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KJC3_012908-T1, KJC3_012908-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012908-T1
Unique NameKJC3_012908-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4912657..4915351+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012908-T1 ID=KJC3_012908-T1|Name=KJC3_012908-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2695bp|location=Sequence derived from alignment at ch8:4912657..4915351+ (Aspergillus niger KJC3)
GGGATCTTCGAGAACCACCTCGAATAAGGCCGAGAAACGCCCAGTCGTTT
TGACCCCATGGGGAGGCACACTTATGTACAAAGGTATCGCCTAGTATTTC
TCAAATGCTTCGAGTAGTCTAACCATTACATATTGTGGCAGAGTACTTAG
TGTGCTTCCAGTTCCGACCGGGCAGTCTTCGGAGAAAATTACTCGGGTCC
CAGTCAACCCCGGTCCTGCTGAGCCGTCCGACTTGGCAATTGGGTGTGAG
CCCGTAAAACTTTGCCCGTGCACGTTCCTTCCGAGCGGGGAAGGGCATGG
AAGTTTCTTTGCTAAACGGACTCAGAGTATTGGGGGCGTCGCTCACTTGC
TACTACTCAATCAAGTTAGGCATGTTTGGCCTTGAGGGTTTCCGGGGGTC
CTGTATTTCTAACGACCCGACTTCTGTTAGCTGTTCAAGAACCCTTGACG
TCGAGCCTTTCACGCTCGCTGCGATTAAAAGAACCTTTTCTCCATGGCGT
GGGTTGGATTTGATAGTCGTTCGGCGCGTTGCTTTTCTTATTCACATCAC
CCCATAATAATACAAACCTGATACACCTTGATGCAACCGCGTTTGGGTCC
AGAAGAGAAAGAAAAGACTTGATTGTCGGATACTCTGGGGACTTGTGGGG
TCGAGGAAGTGGGGTCTGGGACATGGAGGCCGGGGATTGGAGAGAGGGAC
AATGGTACGGAGTACAATAATCCGCAGACAACCTTCCCGGCTAAACAGGC
ATTATTATATAGAGGGCATTGGGGTCGTCTGACTATTTTTCTTCCACCCT
GACCACACATAATCCTTTTATCATATTGATTCGACAAACTCGAAATGGGC
GATAATTATGAGGAAAAGCCTGACGCCATTGGCAAAGAGTTCAGCGATGA
ACTCACGCCCGAGGAGCGTGAGCACGAGATCGAGGCACGCGATCTGCAAA
GCAATCAGTATCTCGACAACGAACCATTGTATGACCGGATAGCGTTCGCG
CAGATACCAGTGCACATGAGGAGCCCTCGCATGCTAGTCATCACACTGGG
CGTGTTCGCGGCGTTCAGCGGCATGCTGAGTGGGTTAGACCAGTCGGTGA
TCTCGGGCGCCCTGCCTGGTATCCGCAAGCATTTCATCGCGTCAGGCGAG
TGGGCGAGCATGGACGACCCGAAACTGGCGACCGACATTTCACTGATTTC
GTCACTGATGCCGCTGGGCGCCATGGCCGGCGCGCTCATCATGACGCCGC
TGAACTTCTACTTTGGACGCCGCAACTCGATTATCATCTCGTGTTTGTGG
TACACACTGGGCAGTGGACTTTGTGCGGGCTCCCGTAGTGTGGGGATGCT
GTTTGCGGGCCGCTTCATTCTGGGCATCGGTATCGGAATCGAAGGCGGCT
GTGTCGGTATCTACATCTCCGAGTGTGTGCCGCCAGAGGTGCGTGGCAAC
CTGGTGTCGGTATACCAGCTGATGATCGCATTCGGAGAGATCATCGGATA
CGCCGCCGGCGGCGTATTCTTTGACGTCCCGTCAGGCAGCTGGCGCTGGA
TGCTGGGCTCGTCTCTCTTGTTTTCGACGATCCTCCTGGTTGGGATGGCC
TTCCTGCCAGAATCACCGCGCTGGCTGGCATCCAAGGGCAAGTACGGGCG
CGCGTGGCGGGTGTGGAAGTCGCTGCGCGACATGGCCGACCCCAAAAGCC
TGGACGAGTACCTTGCGATGGAAGTTACAGTCAAACATGATGTCGACCAG
TCCGCGAACGTGAAATGGCATCAGAGGTATCTGGAGGTGTGCAGGACGCC
GCGCAACCGACGGGCGCTTGTATATGCCACGGCTATGATATTTTTCGGGC
AGATGACGGGCATCAATGCGGTCATGTACAATATGTCAAACTTGATGGCC
AAGATGAACTTTGATGACCGCGAGTCAGTGCTGATGTCGATGGTGGGCGG
TGGCGCGTTGTTCCTGGGAACAATTCCTGCTGTGTTCACGATGGACAAGT
TTGGGCGCCGGGTGTGGGCGCAAAACATCCTGATGTTCATCGTGGGTCTG
GCGCTGGTGGGCGTCGGCTACCTATACACGAACAATGGTGTTGATTATTT
CAATGAGCATAAGGCAACGGCCTTGGGGTTGTTTTTCTCCGGTCTGGTGC
TGTACATGGCGTTCTTCGGGGCATATTCGTGCCTGACCTGGGTAGTGCCA
GCGGAGAGCTTTAGTTTCAACACCCGCAGCCAGGGCATGGCGATCTGCTC
TGTATTCCTTTATCTGTGGTCATTCATTGTGACATACAACTTCGAAGGGA
TGCAGAAAGCGATGACCTACACCGGCCTGACAATCGGTTTCTTCGGCGGC
TTGGCCGCGCTAGGCTTCTTTTACCAGCTGTTCTTTATGCCCGAGACCAA
AGACAAAACATTGGAGGAGATCGACGAGTTGTTTCTAATGCCGACAAGTA
AGCTGGTTGCGCTGAACACAAGCAATCTGCTTAAGCCCCTCCGGCGGCGA
CACCGGCCAGAGCCGGTCGATAACTACAACGCCTAAATAGTTGTTCTTGT
CACCTACCAGACCAACGTTCATGGTACCAATAACGAGCGACAAGGTTACT
CAAGTTGAATGTAATGAAATCATGAGGACTAATACATTTCTGCCACTGCA
TAACACATGTTGTGCCTATCAAAGAGGAAGCAACAGCGTAGAGCG
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Coding sequence (CDS) from alignment at ch8:4912657..4915351+

>KJC3_012908-T1 ID=KJC3_012908-T1|Name=KJC3_012908-T1|organism=Aspergillus niger KJC3|type=CDS|length=1692bp|location=Sequence derived from alignment at ch8:4912657..4915351+ (Aspergillus niger KJC3)
ATGGGCGATAATTATGAGGAAAAGCCTGACGCCATTGGCAAAGAGTTCAG
CGATGAACTCACGCCCGAGGAGCGTGAGCACGAGATCGAGGCACGCGATC
TGCAAAGCAATCAGTATCTCGACAACGAACCATTGTATGACCGGATAGCG
TTCGCGCAGATACCAGTGCACATGAGGAGCCCTCGCATGCTAGTCATCAC
ACTGGGCGTGTTCGCGGCGTTCAGCGGCATGCTGAGTGGGTTAGACCAGT
CGGTGATCTCGGGCGCCCTGCCTGGTATCCGCAAGCATTTCATCGCGTCA
GGCGAGTGGGCGAGCATGGACGACCCGAAACTGGCGACCGACATTTCACT
GATTTCGTCACTGATGCCGCTGGGCGCCATGGCCGGCGCGCTCATCATGA
CGCCGCTGAACTTCTACTTTGGACGCCGCAACTCGATTATCATCTCGTGT
TTGTGGTACACACTGGGCAGTGGACTTTGTGCGGGCTCCCGTAGTGTGGG
GATGCTGTTTGCGGGCCGCTTCATTCTGGGCATCGGTATCGGAATCGAAG
GCGGCTGTGTCGGTATCTACATCTCCGAGTGTGTGCCGCCAGAGGTGCGT
GGCAACCTGGTGTCGGTATACCAGCTGATGATCGCATTCGGAGAGATCAT
CGGATACGCCGCCGGCGGCGTATTCTTTGACGTCCCGTCAGGCAGCTGGC
GCTGGATGCTGGGCTCGTCTCTCTTGTTTTCGACGATCCTCCTGGTTGGG
ATGGCCTTCCTGCCAGAATCACCGCGCTGGCTGGCATCCAAGGGCAAGTA
CGGGCGCGCGTGGCGGGTGTGGAAGTCGCTGCGCGACATGGCCGACCCCA
AAAGCCTGGACGAGTACCTTGCGATGGAAGTTACAGTCAAACATGATGTC
GACCAGTCCGCGAACGTGAAATGGCATCAGAGGTATCTGGAGGTGTGCAG
GACGCCGCGCAACCGACGGGCGCTTGTATATGCCACGGCTATGATATTTT
TCGGGCAGATGACGGGCATCAATGCGGTCATGTACAATATGTCAAACTTG
ATGGCCAAGATGAACTTTGATGACCGCGAGTCAGTGCTGATGTCGATGGT
GGGCGGTGGCGCGTTGTTCCTGGGAACAATTCCTGCTGTGTTCACGATGG
ACAAGTTTGGGCGCCGGGTGTGGGCGCAAAACATCCTGATGTTCATCGTG
GGTCTGGCGCTGGTGGGCGTCGGCTACCTATACACGAACAATGGTGTTGA
TTATTTCAATGAGCATAAGGCAACGGCCTTGGGGTTGTTTTTCTCCGGTC
TGGTGCTGTACATGGCGTTCTTCGGGGCATATTCGTGCCTGACCTGGGTA
GTGCCAGCGGAGAGCTTTAGTTTCAACACCCGCAGCCAGGGCATGGCGAT
CTGCTCTGTATTCCTTTATCTGTGGTCATTCATTGTGACATACAACTTCG
AAGGGATGCAGAAAGCGATGACCTACACCGGCCTGACAATCGGTTTCTTC
GGCGGCTTGGCCGCGCTAGGCTTCTTTTACCAGCTGTTCTTTATGCCCGA
GACCAAAGACAAAACATTGGAGGAGATCGACGAGTTGTTTCTAATGCCGA
CAAGTAAGCTGGTTGCGCTGAACACAAGCAATCTGCTTAAGCCCCTCCGG
CGGCGACACCGGCCAGAGCCGGTCGATAACTACAACGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012908KJC3_012908Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012908-T1KJC3_012908-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012908-T1.utr5p1KJC3_012908-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012908-T1.utr5p2KJC3_012908-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012908-T1.utr5p3KJC3_012908-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012908-T1.exon1KJC3_012908-T1.exon1Aspergillus niger KJC3exon
KJC3_012908-T1.exon2KJC3_012908-T1.exon2Aspergillus niger KJC3exon
KJC3_012908-T1.exon3KJC3_012908-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012908-T1.cdsKJC3_012908-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012908-T1.utr3p1KJC3_012908-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4912657..4915351 +
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