGGAGACGCCTCAATGCGGGCATTGAGTAAGTCACCTTCACCTCC
CCCCCTTGCATAGCCATACATATACAATGGATTGCTAACGTGGATACCAG
CGTCTACTGGACCCTCATGGGCTTCGCGCACGGCACTCGTCTCGGAAAAG
AGGACCAGGCGGTGGTGCGCGACGCACTGGATGCCGCCGAGCGCACCATG
TTCTTCACCAACGACTACTACAGCTGGCCCAAGGAGAAGCGCGTCTCCAA
GAAGAAGCCCGTCGCCAACGTGATTCTCTTCCTCATGGAACACCAGAACA
TGTCCGAGGAGGATGCCGTCGCCAAGGCGAAGCAGCTGATCATCGACAAC
GAGCACGAGTTTGTCCGCCGTCGCGAGGCGCTCTACCAGGCCAACTCGGA
CCTGGCACCACAGCTCCGCAAATGGATGGAGGTGCTGGGCGCCTCCCTGG
CTGGTATTCACTACTGGTGTAAGAATGCTCCGCGCTATGCGGTCCCCGAA
ACCGCAGAGGAGAGTGAAGAGGAGGAGTCGTCCGAGGAAGATGGCTCTGA
TGAGGAAGAATCTTCCTCTGACGAAGACACCGACGACGACGACGAGGAAG
AGGAAGAGGAAGAGGAAGAAAAGGCTGCACCCGTTGAGGTGGTGCCGGAA
CCCGAGGAGAGTGAGGAACCCGTGGAGGTGGCTGTCTGGACTCCCCTGGT
CACCGAGGAGGAAACCCCCGACGTGCATCTGGATACCTCCGCCCTGCTGG
CCCCCAGCAGCTACGCCCGCTCGATTTCCCGCAGCACCCTGCACAGTGAT
CTGCTCACATCTCTGAATGCCTGGCTGCAGGTCCCCGCCCGCCCGCTGGC
CTTCATTCGCCAGGTTATCACCGAGCTGCAGGACTCGACCGGCATGCTGG
CCGACGTGCAGGACCAAGCCGCGCTGCGCGACCAGCGCACCCCGGCCCAC
CTGGTGTACGGACCCGCACAGTGCATGAACAGTGCGGCGTACCTGTTTGT
GCGCGCCGCCCGCATTGTCACCAGCCTCAACTGCCCCGGCATGCTGGACG
GGCTGCTGCAGGAACTGGAGGCGCACTTTGTCGGCCAGTCGTGGGAGCTG
AACTGGCGCTTCTCGACCCACTGCCCCGGCGAGACCGAGTATCTGGCCAT
GGTGGACCAGAAGGCCGGCGCCAGCTTCCGTCTGCTGACGCGCCTCATGC
AGGCGGCCAGCATGGGCGGCGCGACCCTGGACTTGGAGCCTTTCACCAAG
GTGCTGGGTCGCTTGTCGCAGATCCGCCACGAGTACCTGGGTCTGCTGGA
GTCCGCGGCCAGCGACCGCTCGTTCGGCGAGGACCTGGATCAGGCCAAGG
TGACGTACCCCATCGTGCGGGCCTGCAACCTGGACCCTGCTGGCCGGGCG
GTCATCTTTGGCATCTTCCGCCAGAAGCCGGCGGGCACGGTCCTCCCCAT
CGAGAGTAAGCGCCAGATCGTGTCGCTGGTGCAACAGACCGGGGCGCTGC
AGGCCACCTACGACCTGATCCGGCAGCTGGGCCGCGAGGCCATGAACACG
CTGAGCGAGCTGGAGACGGCGGCGGAGGAGCTGAACCCGTCGTTGCGCGC
GGTGGTGAAGTCTCTGGTTGAGGTGCCGGCCCCGGATCACCTGTAAAAAA
ATTTGATACCTTTGACGGAGACGATGCATGGTGGTTGATACGATGATGAT
GACGATGATGAGGATGACACTCCTTGTTTCTCTAATGTCTACATGTCTAT
TTTCCTTTGGCGTTTTTCTGTGATGATGATTTACGAGACTTTCCTTGATG
TACGGCTATGAGATGATATGATTAATGACGATTATATTCAAGTATTCG back to topCoding sequence (CDS) from alignment at ch8:4813194..4816091+ >KJC3_012870-T1 ID=KJC3_012870-T1|Name=KJC3_012870-T1|organism=Aspergillus niger KJC3|type=CDS|length=6561bp|location=Sequence derived from alignment at ch8:4813194..4816091+ (Aspergillus niger KJC3)
ATGTTCAAGCAGTACTCCCACATCCTGTCCCACAAGAGGCGTCGCAGCAG
GGGAAGCACCATCAACCAAGTCCTGTCGGGCGCTCAGTCGGAGCCTGCAT
CCGAAGCAGCCACTGTCAGCGAGCCCGTCGAAGTATGGACGCACTCGCAG
GTGCTGCCCGAGGATGATGAGCATCGCAAGGACTGCTTCACCACCCTGAC
CCCGCGCATTCACAAGTACGACCATGTCGCCCAGCGCGGCAGCGATCGCT
TCGTCCAGGACCTGACGGCAGCGCTGAACCTGGATGAGCCCCAGACCAGC
TACCTTTCCTCCCCCGTCGGCAACTATGCCAGCTTCCTCTACCCAGAGTG
TCTGCCCGAACGTCTTGAGACTGTCGCTTATTTGACGGAACTGGGCAATC
TGCATGATGGCAAACAACAAGGCAAGAAAACCGATGAATCCGCCGAATCC
CCCCGTGTCGCTGCCCGGAAGCAACTGCTGGAAAAGGCCATGTCGGAGCT
GTCGGACAAGGACAAGGATGGCCACGAGATCATCGACTGCTACCGCAGTA
ACTGGCTGGTCACCCCGGAGGTCCCCACGGCCGAGAACTGCGCCAACCTC
GACGACTATGTCGCCCGGAGACGCCTCAATGCGGGCATTGACGTCTACTG
GACCCTCATGGGCTTCGCGCACGGCACTCGTCTCGGAAAAGAGGACCAGG
CGGTGGTGCGCGACGCACTGGATGCCGCCGAGCGCACCATGTTCTTCACC
AACGACTACTACAGCTGGCCCAAGGAGAAGCGCGTCTCCAAGAAGAAGCC
CGTCGCCAACGTGATTCTCTTCCTCATGGAACACCAGAACATGTCCGAGG
AGGATGCCGTCGCCAAGGCGAAGCAGCTGATCATCGACAACGAGCACGAG
TTTGTCCGCCGTCGCGAGGCGCTCTACCAGGCCAACTCGGACCTGGCACC
ACAGCTCCGCAAATGGATGGAGGTGCTGGGCGCCTCCCTGGCTGGTATTC
ACTACTGGTGTAAGAATGCTCCGCGCTATGCGGTCCCCGAAACCGCAGAG
GAGAGTGAAGAGGAGGAGTCGTCCGAGGAAGATGGCTCTGATGAGGAAGA
ATCTTCCTCTGACGAAGACACCGACGACGACGACGAGGAAGAGGAAGAGG
AAGAGGAAGAAAAGGCTGCACCCGTTGAGGTGGTGCCGGAACCCGAGGAG
AGTGAGGAACCCGTGGAGGTGGCTGTCTGGACTCCCCTGGTCACCGAGGA
GGAAACCCCCGACGTGCATCTGGATACCTCCGCCCTGCTGGCCCCCAGCA
GCTACGCCCGCTCGATTTCCCGCAGCACCCTGCACAGTGATCTGCTCACA
TCTCTGAATGCCTGGCTGCAGGTCCCCGCCCGCCCGCTGGCCTTCATTCG
CCAGGTTATCACCGAGCTGCAGGACTCGACCGGCATGCTGGCCGACGTGC
AGGACCAAGCCGCGCTGCGCGACCAGCGCACCCCGGCCCACCTGGTGTAC
GGACCCGCACAGTGCATGAACAGTGCGGCGTACCTGTTTGTGCGCGCCGC
CCGCATTGTCACCAGCCTCAACTGCCCCGGCATGCTGGACGGGCTGCTGC
AGGAACTGGAGGCGCACTTTGTCGGCCAGTCGTGGGAGCTGAACTGGCGC
TTCTCGACCCACTGCCCCGGCGAGACCGAGTATCTGGCCATGGTGGACCA
GAAGGCCGGCGCCAGCTTCCGTCTGCTGACGCGCCTCATGCAGGCGGCCA
GCATGGGCGGCGCGACCCTGGACTTGGAGCCTTTCACCAAGGTGCTGGGT
CGCTTGTCGCAGATCCGCCACGAGTACCTGGGTCTGCTGGAGTCCGCGGC
CAGCGACCGCTCGTTCGGCGAGGACCTGGATCAGGCCAAGGTGACGTACC
CCATCGTGCGGGCCTGCAACCTGGACCCTGCTGGCCGGGCGGTCATCTTT
GGCATCTTCCGCCAGAAGCCGGCGGGCACGGTCCTCCCCATCGAGAGTAA
GCGCCAGATCGTGTCGCTGGTGCAACAGACCGGGGCGCTGCAGGCCACCT
ACGACCTGATCCGGCAGCTGGGCCGCGAGGCCATGAACACGCTGAGCGAG
CTGGAGACGGCGGCGGAGGAGCTGAACCCGTCGTTGCGCGCGGTGGTGAA
GTCTCTGGTTGAGGTGCCGGCCCCGGATCACCTGTAAATGTTCAAGCAGT
ACTCCCACATCCTGTCCCACAAGAGGCGTCGCAGCAGGGGAAGCACCATC
AACCAAGTCCTGTCGGGCGCTCAGTCGGAGCCTGCATCCGAAGCAGCCAC
TGTCAGCGAGCCCGTCGAAGTATGGACGCACTCGCAGGTGCTGCCCGAGG
ATGATGAGCATCGCAAGGACTGCTTCACCACCCTGACCCCGCGCATTCAC
AAGTACGACCATGTCGCCCAGCGCGGCAGCGATCGCTTCGTCCAGGACCT
GACGGCAGCGCTGAACCTGGATGAGCCCCAGACCAGCTACCTTTCCTCCC
CCGTCGGCAACTATGCCAGCTTCCTCTACCCAGAGTGTCTGCCCGAACGT
CTTGAGACTGTCGCTTATTTGACGGAACTGGGCAATCTGCATGATGGCAA
ACAACAAGGCAAGAAAACCGATGAATCCGCCGAATCCCCCCGTGTCGCTG
CCCGGAAGCAACTGCTGGAAAAGGCCATGTCGGAGCTGTCGGACAAGGAC
AAGGATGGCCACGAGATCATCGACTGCTACCGCAGTAACTGGCTGGTCAC
CCCGGAGGTCCCCACGGCCGAGAACTGCGCCAACCTCGACGACTATGTCG
CCCGGAGACGCCTCAATGCGGGCATTGACGTCTACTGGACCCTCATGGGC
TTCGCGCACGGCACTCGTCTCGGAAAAGAGGACCAGGCGGTGGTGCGCGA
CGCACTGGATGCCGCCGAGCGCACCATGTTCTTCACCAACGACTACTACA
GCTGGCCCAAGGAGAAGCGCGTCTCCAAGAAGAAGCCCGTCGCCAACGTG
ATTCTCTTCCTCATGGAACACCAGAACATGTCCGAGGAGGATGCCGTCGC
CAAGGCGAAGCAGCTGATCATCGACAACGAGCACGAGTTTGTCCGCCGTC
GCGAGGCGCTCTACCAGGCCAACTCGGACCTGGCACCACAGCTCCGCAAA
TGGATGGAGGTGCTGGGCGCCTCCCTGGCTGGTATTCACTACTGGTGTAA
GAATGCTCCGCGCTATGCGGTCCCCGAAACCGCAGAGGAGAGTGAAGAGG
AGGAGTCGTCCGAGGAAGATGGCTCTGATGAGGAAGAATCTTCCTCTGAC
GAAGACACCGACGACGACGACGAGGAAGAGGAAGAGGAAGAGGAAGAAAA
GGCTGCACCCGTTGAGGTGGTGCCGGAACCCGAGGAGAGTGAGGAACCCG
TGGAGGTGGCTGTCTGGACTCCCCTGGTCACCGAGGAGGAAACCCCCGAC
GTGCATCTGGATACCTCCGCCCTGCTGGCCCCCAGCAGCTACGCCCGCTC
GATTTCCCGCAGCACCCTGCACAGTGATCTGCTCACATCTCTGAATGCCT
GGCTGCAGGTCCCCGCCCGCCCGCTGGCCTTCATTCGCCAGGTTATCACC
GAGCTGCAGGACTCGACCGGCATGCTGGCCGACGTGCAGGACCAAGCCGC
GCTGCGCGACCAGCGCACCCCGGCCCACCTGGTGTACGGACCCGCACAGT
GCATGAACAGTGCGGCGTACCTGTTTGTGCGCGCCGCCCGCATTGTCACC
AGCCTCAACTGCCCCGGCATGCTGGACGGGCTGCTGCAGGAACTGGAGGC
GCACTTTGTCGGCCAGTCGTGGGAGCTGAACTGGCGCTTCTCGACCCACT
GCCCCGGCGAGACCGAGTATCTGGCCATGGTGGACCAGAAGGCCGGCGCC
AGCTTCCGTCTGCTGACGCGCCTCATGCAGGCGGCCAGCATGGGCGGCGC
GACCCTGGACTTGGAGCCTTTCACCAAGGTGCTGGGTCGCTTGTCGCAGA
TCCGCCACGAGTACCTGGGTCTGCTGGAGTCCGCGGCCAGCGACCGCTCG
TTCGGCGAGGACCTGGATCAGGCCAAGGTGACGTACCCCATCGTGCGGGC
CTGCAACCTGGACCCTGCTGGCCGGGCGGTCATCTTTGGCATCTTCCGCC
AGAAGCCGGCGGGCACGGTCCTCCCCATCGAGAGTAAGCGCCAGATCGTG
TCGCTGGTGCAACAGACCGGGGCGCTGCAGGCCACCTACGACCTGATCCG
GCAGCTGGGCCGCGAGGCCATGAACACGCTGAGCGAGCTGGAGACGGCGG
CGGAGGAGCTGAACCCGTCGTTGCGCGCGGTGGTGAAGTCTCTGGTTGAG
GTGCCGGCCCCGGATCACCTGTAAATGTTCAAGCAGTACTCCCACATCCT
GTCCCACAAGAGGCGTCGCAGCAGGGGAAGCACCATCAACCAAGTCCTGT
CGGGCGCTCAGTCGGAGCCTGCATCCGAAGCAGCCACTGTCAGCGAGCCC
GTCGAAGTATGGACGCACTCGCAGGTGCTGCCCGAGGATGATGAGCATCG
CAAGGACTGCTTCACCACCCTGACCCCGCGCATTCACAAGTACGACCATG
TCGCCCAGCGCGGCAGCGATCGCTTCGTCCAGGACCTGACGGCAGCGCTG
AACCTGGATGAGCCCCAGACCAGCTACCTTTCCTCCCCCGTCGGCAACTA
TGCCAGCTTCCTCTACCCAGAGTGTCTGCCCGAACGTCTTGAGACTGTCG
CTTATTTGACGGAACTGGGCAATCTGCATGATGGCAAACAACAAGGCAAG
AAAACCGATGAATCCGCCGAATCCCCCCGTGTCGCTGCCCGGAAGCAACT
GCTGGAAAAGGCCATGTCGGAGCTGTCGGACAAGGACAAGGATGGCCACG
AGATCATCGACTGCTACCGCAGTAACTGGCTGGTCACCCCGGAGGTCCCC
ACGGCCGAGAACTGCGCCAACCTCGACGACTATGTCGCCCGGAGACGCCT
CAATGCGGGCATTGACGTCTACTGGACCCTCATGGGCTTCGCGCACGGCA
CTCGTCTCGGAAAAGAGGACCAGGCGGTGGTGCGCGACGCACTGGATGCC
GCCGAGCGCACCATGTTCTTCACCAACGACTACTACAGCTGGCCCAAGGA
GAAGCGCGTCTCCAAGAAGAAGCCCGTCGCCAACGTGATTCTCTTCCTCA
TGGAACACCAGAACATGTCCGAGGAGGATGCCGTCGCCAAGGCGAAGCAG
CTGATCATCGACAACGAGCACGAGTTTGTCCGCCGTCGCGAGGCGCTCTA
CCAGGCCAACTCGGACCTGGCACCACAGCTCCGCAAATGGATGGAGGTGC
TGGGCGCCTCCCTGGCTGGTATTCACTACTGGTGTAAGAATGCTCCGCGC
TATGCGGTCCCCGAAACCGCAGAGGAGAGTGAAGAGGAGGAGTCGTCCGA
GGAAGATGGCTCTGATGAGGAAGAATCTTCCTCTGACGAAGACACCGACG
ACGACGACGAGGAAGAGGAAGAGGAAGAGGAAGAAAAGGCTGCACCCGTT
GAGGTGGTGCCGGAACCCGAGGAGAGTGAGGAACCCGTGGAGGTGGCTGT
CTGGACTCCCCTGGTCACCGAGGAGGAAACCCCCGACGTGCATCTGGATA
CCTCCGCCCTGCTGGCCCCCAGCAGCTACGCCCGCTCGATTTCCCGCAGC
ACCCTGCACAGTGATCTGCTCACATCTCTGAATGCCTGGCTGCAGGTCCC
CGCCCGCCCGCTGGCCTTCATTCGCCAGGTTATCACCGAGCTGCAGGACT
CGACCGGCATGCTGGCCGACGTGCAGGACCAAGCCGCGCTGCGCGACCAG
CGCACCCCGGCCCACCTGGTGTACGGACCCGCACAGTGCATGAACAGTGC
GGCGTACCTGTTTGTGCGCGCCGCCCGCATTGTCACCAGCCTCAACTGCC
CCGGCATGCTGGACGGGCTGCTGCAGGAACTGGAGGCGCACTTTGTCGGC
CAGTCGTGGGAGCTGAACTGGCGCTTCTCGACCCACTGCCCCGGCGAGAC
CGAGTATCTGGCCATGGTGGACCAGAAGGCCGGCGCCAGCTTCCGTCTGC
TGACGCGCCTCATGCAGGCGGCCAGCATGGGCGGCGCGACCCTGGACTTG
GAGCCTTTCACCAAGGTGCTGGGTCGCTTGTCGCAGATCCGCCACGAGTA
CCTGGGTCTGCTGGAGTCCGCGGCCAGCGACCGCTCGTTCGGCGAGGACC
TGGATCAGGCCAAGGTGACGTACCCCATCGTGCGGGCCTGCAACCTGGAC
CCTGCTGGCCGGGCGGTCATCTTTGGCATCTTCCGCCAGAAGCCGGCGGG
CACGGTCCTCCCCATCGAGAGTAAGCGCCAGATCGTGTCGCTGGTGCAAC
AGACCGGGGCGCTGCAGGCCACCTACGACCTGATCCGGCAGCTGGGCCGC
GAGGCCATGAACACGCTGAGCGAGCTGGAGACGGCGGCGGAGGAGCTGAA
CCCGTCGTTGCGCGCGGTGGTGAAGTCTCTGGTTGAGGTGCCGGCCCCGG
ATCACCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012870-T1.utr5p1 | KJC3_012870-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012870-T1.utr3p1 | KJC3_012870-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.11 |
| Note | SMCOG1182:Polyprenyl synthetase |
| DBxref | InterPro:IPR000092 |
| DBxref | InterPro:IPR008949 |
| DBxref | PFAM:PF00348 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4813194..4816091 + |
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