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KJC3_012896-T1, KJC3_012896-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012896-T1
Unique NameKJC3_012896-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4870958..4871842-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012896-T1 ID=KJC3_012896-T1|Name=KJC3_012896-T1|organism=Aspergillus niger KJC3|type=mRNA|length=885bp|location=Sequence derived from alignment at ch8:4870958..4871842- (Aspergillus niger KJC3)
ATGGCTCTTTCGCAGGTTCCAAGTCTAGTGCACGGAAGACTGCCTTCTTC
CTTGGAGGAACCAGACGAGGAGGGAATCTGGACTCCCCTCCAGCTGGCCG
CCGCACAAGGCAACCTACCCGAAGTGAAGGCTCTTTTGTCTCAGCCCTCA
AGCAACCCCAACGAGCCTCCCAGAGGTTACTACGGCCAGACTGCACTCCA
GGCGGCCTCGCTCAACGGTCATCTTGATGTGGTCGAAACGCTCTTAGCCG
CTGGGGCCGATGTGAATGCTCCCGGGGGCAACAACGGCGGCCGAACCGCC
CTCACCCTCGCCGCAGGTGCCGGCCACTTCCAGATCGTTCGCCATCTAGT
CATCGCCGCAGGTGCGGACGTCAAGCAGCCAGCCCACAAATACGTGGGGC
GCACCGCCCTGCAGGCCGCTGCGGAGGGAGGCCATCTCGAGATCTTACAG
TGGCTGTTACAACACCAGCCGGTTACGGAAATCAACGCGCCCCCCGCGAA
CAACCGGGGTCGGACCGTGCTGCAGGCCGCAGCGTTTGGTGGCTATGATG
ACATGGTAGAGTTTTTACTTCATGTCGGTGCGGACGTGAATGCACCACCC
TGCAGATACCATGGCGTTACAGCGCTTCAGGGCGCGGCCTTCAACGGTCA
CCGCACCACCGTCCTTCGACTCTTGACGGCCGGGGCGGATGTGAACGCTC
CCGGGGGCCGGTACAATGGCTACACGGCGCTGGCAGCAGCAGCAGAAGGC
GGCCATGCGGACATTGTGCGACTCTTGTTGGACGCCGGCGCAGATGTCGC
CATGGTATCCGGAAATAAAAATTGGACAGCGTTGCGGTTTGCGGTGTGGC
GGGGACAGAAAGAGATCGTGCGGCTTTTGAACTAG
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Coding sequence (CDS) from alignment at ch8:4870958..4871842-

>KJC3_012896-T1 ID=KJC3_012896-T1|Name=KJC3_012896-T1|organism=Aspergillus niger KJC3|type=CDS|length=885bp|location=Sequence derived from alignment at ch8:4870958..4871842- (Aspergillus niger KJC3)
ATGGCTCTTTCGCAGGTTCCAAGTCTAGTGCACGGAAGACTGCCTTCTTC
CTTGGAGGAACCAGACGAGGAGGGAATCTGGACTCCCCTCCAGCTGGCCG
CCGCACAAGGCAACCTACCCGAAGTGAAGGCTCTTTTGTCTCAGCCCTCA
AGCAACCCCAACGAGCCTCCCAGAGGTTACTACGGCCAGACTGCACTCCA
GGCGGCCTCGCTCAACGGTCATCTTGATGTGGTCGAAACGCTCTTAGCCG
CTGGGGCCGATGTGAATGCTCCCGGGGGCAACAACGGCGGCCGAACCGCC
CTCACCCTCGCCGCAGGTGCCGGCCACTTCCAGATCGTTCGCCATCTAGT
CATCGCCGCAGGTGCGGACGTCAAGCAGCCAGCCCACAAATACGTGGGGC
GCACCGCCCTGCAGGCCGCTGCGGAGGGAGGCCATCTCGAGATCTTACAG
TGGCTGTTACAACACCAGCCGGTTACGGAAATCAACGCGCCCCCCGCGAA
CAACCGGGGTCGGACCGTGCTGCAGGCCGCAGCGTTTGGTGGCTATGATG
ACATGGTAGAGTTTTTACTTCATGTCGGTGCGGACGTGAATGCACCACCC
TGCAGATACCATGGCGTTACAGCGCTTCAGGGCGCGGCCTTCAACGGTCA
CCGCACCACCGTCCTTCGACTCTTGACGGCCGGGGCGGATGTGAACGCTC
CCGGGGGCCGGTACAATGGCTACACGGCGCTGGCAGCAGCAGCAGAAGGC
GGCCATGCGGACATTGTGCGACTCTTGTTGGACGCCGGCGCAGATGTCGC
CATGGTATCCGGAAATAAAAATTGGACAGCGTTGCGGTTTGCGGTGTGGC
GGGGACAGAAAGAGATCGTGCGGCTTTTGAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012896KJC3_012896Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012896-T1.cdsKJC3_012896-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012896-T1.exon1KJC3_012896-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012896-T1KJC3_012896-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4870958..4871842 -
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