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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4896220..4899049+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012906-T1 ID=KJC3_012906-T1|Name=KJC3_012906-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2830bp|location=Sequence derived from alignment at ch8:4896220..4899049+ (Aspergillus niger KJC3)
GTTGTACACAGCTGAGTAGGTACCCCAAAGCAGTTCCCCACCCAAGCAAT
AACTAGTACATGTGTTAGTAGAATGCCATGTGCTACTACTATCGAGATAA
TTTTAGTAAGTGATAAGGTACACAAATACTAGAAGTGGCATATGATTGGA
CCAGCTACAGTCGAACCCCGCGAGGCGGAACTACCAACTAGTGAGATTCA
TGACAAGGCTGTCAGACACATCTAAGATCAGCCGCAACGCCCCAACAAAA
TCCTGTCCCCCAATTCTGAAAGAAGGGCACCGATATTATTACAATGAGAG
AACGCCAACCTCATCGCGAAGACTACACCGTAGGCTGGGTCTGCGCTCTG
CCGATCGAACTAGCAGCCGCACAAGCAATGCTAGACACCGAACACTCCAG
CATACGCCTGCAGATCGATGATCCCAGCATATTCATCCTAGGAAATATAG
CCGGGCACAATGTTGTGATTACATGTCTCCCAGATGGACAAATAGGCACC
AGCTCCGCTGCGACCGTGGCAATCCAAATGCGCTCCGCGTTTCCGTCAAT
CAGGTTCGGTCTCATGGTGGGAATCGGCGGGGGCGTCCCCAGCCCTGAGC
ATGACATTCGGCTGGGAGATGTGGTCGTCGGTCGACCGGATAATCAAACT
GGGGGTGTGGTGCAGTATGATTTTGGGAAGAGCACATCGAGTGGGTTTGT
ACGCACGGGGTTTTTGAATGCGCCCCCGCTTATCTTGTTGAATGCAGTAG
CCCTGTTACGGGCGAGGCATTTTCTGGGGAGGGGAACGATGACTGAGTAT
ACGGAAAAGTTGAAGGAAATGCCTGCTTTTACGCGCGATAAATATAAAAA
TAAGGATATCCTGTTCGAGGCGGAGTATAACCATGCTGGAGGTGTGACGT
GTGAGAAATGCGATGAGGAACGATCGATCCAACGCGATGAACGTGAAGGT
CATGGCATTATGGTGCATTATGGAACAATTGCGTCAGGGAATCAAGTACT
CAAGGACGCGCATGAGCGAGACCGACTCGCAGCAGAATTGGGAGGGGTGT
TGTGCTTTGAGATGGAGGCTGCCGGGCTGGTAAATAATTTCCCATGCTTG
GTAATCCGAGGCATTTGTGACTATGCCGACTCGCATAAGAATAAGAATTG
GCAACCTTCTGCTGCCGGGGTCGCCGCTGCTTATGCGAAGGAGTTGTTGT
CGGTTATACCACCAGGGCATGTGGAGAGAACGAAGCCCATGAGGAGAAAT
GGTCTGTATTCACTCTTTGTTTGTTGCGAGAGTATATGCCCTGCTGACTG
TTTGTCGCAGCACCCAGAAAAACCTTCATGGTTCCCTTTCAGAGGAATGG
AAATTTCGCTGGCCGGGATTCTATAATGAGCGAGCTTGATAGAAGATATG
ATACAGCCGCTTTTGAACATTATCTCGGTATAGCTCTCGTTGGAAATAAA
GGCATAGGGTGAGAAAGTCATTCTCATACCAATCATGATAACTCTCACTA
AGACAGATTCAGTAAAACATACATCGCCCTAGAGTATGCCTACCGAAGCC
AACAACACATGCCCTGGCTATCCGTATTCTGGATATACGCCAGCAGCATC
TCCCGATACAGAAGGTCGTATCAAGATCTAGCTGACCGTCTTGATCTACC
CGGAAAAGACGACCCAGCAGTCGATATTGTGGAACTGGTATCGGACTGGC
TCACTGATGAAGAAAATGGGCCATGGCTGATGATTCTGGACAATGTGAAA
AATGTAGGTCTTTCCCAAGAGACGGGGCTTCCTGTTCTGCTGGAGGATGA
CGTGACGGAGAAGATTCCGATTTTTTCGTTGTCTCCAGAAGCAAAACATG
GCTCTTTGCTGGTGACGTCGCGCAATTTGGAGGCAGCGATGAGTATCGTC
GGTTCAGCTGAGAACATTGTCCATGTGCAGCAGATGGATGAAGGGCCAAA
AAGCTTACTTGATAATGGGAAAGATCTGCTGGCGAACCTTAATCTGAACA
GCCCCAAAGATGGTCGGACACCACTATCGTGGGCTGCAGAAGCAGGTATT
GTGCCAGTCGTGAAATTGTTGCTTGCTACTGGTAAAGTGGACGTCGACAC
CAGAGACTCACATTATGGTCGAACGGCTTTATCATGGGCTGCGGGGGCTG
GTCATGCAGAAATTGTTCAGCTCCTTCTGGAGACCAACAAAGTGGACATC
AACTCCGTCGATTACCAAAACCGGCCGCCACTGACCTGGGCGCTATTCAA
TTCTCTAGAACGAATGAAACCGGTGGTAAAGCTGCTTCTAGCCACCGGCC
GAGCCGACCTAAACATCCGCGATGAATCATCAGACCGCACAGCGCTTTCA
TGGGTGTGTGGAGGGGGCCACCTGGAAATCGTTAAATGGCTGCTTGAAAC
CGGCAAGGCGGACGTTAACACCATTGAGAAATACCACGGGCGAACTCCTC
TTTCCTGGGCTGCATTTGACAGGCATCAGGAAATCATGAAGGTGTTAATC
GCGACGGGACAGGCGGACCTGGAAGCAAGAGATAGAGAAGAGGGTCGGAC
TGTGCTATCTTGGGCGGCGGGCCATGGACTTGAAGCCGGGGTGAGAGCTT
TGTTAGAAACTGGAAAGGTGGATTTCAATTCCAAAGATCGGAATAGAAGG
ACGCCGCTATTCTGGGCACTAAGCAATGGGCATCAGAATACGGCTCTTCT
TCTAGAGGAGGCTTTGAGCGGATAAGTATACGTATATAGTATCACTTTTG
ACACAGTAGGATATCTCATGACAGGACTTACATCGTTTGACACCACTTTC
TACAATAAAAACCCCAGCAGTCATTACGAG back to topCoding sequence (CDS) from alignment at ch8:4896220..4899049+ >KJC3_012906-T1 ID=KJC3_012906-T1|Name=KJC3_012906-T1|organism=Aspergillus niger KJC3|type=CDS|length=6957bp|location=Sequence derived from alignment at ch8:4896220..4899049+ (Aspergillus niger KJC3)
ATGAGAGAACGCCAACCTCATCGCGAAGACTACACCGTAGGCTGGGTCTG
CGCTCTGCCGATCGAACTAGCAGCCGCACAAGCAATGCTAGACACCGAAC
ACTCCAGCATACGCCTGCAGATCGATGATCCCAGCATATTCATCCTAGGA
AATATAGCCGGGCACAATGTTGTGATTACATGTCTCCCAGATGGACAAAT
AGGCACCAGCTCCGCTGCGACCGTGGCAATCCAAATGCGCTCCGCGTTTC
CGTCAATCAGGTTCGGTCTCATGGTGGGAATCGGCGGGGGCGTCCCCAGC
CCTGAGCATGACATTCGGCTGGGAGATGTGGTCGTCGGTCGACCGGATAA
TCAAACTGGGGGTGTGGTGCAGTATGATTTTGGGAAGAGCACATCGAGTG
GGTTTGTACGCACGGGGTTTTTGAATGCGCCCCCGCTTATCTTGTTGAAT
GCAGTAGCCCTGTTACGGGCGAGGCATTTTCTGGGGAGGGGAACGATGAC
TGAGTATACGGAAAAGTTGAAGGAAATGCCTGCTTTTACGCGCGATAAAT
ATAAAAATAAGGATATCCTGTTCGAGGCGGAGTATAACCATGCTGGAGGT
GTGACGTGTGAGAAATGCGATGAGGAACGATCGATCCAACGCGATGAACG
TGAAGGTCATGGCATTATGGTGCATTATGGAACAATTGCGTCAGGGAATC
AAGTACTCAAGGACGCGCATGAGCGAGACCGACTCGCAGCAGAATTGGGA
GGGGTGTTGTGCTTTGAGATGGAGGCTGCCGGGCTGGTAAATAATTTCCC
ATGCTTGGTAATCCGAGGCATTTGTGACTATGCCGACTCGCATAAGAATA
AGAATTGGCAACCTTCTGCTGCCGGGGTCGCCGCTGCTTATGCGAAGGAG
TTGTTGTCGGTTATACCACCAGGGCATGTGGAGAGAACGAAGCCCATGAG
GAGAAATGCACCCAGAAAAACCTTCATGGTTCCCTTTCAGAGGAATGGAA
ATTTCGCTGGCCGGGATTCTATAATGAGCGAGCTTGATAGAAGATATGAT
ACAGCCGCTTTTGAACATTATCTCGGTATAGCTCTCGTTGGAAATAAAGG
CATAGGTAAAACATACATCGCCCTAGAGTATGCCTACCGAAGCCAACAAC
ACATGCCCTGGCTATCCGTATTCTGGATATACGCCAGCAGCATCTCCCGA
TACAGAAGGTCGTATCAAGATCTAGCTGACCGTCTTGATCTACCCGGAAA
AGACGACCCAGCAGTCGATATTGTGGAACTGGTATCGGACTGGCTCACTG
ATGAAGAAAATGGGCCATGGCTGATGATTCTGGACAATGTGAAAAATGTA
GGTCTTTCCCAAGAGACGGGGCTTCCTGTTCTGCTGGAGGATGACGTGAC
GGAGAAGATTCCGATTTTTTCGTTGTCTCCAGAAGCAAAACATGGCTCTT
TGCTGGTGACGTCGCGCAATTTGGAGGCAGCGATGAGTATCGTCGGTTCA
GCTGAGAACATTGTCCATGTGCAGCAGATGGATGAAGGGCCAAAAAGCTT
ACTTGATAATGGGAAAGATCTGCTGGCGAACCTTAATCTGAACAGCCCCA
AAGATGGTCGGACACCACTATCGTGGGCTGCAGAAGCAGGTATTGTGCCA
GTCGTGAAATTGTTGCTTGCTACTGGTAAAGTGGACGTCGACACCAGAGA
CTCACATTATGGTCGAACGGCTTTATCATGGGCTGCGGGGGCTGGTCATG
CAGAAATTGTTCAGCTCCTTCTGGAGACCAACAAAGTGGACATCAACTCC
GTCGATTACCAAAACCGGCCGCCACTGACCTGGGCGCTATTCAATTCTCT
AGAACGAATGAAACCGGTGGTAAAGCTGCTTCTAGCCACCGGCCGAGCCG
ACCTAAACATCCGCGATGAATCATCAGACCGCACAGCGCTTTCATGGGTG
TGTGGAGGGGGCCACCTGGAAATCGTTAAATGGCTGCTTGAAACCGGCAA
GGCGGACGTTAACACCATTGAGAAATACCACGGGCGAACTCCTCTTTCCT
GGGCTGCATTTGACAGGCATCAGGAAATCATGAAGGTGTTAATCGCGACG
GGACAGGCGGACCTGGAAGCAAGAGATAGAGAAGAGGGTCGGACTGTGCT
ATCTTGGGCGGCGGGCCATGGACTTGAAGCCGGGGTGAGAGCTTTGTTAG
AAACTGGAAAGGTGGATTTCAATTCCAAAGATCGGAATAGAAGGACGCCG
CTATTCTGGGCACTAAGCAATGGGCATCAGAATACGGCTCTTCTTCTAGA
GGAGGCTTTGAGCGGATAAATGAGAGAACGCCAACCTCATCGCGAAGACT
ACACCGTAGGCTGGGTCTGCGCTCTGCCGATCGAACTAGCAGCCGCACAA
GCAATGCTAGACACCGAACACTCCAGCATACGCCTGCAGATCGATGATCC
CAGCATATTCATCCTAGGAAATATAGCCGGGCACAATGTTGTGATTACAT
GTCTCCCAGATGGACAAATAGGCACCAGCTCCGCTGCGACCGTGGCAATC
CAAATGCGCTCCGCGTTTCCGTCAATCAGGTTCGGTCTCATGGTGGGAAT
CGGCGGGGGCGTCCCCAGCCCTGAGCATGACATTCGGCTGGGAGATGTGG
TCGTCGGTCGACCGGATAATCAAACTGGGGGTGTGGTGCAGTATGATTTT
GGGAAGAGCACATCGAGTGGGTTTGTACGCACGGGGTTTTTGAATGCGCC
CCCGCTTATCTTGTTGAATGCAGTAGCCCTGTTACGGGCGAGGCATTTTC
TGGGGAGGGGAACGATGACTGAGTATACGGAAAAGTTGAAGGAAATGCCT
GCTTTTACGCGCGATAAATATAAAAATAAGGATATCCTGTTCGAGGCGGA
GTATAACCATGCTGGAGGTGTGACGTGTGAGAAATGCGATGAGGAACGAT
CGATCCAACGCGATGAACGTGAAGGTCATGGCATTATGGTGCATTATGGA
ACAATTGCGTCAGGGAATCAAGTACTCAAGGACGCGCATGAGCGAGACCG
ACTCGCAGCAGAATTGGGAGGGGTGTTGTGCTTTGAGATGGAGGCTGCCG
GGCTGGTAAATAATTTCCCATGCTTGGTAATCCGAGGCATTTGTGACTAT
GCCGACTCGCATAAGAATAAGAATTGGCAACCTTCTGCTGCCGGGGTCGC
CGCTGCTTATGCGAAGGAGTTGTTGTCGGTTATACCACCAGGGCATGTGG
AGAGAACGAAGCCCATGAGGAGAAATGCACCCAGAAAAACCTTCATGGTT
CCCTTTCAGAGGAATGGAAATTTCGCTGGCCGGGATTCTATAATGAGCGA
GCTTGATAGAAGATATGATACAGCCGCTTTTGAACATTATCTCGGTATAG
CTCTCGTTGGAAATAAAGGCATAGGTAAAACATACATCGCCCTAGAGTAT
GCCTACCGAAGCCAACAACACATGCCCTGGCTATCCGTATTCTGGATATA
CGCCAGCAGCATCTCCCGATACAGAAGGTCGTATCAAGATCTAGCTGACC
GTCTTGATCTACCCGGAAAAGACGACCCAGCAGTCGATATTGTGGAACTG
GTATCGGACTGGCTCACTGATGAAGAAAATGGGCCATGGCTGATGATTCT
GGACAATGTGAAAAATGTAGGTCTTTCCCAAGAGACGGGGCTTCCTGTTC
TGCTGGAGGATGACGTGACGGAGAAGATTCCGATTTTTTCGTTGTCTCCA
GAAGCAAAACATGGCTCTTTGCTGGTGACGTCGCGCAATTTGGAGGCAGC
GATGAGTATCGTCGGTTCAGCTGAGAACATTGTCCATGTGCAGCAGATGG
ATGAAGGGCCAAAAAGCTTACTTGATAATGGGAAAGATCTGCTGGCGAAC
CTTAATCTGAACAGCCCCAAAGATGGTCGGACACCACTATCGTGGGCTGC
AGAAGCAGGTATTGTGCCAGTCGTGAAATTGTTGCTTGCTACTGGTAAAG
TGGACGTCGACACCAGAGACTCACATTATGGTCGAACGGCTTTATCATGG
GCTGCGGGGGCTGGTCATGCAGAAATTGTTCAGCTCCTTCTGGAGACCAA
CAAAGTGGACATCAACTCCGTCGATTACCAAAACCGGCCGCCACTGACCT
GGGCGCTATTCAATTCTCTAGAACGAATGAAACCGGTGGTAAAGCTGCTT
CTAGCCACCGGCCGAGCCGACCTAAACATCCGCGATGAATCATCAGACCG
CACAGCGCTTTCATGGGTGTGTGGAGGGGGCCACCTGGAAATCGTTAAAT
GGCTGCTTGAAACCGGCAAGGCGGACGTTAACACCATTGAGAAATACCAC
GGGCGAACTCCTCTTTCCTGGGCTGCATTTGACAGGCATCAGGAAATCAT
GAAGGTGTTAATCGCGACGGGACAGGCGGACCTGGAAGCAAGAGATAGAG
AAGAGGGTCGGACTGTGCTATCTTGGGCGGCGGGCCATGGACTTGAAGCC
GGGGTGAGAGCTTTGTTAGAAACTGGAAAGGTGGATTTCAATTCCAAAGA
TCGGAATAGAAGGACGCCGCTATTCTGGGCACTAAGCAATGGGCATCAGA
ATACGGCTCTTCTTCTAGAGGAGGCTTTGAGCGGATAAATGAGAGAACGC
CAACCTCATCGCGAAGACTACACCGTAGGCTGGGTCTGCGCTCTGCCGAT
CGAACTAGCAGCCGCACAAGCAATGCTAGACACCGAACACTCCAGCATAC
GCCTGCAGATCGATGATCCCAGCATATTCATCCTAGGAAATATAGCCGGG
CACAATGTTGTGATTACATGTCTCCCAGATGGACAAATAGGCACCAGCTC
CGCTGCGACCGTGGCAATCCAAATGCGCTCCGCGTTTCCGTCAATCAGGT
TCGGTCTCATGGTGGGAATCGGCGGGGGCGTCCCCAGCCCTGAGCATGAC
ATTCGGCTGGGAGATGTGGTCGTCGGTCGACCGGATAATCAAACTGGGGG
TGTGGTGCAGTATGATTTTGGGAAGAGCACATCGAGTGGGTTTGTACGCA
CGGGGTTTTTGAATGCGCCCCCGCTTATCTTGTTGAATGCAGTAGCCCTG
TTACGGGCGAGGCATTTTCTGGGGAGGGGAACGATGACTGAGTATACGGA
AAAGTTGAAGGAAATGCCTGCTTTTACGCGCGATAAATATAAAAATAAGG
ATATCCTGTTCGAGGCGGAGTATAACCATGCTGGAGGTGTGACGTGTGAG
AAATGCGATGAGGAACGATCGATCCAACGCGATGAACGTGAAGGTCATGG
CATTATGGTGCATTATGGAACAATTGCGTCAGGGAATCAAGTACTCAAGG
ACGCGCATGAGCGAGACCGACTCGCAGCAGAATTGGGAGGGGTGTTGTGC
TTTGAGATGGAGGCTGCCGGGCTGGTAAATAATTTCCCATGCTTGGTAAT
CCGAGGCATTTGTGACTATGCCGACTCGCATAAGAATAAGAATTGGCAAC
CTTCTGCTGCCGGGGTCGCCGCTGCTTATGCGAAGGAGTTGTTGTCGGTT
ATACCACCAGGGCATGTGGAGAGAACGAAGCCCATGAGGAGAAATGCACC
CAGAAAAACCTTCATGGTTCCCTTTCAGAGGAATGGAAATTTCGCTGGCC
GGGATTCTATAATGAGCGAGCTTGATAGAAGATATGATACAGCCGCTTTT
GAACATTATCTCGGTATAGCTCTCGTTGGAAATAAAGGCATAGGTAAAAC
ATACATCGCCCTAGAGTATGCCTACCGAAGCCAACAACACATGCCCTGGC
TATCCGTATTCTGGATATACGCCAGCAGCATCTCCCGATACAGAAGGTCG
TATCAAGATCTAGCTGACCGTCTTGATCTACCCGGAAAAGACGACCCAGC
AGTCGATATTGTGGAACTGGTATCGGACTGGCTCACTGATGAAGAAAATG
GGCCATGGCTGATGATTCTGGACAATGTGAAAAATGTAGGTCTTTCCCAA
GAGACGGGGCTTCCTGTTCTGCTGGAGGATGACGTGACGGAGAAGATTCC
GATTTTTTCGTTGTCTCCAGAAGCAAAACATGGCTCTTTGCTGGTGACGT
CGCGCAATTTGGAGGCAGCGATGAGTATCGTCGGTTCAGCTGAGAACATT
GTCCATGTGCAGCAGATGGATGAAGGGCCAAAAAGCTTACTTGATAATGG
GAAAGATCTGCTGGCGAACCTTAATCTGAACAGCCCCAAAGATGGTCGGA
CACCACTATCGTGGGCTGCAGAAGCAGGTATTGTGCCAGTCGTGAAATTG
TTGCTTGCTACTGGTAAAGTGGACGTCGACACCAGAGACTCACATTATGG
TCGAACGGCTTTATCATGGGCTGCGGGGGCTGGTCATGCAGAAATTGTTC
AGCTCCTTCTGGAGACCAACAAAGTGGACATCAACTCCGTCGATTACCAA
AACCGGCCGCCACTGACCTGGGCGCTATTCAATTCTCTAGAACGAATGAA
ACCGGTGGTAAAGCTGCTTCTAGCCACCGGCCGAGCCGACCTAAACATCC
GCGATGAATCATCAGACCGCACAGCGCTTTCATGGGTGTGTGGAGGGGGC
CACCTGGAAATCGTTAAATGGCTGCTTGAAACCGGCAAGGCGGACGTTAA
CACCATTGAGAAATACCACGGGCGAACTCCTCTTTCCTGGGCTGCATTTG
ACAGGCATCAGGAAATCATGAAGGTGTTAATCGCGACGGGACAGGCGGAC
CTGGAAGCAAGAGATAGAGAAGAGGGTCGGACTGTGCTATCTTGGGCGGC
GGGCCATGGACTTGAAGCCGGGGTGAGAGCTTTGTTAGAAACTGGAAAGG
TGGATTTCAATTCCAAAGATCGGAATAGAAGGACGCCGCTATTCTGGGCA
CTAAGCAATGGGCATCAGAATACGGCTCTTCTTCTAGAGGAGGCTTTGAG
CGGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009116 | nucleoside metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012906-T1.utr3p1 | KJC3_012906-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR035994 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR000845 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF01048 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4896220..4899049 + |
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