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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4865717..4867143+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012894-T1 ID=KJC3_012894-T1|Name=KJC3_012894-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1427bp|location=Sequence derived from alignment at ch8:4865717..4867143+ (Aspergillus niger KJC3)
GGGGATTTCCAGATTCTTAACCGAAGCCTCATTCTCTGGCCAATTTTGAT
CTTCTTCAACATGACTGCATGAAAATATGTCGAACCAAGCAGGCTGGGTC
AAAACCCCATATGGGCGAGTTCAGGTCGAGCCTGTAGAGCAATGGGTTCC
TGGCCGTGGGGAACTCTTGGTTCGGGTTGAAGCAGCTAGCTTTAACCCCA
TTGACGCCAAAATCCAGAGGTACCGTGCCCGAATATCTGCCAGCTGGCCG
TCAAACTAAAATCTCAGGTTGGATCTATTCCAATCTCAATACCCCCTCAT
CCTCGGATTCACCTTTGCGGGAACGGTAGTCTCTACAGGGCCCGAGATTA
ATTCCGTGCAACCTGGCGACCGGGTGGTGGTGGCTCGCTGGGGCCAGCAA
GCAGGCGAGGATCCCCGATTTGGGGCCCTCCAGAGGTATGCACTGGCACT
CGAGCAAAACACCCTGCGACTAGAGCCCGAGACCACATTTGCCGATGCCG
CCGGTCTGATCGCCAATCTGGCGACCGTGGTCTCCGCCCTCACCATCTAC
ATGGGCCTCTCTAAGCCGCCAGTCACCGGCACGACACCACCCATAGGAAA
GAAAATCCTCGTATACGGCGGTTCATCAGCGGTTGGGGGCCTCGCGGTGC
AATATGCGATCAATGCTGGGTATGACGTTGTCACTACCTCGTCCGCGGCC
AACAGATCCATGGTGGAGAAACGCAACCCGACGCATATCATCGACCATAG
CCGCTCCGACGAAGACGTAATCCGCGAAATTCGGGAGAATGGGCCTTACG
AGGGAATCTTCGAGGCGATCGGCTCCACCACAACAACCCAACGCATGGTG
GCATTGCTACGCGAAACAGGGGGCAGGTTCTTTTCTACCAGCCCTTCCCC
TGGGGATGAGACCATCCCTGCTGGTATAGTAAAGGTATGGGCCGGATATT
CTGAGACCCTCGTATCTGAGGCTGCCCATCAACAACTGCGCACATGGTAC
ATGGAAGCGTATTTACCGGCTGCACTGAAGAAAGGCACGATGTGGCCGAG
TCCGGCATTGTGGCTGGAAGGCGGGCTTGGCTCCGCCCAGAAGGCATTGG
ACCTCCTGTATGAAGGTCACATCAGCGGCCGAAAGGTTTTCATCAACCCA
CAGGAATAAGAAAGCTGTGGTTCGGGAAGCCCGGTATCAATCTCTTGTCA
GGCTCAACATACAATAGGAATTTAGATGCCAATGACCGTATTGGGCTCAC
CAACTTGCTACATATTGAAGCAGTAATACTAGTAGGCTTGATCATGTGGC
TAGATCATGCTTTGCCTGCCACGTGTGAGACCTCGGCTTTCATGCCTTAT
CAAATGATCCCCACTTGGTACTTAGTTACATGATCTAATCTACTTTAATA
ACCGAAGATGATTTTAGAAGTCTAGAG back to topCoding sequence (CDS) from alignment at ch8:4865717..4867143+ >KJC3_012894-T1 ID=KJC3_012894-T1|Name=KJC3_012894-T1|organism=Aspergillus niger KJC3|type=CDS|length=2070bp|location=Sequence derived from alignment at ch8:4865717..4867143+ (Aspergillus niger KJC3)
ATGTCGAACCAAGCAGGCTGGGTCAAAACCCCATATGGGCGAGTTCAGGT
CGAGCCTGTAGAGCAATGGGTTCCTGGCCGTGGGGAACTCTTGGTTCGGG
TTGAAGCAGCTAGCTTTAACCCCATTGACGCCAAAATCCAGAGGTTGGAT
CTATTCCAATCTCAATACCCCCTCATCCTCGGATTCACCTTTGCGGGAAC
GGTAGTCTCTACAGGGCCCGAGATTAATTCCGTGCAACCTGGCGACCGGG
TGGTGGTGGCTCGCTGGGGCCAGCAAGCAGGCGAGGATCCCCGATTTGGG
GCCCTCCAGAGGTATGCACTGGCACTCGAGCAAAACACCCTGCGACTAGA
GCCCGAGACCACATTTGCCGATGCCGCCGGTCTGATCGCCAATCTGGCGA
CCGTGGTCTCCGCCCTCACCATCTACATGGGCCTCTCTAAGCCGCCAGTC
ACCGGCACGACACCACCCATAGGAAAGAAAATCCTCGTATACGGCGGTTC
ATCAGCGGTTGGGGGCCTCGCGGTGCAATATGCGATCAATGCTGGGTATG
ACGTTGTCACTACCTCGTCCGCGGCCAACAGATCCATGGTGGAGAAACGC
AACCCGACGCATATCATCGACCATAGCCGCTCCGACGAAGACGTAATCCG
CGAAATTCGGGAGAATGGGCCTTACGAGGGAATCTTCGAGGCGATCGGCT
CCACCACAACAACCCAACGCATGGTGGCATTGCTACGCGAAACAGGGGGC
AGGTTCTTTTCTACCAGCCCTTCCCCTGGGGATGAGACCATCCCTGCTGG
TATAGTAAAGGTATGGGCCGGATATTCTGAGACCCTCGTATCTGAGGCTG
CCCATCAACAACTGCGCACATGGTACATGGAAGCGTATTTACCGGCTGCA
CTGAAGAAAGGCACGATGTGGCCGAGTCCGGCATTGTGGCTGGAAGGCGG
GCTTGGCTCCGCCCAGAAGGCATTGGACCTCCTGTATGAAGGTCACATCA
GCGGCCGAAAGGTTTTCATCAACCCACAGGAATAAATGTCGAACCAAGCA
GGCTGGGTCAAAACCCCATATGGGCGAGTTCAGGTCGAGCCTGTAGAGCA
ATGGGTTCCTGGCCGTGGGGAACTCTTGGTTCGGGTTGAAGCAGCTAGCT
TTAACCCCATTGACGCCAAAATCCAGAGGTTGGATCTATTCCAATCTCAA
TACCCCCTCATCCTCGGATTCACCTTTGCGGGAACGGTAGTCTCTACAGG
GCCCGAGATTAATTCCGTGCAACCTGGCGACCGGGTGGTGGTGGCTCGCT
GGGGCCAGCAAGCAGGCGAGGATCCCCGATTTGGGGCCCTCCAGAGGTAT
GCACTGGCACTCGAGCAAAACACCCTGCGACTAGAGCCCGAGACCACATT
TGCCGATGCCGCCGGTCTGATCGCCAATCTGGCGACCGTGGTCTCCGCCC
TCACCATCTACATGGGCCTCTCTAAGCCGCCAGTCACCGGCACGACACCA
CCCATAGGAAAGAAAATCCTCGTATACGGCGGTTCATCAGCGGTTGGGGG
CCTCGCGGTGCAATATGCGATCAATGCTGGGTATGACGTTGTCACTACCT
CGTCCGCGGCCAACAGATCCATGGTGGAGAAACGCAACCCGACGCATATC
ATCGACCATAGCCGCTCCGACGAAGACGTAATCCGCGAAATTCGGGAGAA
TGGGCCTTACGAGGGAATCTTCGAGGCGATCGGCTCCACCACAACAACCC
AACGCATGGTGGCATTGCTACGCGAAACAGGGGGCAGGTTCTTTTCTACC
AGCCCTTCCCCTGGGGATGAGACCATCCCTGCTGGTATAGTAAAGGTATG
GGCCGGATATTCTGAGACCCTCGTATCTGAGGCTGCCCATCAACAACTGC
GCACATGGTACATGGAAGCGTATTTACCGGCTGCACTGAAGAAAGGCACG
ATGTGGCCGAGTCCGGCATTGTGGCTGGAAGGCGGGCTTGGCTCCGCCCA
GAAGGCATTGGACCTCCTGTATGAAGGTCACATCAGCGGCCGAAAGGTTT
TCATCAACCCACAGGAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012894-T1.utr5p1 | KJC3_012894-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012894-T1.utr3p1 | KJC3_012894-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011032 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013154 |
| DBxref | InterPro:IPR013149 |
| DBxref | InterPro:IPR020843 |
| DBxref | PFAM:PF00107 |
| DBxref | PFAM:PF08240 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4865717..4867143 + |
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