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KJC3_012888-T1, KJC3_012888-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012888-T1
Unique NameKJC3_012888-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4850409..4851941-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012888-T1 ID=KJC3_012888-T1|Name=KJC3_012888-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1533bp|location=Sequence derived from alignment at ch8:4850409..4851941- (Aspergillus niger KJC3)
ATGTCATCTTCCAACCCTCCACGGGAGGTCCCCTGGCTCATCTGGGTCGT
GGCTATCTTTGGCTCCGTCTCATCCGCGGGCTTTGGCTTTGATCAGGGCT
GGTGGGCAAGTATTATGAGTTCGACGCAATTTACCCGTGTCTTTGGCTCC
TACGACCCAGCCCAGCAGGCCTGGTCCCTCAGCGATCGACAGCAGTCCCT
CGGCACGGGTCTGGGCTATGTAGGGGTCATCCTCGGGTTGGTGTGCGGCA
CACCACTGAACGAAAAATTTGGACGACGGAACAGTCTCTGGCTGCAGTCG
GTGGTGGTGACTGCTGGGGTCGCCATTGAAGCATCCTGCCAGGACAGCTA
CGCGCAATTCCTGGTGGGCAAGGCAGTCGTCTACTTCGCCGGTGGCATCG
CCTCAACGGTCATTCCGGTCTACCAAGGAGAGTGCGCACCTCAGCACCTC
CGAGGAATGATGACGAGTCTATACAATGCCTTCCTGATGGTAGGCGGCTT
TTGTGCCGCCCTCATCGTCTACCTCTGTCGCCATGTACCGAGCGACTGGG
CCTGGCGTAGTGTCGTGGTGGCGCAAGCAGCTATTCCCGCCATGGGGTGG
CTGAGCCTACCCTTCCTTCCTGAATCCCCATACTGGCTACTTCGCCGTGG
CCGTCGTGCTGCCGCCATCACCAGCCTGCGCCGGCTGCATGCCCTGGATG
CCGCTGCCGCTGAGGCCGAAATCATTTCCATTGAACAACAACTCGCACTG
CAGCAACAGCAACAACAACAAGAGAAGGAGCTCGCATCCTGGATGGCCTG
CTTCACAGACCCCATCCACTTCCGTCGGACTCTCATCGCTGTGGGCGCGC
AGATCTTCCAGCAGGCCCAGGGAATCTCCTTCGTGGCCAACTATCAGGCC
GTTTTTCTGGAACAGATCGGATTCCGCCAGGTCCTCTTGATGTCGGTGAT
TGTCTATATCATCGGCATAGTCGGCAATCTGACGGGGATGTTCATGGCTG
ACCGCCTGGGTCGTCGTAACGTGCTCCTCCCGGCATCCGGCATCCTCGGA
TCTTGTATGCTGACCATTGGCGGCCTCACCACCCCCTCCACATCCTCATC
TTCCCTCTCCATCGCGGTGGTGGTCATGCTCATGCTTTGGTTCTTTACCT
TCCAGAGCACATGGGGTCCGTTGGCCTGGGCAATCACCGCCGAAATCCCA
CCCACAGGAACCGCCGTCCGCGAGAAGATGGTTACGCTGGCGGGGTTTTC
GGCGTACGGCACCGGATTGATCATCGTCTTTGTGAATCCCTACACTCAGG
CCGCTATTGGGGGTAAGGTAGCCTTCATCTACGGCGCACTGTCCGTCGTT
GCGGCGGTATTTGTGTGGCTGTTTGTACCGGAGACCAAACGGCGTTCGTT
GGAGGAGATTGACGAGATGTTCGTCGCCCGAGTGCCGCCGCGTGAATTCG
GCATCTATCAGTGCCAGAGCGGTGCATTCGATGCAGAGAAAACCGTGGAT
GGCAAAACGTCAGTGGATGAAGAATGTGTCTGA
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Coding sequence (CDS) from alignment at ch8:4850409..4851941-

>KJC3_012888-T1 ID=KJC3_012888-T1|Name=KJC3_012888-T1|organism=Aspergillus niger KJC3|type=CDS|length=1533bp|location=Sequence derived from alignment at ch8:4850409..4851941- (Aspergillus niger KJC3)
ATGTCATCTTCCAACCCTCCACGGGAGGTCCCCTGGCTCATCTGGGTCGT
GGCTATCTTTGGCTCCGTCTCATCCGCGGGCTTTGGCTTTGATCAGGGCT
GGTGGGCAAGTATTATGAGTTCGACGCAATTTACCCGTGTCTTTGGCTCC
TACGACCCAGCCCAGCAGGCCTGGTCCCTCAGCGATCGACAGCAGTCCCT
CGGCACGGGTCTGGGCTATGTAGGGGTCATCCTCGGGTTGGTGTGCGGCA
CACCACTGAACGAAAAATTTGGACGACGGAACAGTCTCTGGCTGCAGTCG
GTGGTGGTGACTGCTGGGGTCGCCATTGAAGCATCCTGCCAGGACAGCTA
CGCGCAATTCCTGGTGGGCAAGGCAGTCGTCTACTTCGCCGGTGGCATCG
CCTCAACGGTCATTCCGGTCTACCAAGGAGAGTGCGCACCTCAGCACCTC
CGAGGAATGATGACGAGTCTATACAATGCCTTCCTGATGGTAGGCGGCTT
TTGTGCCGCCCTCATCGTCTACCTCTGTCGCCATGTACCGAGCGACTGGG
CCTGGCGTAGTGTCGTGGTGGCGCAAGCAGCTATTCCCGCCATGGGGTGG
CTGAGCCTACCCTTCCTTCCTGAATCCCCATACTGGCTACTTCGCCGTGG
CCGTCGTGCTGCCGCCATCACCAGCCTGCGCCGGCTGCATGCCCTGGATG
CCGCTGCCGCTGAGGCCGAAATCATTTCCATTGAACAACAACTCGCACTG
CAGCAACAGCAACAACAACAAGAGAAGGAGCTCGCATCCTGGATGGCCTG
CTTCACAGACCCCATCCACTTCCGTCGGACTCTCATCGCTGTGGGCGCGC
AGATCTTCCAGCAGGCCCAGGGAATCTCCTTCGTGGCCAACTATCAGGCC
GTTTTTCTGGAACAGATCGGATTCCGCCAGGTCCTCTTGATGTCGGTGAT
TGTCTATATCATCGGCATAGTCGGCAATCTGACGGGGATGTTCATGGCTG
ACCGCCTGGGTCGTCGTAACGTGCTCCTCCCGGCATCCGGCATCCTCGGA
TCTTGTATGCTGACCATTGGCGGCCTCACCACCCCCTCCACATCCTCATC
TTCCCTCTCCATCGCGGTGGTGGTCATGCTCATGCTTTGGTTCTTTACCT
TCCAGAGCACATGGGGTCCGTTGGCCTGGGCAATCACCGCCGAAATCCCA
CCCACAGGAACCGCCGTCCGCGAGAAGATGGTTACGCTGGCGGGGTTTTC
GGCGTACGGCACCGGATTGATCATCGTCTTTGTGAATCCCTACACTCAGG
CCGCTATTGGGGGTAAGGTAGCCTTCATCTACGGCGCACTGTCCGTCGTT
GCGGCGGTATTTGTGTGGCTGTTTGTACCGGAGACCAAACGGCGTTCGTT
GGAGGAGATTGACGAGATGTTCGTCGCCCGAGTGCCGCCGCGTGAATTCG
GCATCTATCAGTGCCAGAGCGGTGCATTCGATGCAGAGAAAACCGTGGAT
GGCAAAACGTCAGTGGATGAAGAATGTGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012888KJC3_012888Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012888-T1.cdsKJC3_012888-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012888-T1.exon1KJC3_012888-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012888-T1KJC3_012888-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4850409..4851941 -
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