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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4859149..4860381+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012891-T1 ID=KJC3_012891-T1|Name=KJC3_012891-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1233bp|location=Sequence derived from alignment at ch8:4859149..4860381+ (Aspergillus niger KJC3)
ATGAGTATCATCCTCATCAATTACCTCTCAGTTCATCGTGTCTCTAAGAT
ACCCTCACTCGGACCGTGGAAAAAAATGGTCAAGCTACTTCCTACCTTCG
TTTTCCAAGCTGGATTTGCTCTCGCGACAGCGGAGTATCTCAACTGGACC
ACGTACAGCGCCAACGGGGTAAATTTGGGCGGGTGGCTCGAGCAAGAAAG
CACCATCGATACTACTTGGTGGGCTAAATATTCCAAGGGTGCGGACGATG
AATGGGGCCTTTGTGTGAATCAAGGCTCCCAGTGTGGTCCTATTCTTGAG
CGAAGATATGCGACCTATATCACCACCTCAGATATCGATACGTTGGCGAA
CGCCGGAGTGAACACTTTGCGTATCCCCACCACATATGCTGCTTGGGTCA
AAGTGCCCGGGTCCCAGCTGTACTCTGGGAACCAGGTATCCTTTCTGAAC
AACATTGCAACATATGCTATCACTAGGTATTCCATGCATATCATCATCGA
TGTACACTCCTTACCAGGTGGAGTGAACGGTAAGGCGTTCGGGGAGGCAA
CAGGACATTACGGATGGTTCAACAACCAAACGGCGTTGGATTACTCCCTT
CAGGCTATCGATTCCGTCATTGCCTATATTCAGAACTCCAGCAATCCTGG
ATCCTATACTATTGAGCCTATCAACGAGCCCGTCGACAATAAAGATATGT
CAGCATTCGGGAGTCCAGAAGCATTATCCGATGAAGGCGCAGCTTGGGTT
TTGAAGTACATTCAGGCAGTACTGGACAAGGTTGAGGTGATCAGCCCGGA
TATACCGGTCATGTTCCAAGGCAGTTTCCGAGGCGAGGAGTACTGGTCAC
CCAACTTCTCTACATCCGCTAACCTGGTATTCGATGTGCACAACTATTAT
TTTGCCGGACGAGGAGCAACCGGTAAGAATATTACGACCTACATCTGTGC
CGATGCAAAGAATGGAGCCGGTGATGGCAAATTTCCCGTATTTGTCGGCG
AATGGTCGATCCAGGCACAGTACAATAACTCCTTTGCTGACAGAGATGAA
GCTCTCAACACCGGGCTCTATGCTTCTGCGAAAGATTCCCAGGGGAGTGC
CTATTGGAATGCCAAGTTTTCGGGGAATGCAACCGTCGACGGCCAAGGTA
CACAGGCTGACTACTGGAATTACATGACCTGGATTGACAATGACATGATC
CATCCGGACGAAGCTTCTGGGGTGTGTGCATAG back to topCoding sequence (CDS) from alignment at ch8:4859149..4860381+ >KJC3_012891-T1 ID=KJC3_012891-T1|Name=KJC3_012891-T1|organism=Aspergillus niger KJC3|type=CDS|length=1233bp|location=Sequence derived from alignment at ch8:4859149..4860381+ (Aspergillus niger KJC3)
ATGAGTATCATCCTCATCAATTACCTCTCAGTTCATCGTGTCTCTAAGAT
ACCCTCACTCGGACCGTGGAAAAAAATGGTCAAGCTACTTCCTACCTTCG
TTTTCCAAGCTGGATTTGCTCTCGCGACAGCGGAGTATCTCAACTGGACC
ACGTACAGCGCCAACGGGGTAAATTTGGGCGGGTGGCTCGAGCAAGAAAG
CACCATCGATACTACTTGGTGGGCTAAATATTCCAAGGGTGCGGACGATG
AATGGGGCCTTTGTGTGAATCAAGGCTCCCAGTGTGGTCCTATTCTTGAG
CGAAGATATGCGACCTATATCACCACCTCAGATATCGATACGTTGGCGAA
CGCCGGAGTGAACACTTTGCGTATCCCCACCACATATGCTGCTTGGGTCA
AAGTGCCCGGGTCCCAGCTGTACTCTGGGAACCAGGTATCCTTTCTGAAC
AACATTGCAACATATGCTATCACTAGGTATTCCATGCATATCATCATCGA
TGTACACTCCTTACCAGGTGGAGTGAACGGTAAGGCGTTCGGGGAGGCAA
CAGGACATTACGGATGGTTCAACAACCAAACGGCGTTGGATTACTCCCTT
CAGGCTATCGATTCCGTCATTGCCTATATTCAGAACTCCAGCAATCCTGG
ATCCTATACTATTGAGCCTATCAACGAGCCCGTCGACAATAAAGATATGT
CAGCATTCGGGAGTCCAGAAGCATTATCCGATGAAGGCGCAGCTTGGGTT
TTGAAGTACATTCAGGCAGTACTGGACAAGGTTGAGGTGATCAGCCCGGA
TATACCGGTCATGTTCCAAGGCAGTTTCCGAGGCGAGGAGTACTGGTCAC
CCAACTTCTCTACATCCGCTAACCTGGTATTCGATGTGCACAACTATTAT
TTTGCCGGACGAGGAGCAACCGGTAAGAATATTACGACCTACATCTGTGC
CGATGCAAAGAATGGAGCCGGTGATGGCAAATTTCCCGTATTTGTCGGCG
AATGGTCGATCCAGGCACAGTACAATAACTCCTTTGCTGACAGAGATGAA
GCTCTCAACACCGGGCTCTATGCTTCTGCGAAAGATTCCCAGGGGAGTGC
CTATTGGAATGCCAAGTTTTCGGGGAATGCAACCGTCGACGGCCAAGGTA
CACAGGCTGACTACTGGAATTACATGACCTGGATTGACAATGACATGATC
CATCCGGACGAAGCTTCTGGGGTGTGTGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH5_14 |
| Note | CAZy:GH5_15 |
| Note | CAZy:GH5_44 |
| Note | CAZy:GH5_9 |
| Note | CAZy:GH5_23 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001547 |
| DBxref | PFAM:PF00150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4859149..4860381 + |
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