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KJC3_012920-T2, KJC3_012920-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012920-T2
Unique NameKJC3_012920-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4954841..4956993+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012920-T2 ID=KJC3_012920-T2|Name=KJC3_012920-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2153bp|location=Sequence derived from alignment at ch8:4954841..4956993+ (Aspergillus niger KJC3)
CCACGCTCTCTTTGTCTGTCTCCTTTCTTAGCCGCATCTCCCACACCCGG
TTTGATGTTCACCTCTGGGCCGACATGCGTTCCTACTTTGCCTGGTAAGC
AGAACACCACCCGTTTCAGCCAAGAGTTATCGTCATAATCCCCACTTCAA
TTCCAGTGAGACGTGTAGACAACGCAAGGTCAAATGCAATGAAGAAAGGC
CTGTCTGCGGGCCGTGTGCCAAAGCCTCTCGTGATTGTGTCTTCTCAAAC
TGCATTTTCCGTTACTATAGCGCCGCCGATTTTTGCAATCGCGCGGGGGA
CCATTCTAGTCGTGAAAGAGTACCGACGTGGGTCAAAGTACCGTCTGATC
GTAAGCCGGCCCCCTCATAATCCCTGCGAGGGCGGCGTGAATTTGAGGGG
TAGCGAGAGTTGACATTGTGACAGTCACCTTTGTCCAGGTCAGAGATCCT
TTCGCCGACGAGGAACTGACAAACGTCCCAGATGATAATCATCTGGTAAC
CCCTCCTTCAACAGTACCAACTGTTGAGGATGCGATCCCGAGTTCTACTA
GCAGCACTGCACCGCCGGAAAAGGATGGGGCCTTGACGGCAGTGTTACTG
CAGCATTTCAAAGAATGCCCCAGTCAATGGTAATGCGCTCTCCCTTTGGG
ACGTGAGTTCCGCTGGGAAAAGAAAATTCACTTGACGGTTTGCATAGGTT
GGACTGCTTTGACTCCGATGCTTATTACTCTGCAAAGATACCCGTCATGG
TGGCTACTCAGCCAATGCTGAAAGCCGCCACTTGCGCTCTCGCAGCAAAG
CATCTACACCGAATATGCCGGGGAGATCCAACCCGGATCTTACAGCTTCC
CCACATGCGTAACAGCCCATTGCAGTGGACTATCAGAGAAATGGACTGCA
GATATGAATCAGTGCGCTTCTATGACCAGACGATTCATTATTTAAAAGCA
GCAATTTTGTTGGAAATCCCTGACAATCAGCGCGAGGAAATATTTGCAGT
TGTTGCTATTCTCTGTATGTATGAGTTGATTGATGCCCCCAGTACTGAAT
GGCGGGCCCATCTAAGTGCCCTGCCCTTTCTATACTGTGGGACTCCAGGG
GAATTGAGCAAGAGCCCAACATCTGCTCTACCTAATTCCCTGATGCACAT
CTCTCGCTCCGTATTCTGGAGTCTCGTCCGGCAGGATTGTCTCTCAGCGT
GTAGGTTTCTCATCATCAGCTATTCTTCCGTTTGCCGCTGCCCGATCTCA
TTCAACCCGGGAACAGTTATCAACGAAACCCAGACTCGCCTTAACCTCTC
TGATCTTGTTCTCTGGCGCAACTTCGGCCTCATTATCTCCTCCTCCGGCC
ATTTTTTACCCCCATCTGCCTCTCCGGCTATGGCCTCTCCCTCTCCAAGC
CCTCTCGCCTTTCCTCTCCCCCTTCCTCCCCCGGCGCACACCTGGCTCTG
TGAAGACATGCTCAGCAACGCCCTAATCTGGATCATTAGTAAGATTATCA
ATTTCATTACCAGCGGCGACGGGATTACTCCGGGCGACTTTGAAAATCCC
CGGGGCCAACGTCCGTGCTTCGGCACCACGCAGGAGGAGCTCCTGGCACG
GTGGAAGCGTCTCGACATTGAGCTCCGTGCCTGGTATGACACTGTACCCC
GCTCGTTCACCCCCTGCGCGCGTAGCCGACTTTTTCTCTCCAATGCCGTG
CCGATCCCGCGCACCGCATCCGCTCCTGCGGCCGCAAACGTCGCCACAAA
CACCACCTCTACGGATACCATCGACGCCATCATCTTCACCGTCCCTATGT
GCGCCGTTACCATGCAAACCTACCACATGGCGCGCGTTCTGTTGTTGACT
AACATGCCACAAGAATCAACGGCAATCCGGTCAACAGCACGATTGCGCTC
CTATCGTCGGATCGCGGAATTGGCAGTGCGTCACGCGCGTGAGATTTGCG
GTATTAGTCTGGGCGGGTTACCCGACGCAATCCTCCCGCACACGGTGCAG
CCGTTATTTGTAGCAGGGCAGTGCTTCGAGCAGGACTCGGAGCGGCAGTT
GGTAGTCGATCTGTTGCAGCAGGTGGAATGCGATTCCGGGTGGGCAACTA
AATATAGGATTCAGGATTTGCAGCGGCAATGGGCGGAGACACGGGTTGGA
TAA
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Coding sequence (CDS) from alignment at ch8:4954841..4956993+

>KJC3_012920-T2 ID=KJC3_012920-T2|Name=KJC3_012920-T2|organism=Aspergillus niger KJC3|type=CDS|length=2682bp|location=Sequence derived from alignment at ch8:4954841..4956993+ (Aspergillus niger KJC3)
ATGGTGGCTACTCAGCCAATGCTGAAAGCCGCCACTTGCGCTCTCGCAGC
AAAGCATCTACACCGAATATGCCGGGGAGATCCAACCCGGATCTTACAGC
TTCCCCACATGCGTAACAGCCCATTGCAGTGGACTATCAGAGAAATGGAC
TGCAGATATGAATCAGTGCGCTTCTATGACCAGACGATTCATTATTTAAA
AGCAGCAATTTTGTTGGAAATCCCTGACAATCAGCGCGAGGAAATATTTG
CAGTTGTTGCTATTCTCTGTATGTATGAGTTGATTGATGCCCCCAGTACT
GAATGGCGGGCCCATCTAAGTGCCCTGCCCTTTCTATACTGTGGGACTCC
AGGGGAATTGAGCAAGAGCCCAACATCTGCTCTACCTAATTCCCTGATGC
ACATCTCTCGCTCCGTATTCTGGAGTCTCGTCCGGCAGGATTGTCTCTCA
GCGTTTATCAACGAAACCCAGACTCGCCTTAACCTCTCTGATCTTGTTCT
CTGGCGCAACTTCGGCCTCATTATCTCCTCCTCCGGCCATTTTTTACCCC
CATCTGCCTCTCCGGCTATGGCCTCTCCCTCTCCAAGCCCTCTCGCCTTT
CCTCTCCCCCTTCCTCCCCCGGCGCACACCTGGCTCTGTGAAGACATGCT
CAGCAACGCCCTAATCTGGATCATTAGTAAGATTATCAATTTCATTACCA
GCGGCGACGGGATTACTCCGGGCGACTTTGAAAATCCCCGGGGCCAACGT
CCGTGCTTCGGCACCACGCAGGAGGAGCTCCTGGCACGGTGGAAGCGTCT
CGACATTGAGCTCCGTGCCTGGTATGACACTGTACCCCGCTCGTTCACCC
CCTGCGCGCGTAGCCGACTTTTTCTCTCCAATGCCGTGCCGATCCCGCGC
ACCGCATCCGCTCCTGCGGCCGCAAACGTCGCCACAAACACCACCTCTAC
GGATACCATCGACGCCATCATCTTCACCGTCCCTATGTGCGCCGTTACCA
TGCAAACCTACCACATGGCGCGCGTTCTGTTGTTGACTAACATGCCACAA
GAATCAACGGCAATCCGGTCAACAGCACGATTGCGCTCCTATCGTCGGAT
CGCGGAATTGGCAGTGCGTCACGCGCGTGAGATTTGCGGTATTAGTCTGG
GCGGGTTACCCGACGCAATCCTCCCGCACACGGTGCAGCCGTTATTTGTA
GCAGGGCAGTGCTTCGAGCAGGACTCGGAGCGGCAGTTGGTAGTCGATCT
GTTGCAGCAGGTGGAATGCGATTCCGGGTGGGCAACTAAATATAGGATTC
AGGATTTGCAGCGGCAATGGGCGGAGACACGGGTTGGATAAATGGTGGCT
ACTCAGCCAATGCTGAAAGCCGCCACTTGCGCTCTCGCAGCAAAGCATCT
ACACCGAATATGCCGGGGAGATCCAACCCGGATCTTACAGCTTCCCCACA
TGCGTAACAGCCCATTGCAGTGGACTATCAGAGAAATGGACTGCAGATAT
GAATCAGTGCGCTTCTATGACCAGACGATTCATTATTTAAAAGCAGCAAT
TTTGTTGGAAATCCCTGACAATCAGCGCGAGGAAATATTTGCAGTTGTTG
CTATTCTCTGTATGTATGAGTTGATTGATGCCCCCAGTACTGAATGGCGG
GCCCATCTAAGTGCCCTGCCCTTTCTATACTGTGGGACTCCAGGGGAATT
GAGCAAGAGCCCAACATCTGCTCTACCTAATTCCCTGATGCACATCTCTC
GCTCCGTATTCTGGAGTCTCGTCCGGCAGGATTGTCTCTCAGCGTTTATC
AACGAAACCCAGACTCGCCTTAACCTCTCTGATCTTGTTCTCTGGCGCAA
CTTCGGCCTCATTATCTCCTCCTCCGGCCATTTTTTACCCCCATCTGCCT
CTCCGGCTATGGCCTCTCCCTCTCCAAGCCCTCTCGCCTTTCCTCTCCCC
CTTCCTCCCCCGGCGCACACCTGGCTCTGTGAAGACATGCTCAGCAACGC
CCTAATCTGGATCATTAGTAAGATTATCAATTTCATTACCAGCGGCGACG
GGATTACTCCGGGCGACTTTGAAAATCCCCGGGGCCAACGTCCGTGCTTC
GGCACCACGCAGGAGGAGCTCCTGGCACGGTGGAAGCGTCTCGACATTGA
GCTCCGTGCCTGGTATGACACTGTACCCCGCTCGTTCACCCCCTGCGCGC
GTAGCCGACTTTTTCTCTCCAATGCCGTGCCGATCCCGCGCACCGCATCC
GCTCCTGCGGCCGCAAACGTCGCCACAAACACCACCTCTACGGATACCAT
CGACGCCATCATCTTCACCGTCCCTATGTGCGCCGTTACCATGCAAACCT
ACCACATGGCGCGCGTTCTGTTGTTGACTAACATGCCACAAGAATCAACG
GCAATCCGGTCAACAGCACGATTGCGCTCCTATCGTCGGATCGCGGAATT
GGCAGTGCGTCACGCGCGTGAGATTTGCGGTATTAGTCTGGGCGGGTTAC
CCGACGCAATCCTCCCGCACACGGTGCAGCCGTTATTTGTAGCAGGGCAG
TGCTTCGAGCAGGACTCGGAGCGGCAGTTGGTAGTCGATCTGTTGCAGCA
GGTGGAATGCGATTCCGGGTGGGCAACTAAATATAGGATTCAGGATTTGC
AGCGGCAATGGGCGGAGACACGGGTTGGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012920KJC3_012920Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012920-T2.utr5p1KJC3_012920-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012920-T2.exon1KJC3_012920-T2.exon1Aspergillus niger KJC3exon
KJC3_012920-T2.exon2KJC3_012920-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012920-T2.cdsKJC3_012920-T2.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012920-T2KJC3_012920-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4954841..4956993 +
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