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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4979291..4980804+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012927-T1 ID=KJC3_012927-T1|Name=KJC3_012927-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1514bp|location=Sequence derived from alignment at ch8:4979291..4980804+ (Aspergillus niger KJC3)
ATGTCGTCGACAGTCGCTGCCGAATCATCGATGGAGATGATTCGACGCGT
TTATACAAATTCTTGGTTTCAGATCCTTCTAATCAGCTTTATTTGTTTCT
GCTGCCCTGGTGTAAGACATCTCTTTATTACTATGCGTGGCTTGGCACGA
TGTGAACAATATACTAATCAAATCAATTGCTGTAGATGTACAATGCCCTC
TCCGGCTTGGGAGGATCCGGTCAGGTCGACCCAACTGTAGCAGCCAATGC
TACAGTTGCCCTAATGTCTGCTACTGCCGGAACCGCTCTGTTCGTCGTGG
GACCAATATTTGAGCGGGTAGGGCCTCGTGTTTGCCTTCTCCTTGGCGGA
TGGACATATGCCCTGTATTCGGGTAGCTTGCTGAATTTCAACTGTAAGTT
CTTGTTAGCGAGACAAAGAAACGGGGACATGATTGACCAAACGCAATTCT
AAGATGACAAAAATGGAGCGTTTGTCATTGCGTCCGGTGCTCTCCTGGGT
GTAGGCGCCTCGTTCTTATGGGTATCCCAGGGTGCAATTATGACAACCTA
CGTTCCCGAATCTCAGAAGGGGCGAGCAATCGCCGTGTTTTGGATCATTT
TCAACCTCGGCGGCGGAGTTGGCTCTCTCGCTAGCTTTGGCCTCAACTTC
CACTCCAAGACCAGCACTATATCGGATGCAACGTACATTGCTCTGCTTGT
GATTATGCTGGTCGGGTGGGTGCTGGGACTTTTGATATGCACTCCATCAG
CGGTACGAGTGAAAGGGATACATACAACTGCAAGTGAGAAACCCAACTGG
CGACAGACAGCACGACTTGCATTACGCACAGTATCTGACTGGAGGGTTAT
CTGCATGTTGCCTTTGTTCTTCTCCGCGCACGTGCCCTATTCATATCAGC
AAAACGAGGTGAATGGTATGAACTTCAACATTCGAACTCGATCCTTGAAT
GGTGCACTATACTGGATGGCTCAGATGCTAGGTGGCTTGATCATGGGCTG
CTTGCTCGATATGCCATGGCTGACCCGCCGATGGCGTGCTGTGGCGGGCT
GGGTAACCCTGTTTGTAACTGGGATGGCTATCTGGGGCGGTGGCTACAAA
TTTCAGCTGTGGTCTACTCATCGTATAGCACAAGGACTGAAACAAAACAT
TGACTATACGAATGGAAGTCTCTCAGCCGGCCCCATCATCTTGTATATCT
GCTACGGAGCATATGATGCCCTTTGGCAATCTTTTTGTTACTGGTTGATT
GGTGCCCAGTCTAATTCTCCTGCTAGAACTGCTATAATGGTTGGTGCTTA
TAAGACCTTTCAGTCTACTGGAGGTGCCATGGCGTGGAGATTGAATGCCT
TGAGAAAGACGGCCATGACTCAGTTTGCTATGGACTGGGGACTTTGCATC
GGTTCGCTACTGATTGTCATTCCTACCGTCTGGGCCATTACCTCAACAAG
TGTTGGCGAGGAAGACGTTGTTGCCGAAGTGGCGGAGAAGGATGTGAAGC
AACCGTTACCGTGA back to topCoding sequence (CDS) from alignment at ch8:4979291..4980804+ >KJC3_012927-T1 ID=KJC3_012927-T1|Name=KJC3_012927-T1|organism=Aspergillus niger KJC3|type=CDS|length=4140bp|location=Sequence derived from alignment at ch8:4979291..4980804+ (Aspergillus niger KJC3)
ATGTCGTCGACAGTCGCTGCCGAATCATCGATGGAGATGATTCGACGCGT
TTATACAAATTCTTGGTTTCAGATCCTTCTAATCAGCTTTATTTGTTTCT
GCTGCCCTGGTATGTACAATGCCCTCTCCGGCTTGGGAGGATCCGGTCAG
GTCGACCCAACTGTAGCAGCCAATGCTACAGTTGCCCTAATGTCTGCTAC
TGCCGGAACCGCTCTGTTCGTCGTGGGACCAATATTTGAGCGGGTAGGGC
CTCGTGTTTGCCTTCTCCTTGGCGGATGGACATATGCCCTGTATTCGGGT
AGCTTGCTGAATTTCAACTATGACAAAAATGGAGCGTTTGTCATTGCGTC
CGGTGCTCTCCTGGGTGTAGGCGCCTCGTTCTTATGGGTATCCCAGGGTG
CAATTATGACAACCTACGTTCCCGAATCTCAGAAGGGGCGAGCAATCGCC
GTGTTTTGGATCATTTTCAACCTCGGCGGCGGAGTTGGCTCTCTCGCTAG
CTTTGGCCTCAACTTCCACTCCAAGACCAGCACTATATCGGATGCAACGT
ACATTGCTCTGCTTGTGATTATGCTGGTCGGGTGGGTGCTGGGACTTTTG
ATATGCACTCCATCAGCGGTACGAGTGAAAGGGATACATACAACTGCAAG
TGAGAAACCCAACTGGCGACAGACAGCACGACTTGCATTACGCACAGTAT
CTGACTGGAGGGTTATCTGCATGTTGCCTTTGTTCTTCTCCGCGCACGTG
CCCTATTCATATCAGCAAAACGAGGTGAATGGTATGAACTTCAACATTCG
AACTCGATCCTTGAATGGTGCACTATACTGGATGGCTCAGATGCTAGGTG
GCTTGATCATGGGCTGCTTGCTCGATATGCCATGGCTGACCCGCCGATGG
CGTGCTGTGGCGGGCTGGGTAACCCTGTTTGTAACTGGGATGGCTATCTG
GGGCGGTGGCTACAAATTTCAGCTGTGGTCTACTCATCGTATAGCACAAG
GACTGAAACAAAACATTGACTATACGAATGGAAGTCTCTCAGCCGGCCCC
ATCATCTTGTATATCTGCTACGGAGCATATGATGCCCTTTGGCAATCTTT
TTGTTACTGGTTGATTGGTGCCCAGTCTAATTCTCCTGCTAGAACTGCTA
TAATGGTTGGTGCTTATAAGACCTTTCAGTCTACTGGAGGTGCCATGGCG
TGGAGATTGAATGCCTTGAGAAAGACGGCCATGACTCAGTTTGCTATGGA
CTGGGGACTTTGCATCGGTTCGCTACTGATTGTCATTCCTACCGTCTGGG
CCATTACCTCAACAAGTGTTGGCGAGGAAGACGTTGTTGCCGAAGTGGCG
GAGAAGGATGTGAAGCAACCGTTACCGTGAATGTCGTCGACAGTCGCTGC
CGAATCATCGATGGAGATGATTCGACGCGTTTATACAAATTCTTGGTTTC
AGATCCTTCTAATCAGCTTTATTTGTTTCTGCTGCCCTGGTATGTACAAT
GCCCTCTCCGGCTTGGGAGGATCCGGTCAGGTCGACCCAACTGTAGCAGC
CAATGCTACAGTTGCCCTAATGTCTGCTACTGCCGGAACCGCTCTGTTCG
TCGTGGGACCAATATTTGAGCGGGTAGGGCCTCGTGTTTGCCTTCTCCTT
GGCGGATGGACATATGCCCTGTATTCGGGTAGCTTGCTGAATTTCAACTA
TGACAAAAATGGAGCGTTTGTCATTGCGTCCGGTGCTCTCCTGGGTGTAG
GCGCCTCGTTCTTATGGGTATCCCAGGGTGCAATTATGACAACCTACGTT
CCCGAATCTCAGAAGGGGCGAGCAATCGCCGTGTTTTGGATCATTTTCAA
CCTCGGCGGCGGAGTTGGCTCTCTCGCTAGCTTTGGCCTCAACTTCCACT
CCAAGACCAGCACTATATCGGATGCAACGTACATTGCTCTGCTTGTGATT
ATGCTGGTCGGGTGGGTGCTGGGACTTTTGATATGCACTCCATCAGCGGT
ACGAGTGAAAGGGATACATACAACTGCAAGTGAGAAACCCAACTGGCGAC
AGACAGCACGACTTGCATTACGCACAGTATCTGACTGGAGGGTTATCTGC
ATGTTGCCTTTGTTCTTCTCCGCGCACGTGCCCTATTCATATCAGCAAAA
CGAGGTGAATGGTATGAACTTCAACATTCGAACTCGATCCTTGAATGGTG
CACTATACTGGATGGCTCAGATGCTAGGTGGCTTGATCATGGGCTGCTTG
CTCGATATGCCATGGCTGACCCGCCGATGGCGTGCTGTGGCGGGCTGGGT
AACCCTGTTTGTAACTGGGATGGCTATCTGGGGCGGTGGCTACAAATTTC
AGCTGTGGTCTACTCATCGTATAGCACAAGGACTGAAACAAAACATTGAC
TATACGAATGGAAGTCTCTCAGCCGGCCCCATCATCTTGTATATCTGCTA
CGGAGCATATGATGCCCTTTGGCAATCTTTTTGTTACTGGTTGATTGGTG
CCCAGTCTAATTCTCCTGCTAGAACTGCTATAATGGTTGGTGCTTATAAG
ACCTTTCAGTCTACTGGAGGTGCCATGGCGTGGAGATTGAATGCCTTGAG
AAAGACGGCCATGACTCAGTTTGCTATGGACTGGGGACTTTGCATCGGTT
CGCTACTGATTGTCATTCCTACCGTCTGGGCCATTACCTCAACAAGTGTT
GGCGAGGAAGACGTTGTTGCCGAAGTGGCGGAGAAGGATGTGAAGCAACC
GTTACCGTGAATGTCGTCGACAGTCGCTGCCGAATCATCGATGGAGATGA
TTCGACGCGTTTATACAAATTCTTGGTTTCAGATCCTTCTAATCAGCTTT
ATTTGTTTCTGCTGCCCTGGTATGTACAATGCCCTCTCCGGCTTGGGAGG
ATCCGGTCAGGTCGACCCAACTGTAGCAGCCAATGCTACAGTTGCCCTAA
TGTCTGCTACTGCCGGAACCGCTCTGTTCGTCGTGGGACCAATATTTGAG
CGGGTAGGGCCTCGTGTTTGCCTTCTCCTTGGCGGATGGACATATGCCCT
GTATTCGGGTAGCTTGCTGAATTTCAACTATGACAAAAATGGAGCGTTTG
TCATTGCGTCCGGTGCTCTCCTGGGTGTAGGCGCCTCGTTCTTATGGGTA
TCCCAGGGTGCAATTATGACAACCTACGTTCCCGAATCTCAGAAGGGGCG
AGCAATCGCCGTGTTTTGGATCATTTTCAACCTCGGCGGCGGAGTTGGCT
CTCTCGCTAGCTTTGGCCTCAACTTCCACTCCAAGACCAGCACTATATCG
GATGCAACGTACATTGCTCTGCTTGTGATTATGCTGGTCGGGTGGGTGCT
GGGACTTTTGATATGCACTCCATCAGCGGTACGAGTGAAAGGGATACATA
CAACTGCAAGTGAGAAACCCAACTGGCGACAGACAGCACGACTTGCATTA
CGCACAGTATCTGACTGGAGGGTTATCTGCATGTTGCCTTTGTTCTTCTC
CGCGCACGTGCCCTATTCATATCAGCAAAACGAGGTGAATGGTATGAACT
TCAACATTCGAACTCGATCCTTGAATGGTGCACTATACTGGATGGCTCAG
ATGCTAGGTGGCTTGATCATGGGCTGCTTGCTCGATATGCCATGGCTGAC
CCGCCGATGGCGTGCTGTGGCGGGCTGGGTAACCCTGTTTGTAACTGGGA
TGGCTATCTGGGGCGGTGGCTACAAATTTCAGCTGTGGTCTACTCATCGT
ATAGCACAAGGACTGAAACAAAACATTGACTATACGAATGGAAGTCTCTC
AGCCGGCCCCATCATCTTGTATATCTGCTACGGAGCATATGATGCCCTTT
GGCAATCTTTTTGTTACTGGTTGATTGGTGCCCAGTCTAATTCTCCTGCT
AGAACTGCTATAATGGTTGGTGCTTATAAGACCTTTCAGTCTACTGGAGG
TGCCATGGCGTGGAGATTGAATGCCTTGAGAAAGACGGCCATGACTCAGT
TTGCTATGGACTGGGGACTTTGCATCGGTTCGCTACTGATTGTCATTCCT
ACCGTCTGGGCCATTACCTCAACAAGTGTTGGCGAGGAAGACGTTGTTGC
CGAAGTGGCGGAGAAGGATGTGAAGCAACCGTTACCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF05978 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4979291..4980804 + |
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