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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4979291..4980804+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012927-T1 ID=KJC3_012927-T1|Name=KJC3_012927-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1514bp|location=Sequence derived from alignment at ch8:4979291..4980804+ (Aspergillus niger KJC3) ATGTCGTCGACAGTCGCTGCCGAATCATCGATGGAGATGATTCGACGCGT
TTATACAAATTCTTGGTTTCAGATCCTTCTAATCAGCTTTATTTGTTTCT
GCTGCCCTGGTGTAAGACATCTCTTTATTACTATGCGTGGCTTGGCACGA
TGTGAACAATATACTAATCAAATCAATTGCTGTAGATGTACAATGCCCTC
TCCGGCTTGGGAGGATCCGGTCAGGTCGACCCAACTGTAGCAGCCAATGC
TACAGTTGCCCTAATGTCTGCTACTGCCGGAACCGCTCTGTTCGTCGTGG
GACCAATATTTGAGCGGGTAGGGCCTCGTGTTTGCCTTCTCCTTGGCGGA
TGGACATATGCCCTGTATTCGGGTAGCTTGCTGAATTTCAACTGTAAGTT
CTTGTTAGCGAGACAAAGAAACGGGGACATGATTGACCAAACGCAATTCT
AAGATGACAAAAATGGAGCGTTTGTCATTGCGTCCGGTGCTCTCCTGGGT
GTAGGCGCCTCGTTCTTATGGGTATCCCAGGGTGCAATTATGACAACCTA
CGTTCCCGAATCTCAGAAGGGGCGAGCAATCGCCGTGTTTTGGATCATTT
TCAACCTCGGCGGCGGAGTTGGCTCTCTCGCTAGCTTTGGCCTCAACTTC
CACTCCAAGACCAGCACTATATCGGATGCAACGTACATTGCTCTGCTTGT
GATTATGCTGGTCGGGTGGGTGCTGGGACTTTTGATATGCACTCCATCAG
CGGTACGAGTGAAAGGGATACATACAACTGCAAGTGAGAAACCCAACTGG
CGACAGACAGCACGACTTGCATTACGCACAGTATCTGACTGGAGGGTTAT
CTGCATGTTGCCTTTGTTCTTCTCCGCGCACGTGCCCTATTCATATCAGC
AAAACGAGGTGAATGGTATGAACTTCAACATTCGAACTCGATCCTTGAAT
GGTGCACTATACTGGATGGCTCAGATGCTAGGTGGCTTGATCATGGGCTG
CTTGCTCGATATGCCATGGCTGACCCGCCGATGGCGTGCTGTGGCGGGCT
GGGTAACCCTGTTTGTAACTGGGATGGCTATCTGGGGCGGTGGCTACAAA
TTTCAGCTGTGGTCTACTCATCGTATAGCACAAGGACTGAAACAAAACAT
TGACTATACGAATGGAAGTCTCTCAGCCGGCCCCATCATCTTGTATATCT
GCTACGGAGCATATGATGCCCTTTGGCAATCTTTTTGTTACTGGTTGATT
GGTGCCCAGTCTAATTCTCCTGCTAGAACTGCTATAATGGTTGGTGCTTA
TAAGACCTTTCAGTCTACTGGAGGTGCCATGGCGTGGAGATTGAATGCCT
TGAGAAAGACGGCCATGACTCAGTTTGCTATGGACTGGGGACTTTGCATC
GGTTCGCTACTGATTGTCATTCCTACCGTCTGGGCCATTACCTCAACAAG
TGTTGGCGAGGAAGACGTTGTTGCCGAAGTGGCGGAGAAGGATGTGAAGC
AACCGTTACCGTGA back to topCoding sequence (CDS) from alignment at ch8:4979291..4980804+ >KJC3_012927-T1 ID=KJC3_012927-T1|Name=KJC3_012927-T1|organism=Aspergillus niger KJC3|type=CDS|length=4140bp|location=Sequence derived from alignment at ch8:4979291..4980804+ (Aspergillus niger KJC3) ATGTCGTCGACAGTCGCTGCCGAATCATCGATGGAGATGATTCGACGCGT TTATACAAATTCTTGGTTTCAGATCCTTCTAATCAGCTTTATTTGTTTCT GCTGCCCTGGTATGTACAATGCCCTCTCCGGCTTGGGAGGATCCGGTCAG GTCGACCCAACTGTAGCAGCCAATGCTACAGTTGCCCTAATGTCTGCTAC TGCCGGAACCGCTCTGTTCGTCGTGGGACCAATATTTGAGCGGGTAGGGC CTCGTGTTTGCCTTCTCCTTGGCGGATGGACATATGCCCTGTATTCGGGT AGCTTGCTGAATTTCAACTATGACAAAAATGGAGCGTTTGTCATTGCGTC CGGTGCTCTCCTGGGTGTAGGCGCCTCGTTCTTATGGGTATCCCAGGGTG CAATTATGACAACCTACGTTCCCGAATCTCAGAAGGGGCGAGCAATCGCC GTGTTTTGGATCATTTTCAACCTCGGCGGCGGAGTTGGCTCTCTCGCTAG CTTTGGCCTCAACTTCCACTCCAAGACCAGCACTATATCGGATGCAACGT ACATTGCTCTGCTTGTGATTATGCTGGTCGGGTGGGTGCTGGGACTTTTG ATATGCACTCCATCAGCGGTACGAGTGAAAGGGATACATACAACTGCAAG TGAGAAACCCAACTGGCGACAGACAGCACGACTTGCATTACGCACAGTAT CTGACTGGAGGGTTATCTGCATGTTGCCTTTGTTCTTCTCCGCGCACGTG CCCTATTCATATCAGCAAAACGAGGTGAATGGTATGAACTTCAACATTCG AACTCGATCCTTGAATGGTGCACTATACTGGATGGCTCAGATGCTAGGTG GCTTGATCATGGGCTGCTTGCTCGATATGCCATGGCTGACCCGCCGATGG CGTGCTGTGGCGGGCTGGGTAACCCTGTTTGTAACTGGGATGGCTATCTG GGGCGGTGGCTACAAATTTCAGCTGTGGTCTACTCATCGTATAGCACAAG GACTGAAACAAAACATTGACTATACGAATGGAAGTCTCTCAGCCGGCCCC ATCATCTTGTATATCTGCTACGGAGCATATGATGCCCTTTGGCAATCTTT TTGTTACTGGTTGATTGGTGCCCAGTCTAATTCTCCTGCTAGAACTGCTA TAATGGTTGGTGCTTATAAGACCTTTCAGTCTACTGGAGGTGCCATGGCG TGGAGATTGAATGCCTTGAGAAAGACGGCCATGACTCAGTTTGCTATGGA CTGGGGACTTTGCATCGGTTCGCTACTGATTGTCATTCCTACCGTCTGGG CCATTACCTCAACAAGTGTTGGCGAGGAAGACGTTGTTGCCGAAGTGGCG GAGAAGGATGTGAAGCAACCGTTACCGTGAATGTCGTCGACAGTCGCTGC CGAATCATCGATGGAGATGATTCGACGCGTTTATACAAATTCTTGGTTTC AGATCCTTCTAATCAGCTTTATTTGTTTCTGCTGCCCTGGTATGTACAAT GCCCTCTCCGGCTTGGGAGGATCCGGTCAGGTCGACCCAACTGTAGCAGC CAATGCTACAGTTGCCCTAATGTCTGCTACTGCCGGAACCGCTCTGTTCG TCGTGGGACCAATATTTGAGCGGGTAGGGCCTCGTGTTTGCCTTCTCCTT GGCGGATGGACATATGCCCTGTATTCGGGTAGCTTGCTGAATTTCAACTA TGACAAAAATGGAGCGTTTGTCATTGCGTCCGGTGCTCTCCTGGGTGTAG GCGCCTCGTTCTTATGGGTATCCCAGGGTGCAATTATGACAACCTACGTT CCCGAATCTCAGAAGGGGCGAGCAATCGCCGTGTTTTGGATCATTTTCAA CCTCGGCGGCGGAGTTGGCTCTCTCGCTAGCTTTGGCCTCAACTTCCACT CCAAGACCAGCACTATATCGGATGCAACGTACATTGCTCTGCTTGTGATT ATGCTGGTCGGGTGGGTGCTGGGACTTTTGATATGCACTCCATCAGCGGT ACGAGTGAAAGGGATACATACAACTGCAAGTGAGAAACCCAACTGGCGAC AGACAGCACGACTTGCATTACGCACAGTATCTGACTGGAGGGTTATCTGC ATGTTGCCTTTGTTCTTCTCCGCGCACGTGCCCTATTCATATCAGCAAAA CGAGGTGAATGGTATGAACTTCAACATTCGAACTCGATCCTTGAATGGTG CACTATACTGGATGGCTCAGATGCTAGGTGGCTTGATCATGGGCTGCTTG CTCGATATGCCATGGCTGACCCGCCGATGGCGTGCTGTGGCGGGCTGGGT AACCCTGTTTGTAACTGGGATGGCTATCTGGGGCGGTGGCTACAAATTTC AGCTGTGGTCTACTCATCGTATAGCACAAGGACTGAAACAAAACATTGAC TATACGAATGGAAGTCTCTCAGCCGGCCCCATCATCTTGTATATCTGCTA CGGAGCATATGATGCCCTTTGGCAATCTTTTTGTTACTGGTTGATTGGTG CCCAGTCTAATTCTCCTGCTAGAACTGCTATAATGGTTGGTGCTTATAAG ACCTTTCAGTCTACTGGAGGTGCCATGGCGTGGAGATTGAATGCCTTGAG AAAGACGGCCATGACTCAGTTTGCTATGGACTGGGGACTTTGCATCGGTT CGCTACTGATTGTCATTCCTACCGTCTGGGCCATTACCTCAACAAGTGTT GGCGAGGAAGACGTTGTTGCCGAAGTGGCGGAGAAGGATGTGAAGCAACC GTTACCGTGAATGTCGTCGACAGTCGCTGCCGAATCATCGATGGAGATGA TTCGACGCGTTTATACAAATTCTTGGTTTCAGATCCTTCTAATCAGCTTT ATTTGTTTCTGCTGCCCTGGTATGTACAATGCCCTCTCCGGCTTGGGAGG ATCCGGTCAGGTCGACCCAACTGTAGCAGCCAATGCTACAGTTGCCCTAA TGTCTGCTACTGCCGGAACCGCTCTGTTCGTCGTGGGACCAATATTTGAG CGGGTAGGGCCTCGTGTTTGCCTTCTCCTTGGCGGATGGACATATGCCCT GTATTCGGGTAGCTTGCTGAATTTCAACTATGACAAAAATGGAGCGTTTG TCATTGCGTCCGGTGCTCTCCTGGGTGTAGGCGCCTCGTTCTTATGGGTA TCCCAGGGTGCAATTATGACAACCTACGTTCCCGAATCTCAGAAGGGGCG AGCAATCGCCGTGTTTTGGATCATTTTCAACCTCGGCGGCGGAGTTGGCT CTCTCGCTAGCTTTGGCCTCAACTTCCACTCCAAGACCAGCACTATATCG GATGCAACGTACATTGCTCTGCTTGTGATTATGCTGGTCGGGTGGGTGCT GGGACTTTTGATATGCACTCCATCAGCGGTACGAGTGAAAGGGATACATA CAACTGCAAGTGAGAAACCCAACTGGCGACAGACAGCACGACTTGCATTA CGCACAGTATCTGACTGGAGGGTTATCTGCATGTTGCCTTTGTTCTTCTC CGCGCACGTGCCCTATTCATATCAGCAAAACGAGGTGAATGGTATGAACT TCAACATTCGAACTCGATCCTTGAATGGTGCACTATACTGGATGGCTCAG ATGCTAGGTGGCTTGATCATGGGCTGCTTGCTCGATATGCCATGGCTGAC CCGCCGATGGCGTGCTGTGGCGGGCTGGGTAACCCTGTTTGTAACTGGGA TGGCTATCTGGGGCGGTGGCTACAAATTTCAGCTGTGGTCTACTCATCGT ATAGCACAAGGACTGAAACAAAACATTGACTATACGAATGGAAGTCTCTC AGCCGGCCCCATCATCTTGTATATCTGCTACGGAGCATATGATGCCCTTT GGCAATCTTTTTGTTACTGGTTGATTGGTGCCCAGTCTAATTCTCCTGCT AGAACTGCTATAATGGTTGGTGCTTATAAGACCTTTCAGTCTACTGGAGG TGCCATGGCGTGGAGATTGAATGCCTTGAGAAAGACGGCCATGACTCAGT TTGCTATGGACTGGGGACTTTGCATCGGTTCGCTACTGATTGTCATTCCT ACCGTCTGGGCCATTACCTCAACAAGTGTTGGCGAGGAAGACGTTGTTGC CGAAGTGGCGGAGAAGGATGTGAAGCAACCGTTACCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF05978 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:4979291..4980804 + |
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