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KJC3_012886-T1, KJC3_012886-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012886-T1
Unique NameKJC3_012886-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4846482..4848149+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012886-T1 ID=KJC3_012886-T1|Name=KJC3_012886-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1668bp|location=Sequence derived from alignment at ch8:4846482..4848149+ (Aspergillus niger KJC3)
CTGGGTAAACAATCAAAAGCGAGAATATTTTCAGTATCTTTGTCGACTTC
AGCGGGCAAATCTCGTGGCCCTGTTGGTCGTTCAGTCCAACATTTATATA
TAGTCTCGGCTAGTAGCTAAACATCTAGTACCTGTCGTATTGAGAGCTAG
AGATACACGTCTCTTTCATTCTTAACAGTAAGCATAAGAAGGAATTGAAG
TTTTTCTATCATATACCTAGCATCGACAAAGCGACCGGGGAAAGGAATCA
CATAGATATAAATATAGGCCTTATGATCGTGAAGAGTACCGACTTCGAAC
CCGAGATGTACAACTTCAGTACTATTTGATTGGTATAACCACTACTAACC
GACAGATCTCGACAAATCAGTCGGAGTCTCCATTGATCCCCTCAAAGTTG
CCATTTGGCTACTGATTTGTTCGACATATTTTTATTCATCAGGACCTCGA
TTCCAGCGGAAGTGGACTTGCCGTCTTCTATGCTCCGTTTGTCGATCATA
TAAAGATTTTACCAATTGACTAAAGTGACATTCTGAAGTAGGACATTCAA
CCTACCTCTGTACAACAAATCTAGAACCGCCCGGGACTCTCGTTATAAGC
AAGTATGAATAAGCAAAGAGGAACGAAGTCGCCGAAATGATTGCAAATTC
GGCGACGGTGACCCACCATGCAGCCTGCAGCCTTCCATCCTTCCCGGCAC
TATATATGGTCGGTCTTGATAGATCGAAGCCACAGAAAGTCTACCAAGAC
CTCAGACAAGCAAATACAGACTTCCATTCCTTCCGGGCCCCCAACACGAT
TCCTCCGAGCAAAAACCGCAAAGACCATGCAACCCATCACTCTCTACTCG
CACCCTATCGGGCCTAATCCGTGGAAGGTCGCCATCATCCTCTCTGCTCT
GCACATCCCCTACGAAATGATTATGATTGACTTCACCGAGGTGAAAAAGG
AGCCCTACGTGAGCCTCTGTCCCAATGGACGGCTGCCAACCATCGTGGAT
GCCAACAAGAACATCACCCTGTGGGAATCAGGCGCCATTGTGAACTACCT
GATTGAGACCTACGATCAGAGCCACCAGCTGAGCTATGACACCTTTCCTG
AACGCCACCAGCTGCAACAATGGCTGCATTTCCAAGTGTCCGGGCAAGGG
CCGTACTACGGACAGCTAGGCTGGTTCCGGCGGCAGCCCGAGCAGGTGCC
CCAGGCCATCGAACGCTACACGGCGGAGATCCGGCGCGTCATGAGCGTGC
TAGACCAGGTGTTGACGGACCGCGAATGGCTCGTGGGCGACAAGTGCACG
TATGCAGACCTCTCCTTTGTCCCCTGGCAGGATTTAGTGCCGTTGGTGGT
TGGGGACCAGCGCGTGGTACAGGAATTGACCGAGCAATTTCCCCATGTGG
AGGCGTGGATGCAGAGAATGAGGGCGAGACCAGAGGTACAGAAAGTGCTG
AAGGAGAAGAGCGAGGCGATGGCGTCGAATTAGGGGACAGCATGTAAATA
CAGGGGTCGGATAAAGACCATCTCATGGCTCTAATATTTTAGACTCGCCG
AAATAGTGGATCCTTCCCCGGGGGGCCCCCGGACAGGCAGACGCCGATTT
AACCCGTCACACCAGGGCATCAACTCTTGATTAGAGCTCAAGTTAGAATG
AGGTTGTTCCAATTTTAC
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Coding sequence (CDS) from alignment at ch8:4846482..4848149+

>KJC3_012886-T1 ID=KJC3_012886-T1|Name=KJC3_012886-T1|organism=Aspergillus niger KJC3|type=CDS|length=816bp|location=Sequence derived from alignment at ch8:4846482..4848149+ (Aspergillus niger KJC3)
ATGCAGCCTGCAGCCTTCCATCCTTCCCGGCACTATATATGGTCGGTCTT
GATAGATCGAAGCCACAGAAAGTCTACCAAGACCTCAGACAAGCAAATAC
AGACTTCCATTCCTTCCGGGCCCCCAACACGATTCCTCCGAGCAAAAACC
GCAAAGACCATGCAACCCATCACTCTCTACTCGCACCCTATCGGGCCTAA
TCCGTGGAAGGTCGCCATCATCCTCTCTGCTCTGCACATCCCCTACGAAA
TGATTATGATTGACTTCACCGAGGTGAAAAAGGAGCCCTACGTGAGCCTC
TGTCCCAATGGACGGCTGCCAACCATCGTGGATGCCAACAAGAACATCAC
CCTGTGGGAATCAGGCGCCATTGTGAACTACCTGATTGAGACCTACGATC
AGAGCCACCAGCTGAGCTATGACACCTTTCCTGAACGCCACCAGCTGCAA
CAATGGCTGCATTTCCAAGTGTCCGGGCAAGGGCCGTACTACGGACAGCT
AGGCTGGTTCCGGCGGCAGCCCGAGCAGGTGCCCCAGGCCATCGAACGCT
ACACGGCGGAGATCCGGCGCGTCATGAGCGTGCTAGACCAGGTGTTGACG
GACCGCGAATGGCTCGTGGGCGACAAGTGCACGTATGCAGACCTCTCCTT
TGTCCCCTGGCAGGATTTAGTGCCGTTGGTGGTTGGGGACCAGCGCGTGG
TACAGGAATTGACCGAGCAATTTCCCCATGTGGAGGCGTGGATGCAGAGA
ATGAGGGCGAGACCAGAGGTACAGAAAGTGCTGAAGGAGAAGAGCGAGGC
GATGGCGTCGAATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012886KJC3_012886Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012886-T1.utr5p1KJC3_012886-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012886-T1.exon1KJC3_012886-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012886-T1.cdsKJC3_012886-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012886-T1.utr3p1KJC3_012886-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012886-T1KJC3_012886-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR004046
DBxrefPFAM:PF13417
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4846482..4848149 +
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