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KJC3_012944-T1, KJC3_012944-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012944-T1
Unique NameKJC3_012944-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:5025828..5027556+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012944-T1 ID=KJC3_012944-T1|Name=KJC3_012944-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1729bp|location=Sequence derived from alignment at ch8:5025828..5027556+ (Aspergillus niger KJC3)
GCAAGTCAAGCACACGCGCTGACTGCAATTTTGATATTCGGAATGCAGAA
ATCAGTATCTTTTTCCTGTCCAGGATGCGACAGAGAAGGGTTCCGCAGTT
TGGTGGAGGCTCAGAAGCACTTTGAGAAGCAATCTCACTCTGTGCGGTGT
ACCGTCTGCCAAAAGGCGTTCGGCAGTGGCATGGCAGTCATACAGCATTA
TCAAAAGCACGTCAAAGCTCGGGAAGCTCCAACCAATACGAAAAAGCCCA
TTCAGGAGAGAAAGGCTTGTAACCAGTATTCAGCAGGTCCGACAATAACA
TCGCCATCACCCCTCGGAAATGGCCAAATGTACTTTCAAGAAACTCTACT
GACAGCTGTCGGGAATATAATGCATTTCGGAGAGGAGCGTGATCCGATCA
ACTTGCCCTTTCAATTGCCTTTGATCGCACCTGGTGTAACTGATGCTAAT
GGTAACAACCCTCTCAATCTTTGCTCCCTTTTGCAGTCGCCCATGCGACT
AAGTGATCTACATAAAGACTTACTTGGTATCCGGGAAACTCTTGGCTAGG
AATCGATTTCAACACATACACCCACAACGTCGTTCTGCATCCTCTTGAAC
AGTGTCTAATTCTGAGGTATCTGCGTTCCAAGTGCCATTCGGAGAGCCGC
CTTCGGAGAGAAGGATACATCCTAGGGCCAGTCACAGTAAGGAATAAAGA
CCTCCCACGGAAGGGATCCATTCCCACTTATCAATTTCGCGAAACGCCGT
CTGCGGAACAGCATGGACTCAAGAGACATGCCATCGCACTCGATTGTGAG
ATGATCGGTGTCAAAGACAATCGGCAAACTCTCGCGTTCATAAGTGCCAT
TGACTTTTTGACAGGCGAAGTTCTCATTAGCCGCTACGTAGCACCATCCG
AGGAGGTCATTGACTGGAGATCAAAAATTACCGGAATAACCCAAGATGTT
ATGACAAGCGCCACGATATCTGGCGCTGCATTCAGAGATTGGCGAGAAGC
GCGCGAGAATTTATGGCAATTTGCCGATTCATCCACTGTTTTCGTCGGCC
AATCTCTTAATTATGACCTTGAGGTTCTGGGAATCTGTCACAACAAAATT
GTTGACTCCGCCATTTTGACTGCGGAGGCGGTATTCCCAGCCACTGGCCC
CACGGAGAGTTTACCTCGCGCTTGGAGCTTGAAGGCCGTGGCCAAATCTC
TTTTGGATTTGGAGATTCAGAGCGGAGATCGTGCGCACAGTGCTTTGGAA
GACACATATGCGGTACGCGACGTGATCATATTCTGCATCAGAAATCCGGA
ACAGTTAAAGTCATGGGCAGAGCTTCGACAGACAGAAGAGGGACAAAAGG
GCAAAAAAAGCCGGCGCAAGAGCAAGGCCAAACGACATCCGACCACGTCG
TCTACTCAAGATATCCAGCATAAAACTCGGGTGTTAAAAAATGAGTTTGA
ATACGATATTGATGACGATGACGAATTTTGCTTGTCTGAGTATGCTAGGA
ATGCTGGCTGGCCAGACGGGTGGGATCCCTGGTCTGATTGATTCAACTTC
CTTTCAAATGTCCAAACAGAACACGAAAATTTGGTATCCTATCAGAGAAG
GGAGGCAGCTTTCTATACATCCTACCATTTGAAAAAGAATGGAACGTGAT
CTGAAAATTGTGAACGCAGGTCTGTCCGTCAGCCCCTATCTAGCCAGGTA
GCAGATGTAATATATCGTTCCATCACGTA
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Coding sequence (CDS) from alignment at ch8:5025828..5027556+

>KJC3_012944-T1 ID=KJC3_012944-T1|Name=KJC3_012944-T1|organism=Aspergillus niger KJC3|type=CDS|length=2802bp|location=Sequence derived from alignment at ch8:5025828..5027556+ (Aspergillus niger KJC3)
ATGCAGAAATCAGTATCTTTTTCCTGTCCAGGATGCGACAGAGAAGGGTT
CCGCAGTTTGGTGGAGGCTCAGAAGCACTTTGAGAAGCAATCTCACTCTG
TGCGGTGTACCGTCTGCCAAAAGGCGTTCGGCAGTGGCATGGCAGTCATA
CAGCATTATCAAAAGCACGTCAAAGCTCGGGAAGCTCCAACCAATACGAA
AAAGCCCATTCAGGAGAGAAAGGCTTGTAACCAGTATTCAGCAGGTCCGA
CAATAACATCGCCATCACCCCTCGGAAATGGCCAAATGTACTTTCAAGAA
ACTCTACTGACAGCTGTCGGGAATATAATGCATTTCGGAGAGGAGCGTGA
TCCGATCAACTTGCCCTTTCAATTGCCTTTGATCGCACCTGGTGTAACTG
ATGCTAATGGAATCGATTTCAACACATACACCCACAACGTCGTTCTGCAT
CCTCTTGAACAGTGTCTAATTCTGAGGTATCTGCGTTCCAAGTGCCATTC
GGAGAGCCGCCTTCGGAGAGAAGGATACATCCTAGGGCCAGTCACAGTAA
GGAATAAAGACCTCCCACGGAAGGGATCCATTCCCACTTATCAATTTCGC
GAAACGCCGTCTGCGGAACAGCATGGACTCAAGAGACATGCCATCGCACT
CGATTGTGAGATGATCGGTGTCAAAGACAATCGGCAAACTCTCGCGTTCA
TAAGTGCCATTGACTTTTTGACAGGCGAAGTTCTCATTAGCCGCTACGTA
GCACCATCCGAGGAGGTCATTGACTGGAGATCAAAAATTACCGGAATAAC
CCAAGATGTTATGACAAGCGCCACGATATCTGGCGCTGCATTCAGAGATT
GGCGAGAAGCGCGCGAGAATTTATGGCAATTTGCCGATTCATCCACTGTT
TTCGTCGGCCAATCTCTTAATTATGACCTTGAGGTTCTGGGAATCTGTCA
CAACAAAATTGTTGACTCCGCCATTTTGACTGCGGAGGCGGTATTCCCAG
CCACTGGCCCCACGGAGAGTTTACCTCGCGCTTGGAGCTTGAAGGCCGTG
GCCAAATCTCTTTTGGATTTGGAGATTCAGAGCGGAGATCGTGCGCACAG
TGCTTTGGAAGACACATATGCGGTACGCGACGTGATCATATTCTGCATCA
GAAATCCGGAACAGTTAAAGTCATGGGCAGAGCTTCGACAGACAGAAGAG
GGACAAAAGGGCAAAAAAAGCCGGCGCAAGAGCAAGGCCAAACGACATCC
GACCACGTCGTCTACTCAAGATATCCAGCATAAAACTCGGGTGTTAAAAA
ATGAGTTTGAATACGATATTGATGACGATGACGAATTTTGCTTGTCTGAG
TATGCTAGGAATGCTGGCTGGCCAGACGGGTGGGATCCCTGGTCTGATTG
AATGCAGAAATCAGTATCTTTTTCCTGTCCAGGATGCGACAGAGAAGGGT
TCCGCAGTTTGGTGGAGGCTCAGAAGCACTTTGAGAAGCAATCTCACTCT
GTGCGGTGTACCGTCTGCCAAAAGGCGTTCGGCAGTGGCATGGCAGTCAT
ACAGCATTATCAAAAGCACGTCAAAGCTCGGGAAGCTCCAACCAATACGA
AAAAGCCCATTCAGGAGAGAAAGGCTTGTAACCAGTATTCAGCAGGTCCG
ACAATAACATCGCCATCACCCCTCGGAAATGGCCAAATGTACTTTCAAGA
AACTCTACTGACAGCTGTCGGGAATATAATGCATTTCGGAGAGGAGCGTG
ATCCGATCAACTTGCCCTTTCAATTGCCTTTGATCGCACCTGGTGTAACT
GATGCTAATGGAATCGATTTCAACACATACACCCACAACGTCGTTCTGCA
TCCTCTTGAACAGTGTCTAATTCTGAGGTATCTGCGTTCCAAGTGCCATT
CGGAGAGCCGCCTTCGGAGAGAAGGATACATCCTAGGGCCAGTCACAGTA
AGGAATAAAGACCTCCCACGGAAGGGATCCATTCCCACTTATCAATTTCG
CGAAACGCCGTCTGCGGAACAGCATGGACTCAAGAGACATGCCATCGCAC
TCGATTGTGAGATGATCGGTGTCAAAGACAATCGGCAAACTCTCGCGTTC
ATAAGTGCCATTGACTTTTTGACAGGCGAAGTTCTCATTAGCCGCTACGT
AGCACCATCCGAGGAGGTCATTGACTGGAGATCAAAAATTACCGGAATAA
CCCAAGATGTTATGACAAGCGCCACGATATCTGGCGCTGCATTCAGAGAT
TGGCGAGAAGCGCGCGAGAATTTATGGCAATTTGCCGATTCATCCACTGT
TTTCGTCGGCCAATCTCTTAATTATGACCTTGAGGTTCTGGGAATCTGTC
ACAACAAAATTGTTGACTCCGCCATTTTGACTGCGGAGGCGGTATTCCCA
GCCACTGGCCCCACGGAGAGTTTACCTCGCGCTTGGAGCTTGAAGGCCGT
GGCCAAATCTCTTTTGGATTTGGAGATTCAGAGCGGAGATCGTGCGCACA
GTGCTTTGGAAGACACATATGCGGTACGCGACGTGATCATATTCTGCATC
AGAAATCCGGAACAGTTAAAGTCATGGGCAGAGCTTCGACAGACAGAAGA
GGGACAAAAGGGCAAAAAAAGCCGGCGCAAGAGCAAGGCCAAACGACATC
CGACCACGTCGTCTACTCAAGATATCCAGCATAAAACTCGGGTGTTAAAA
AATGAGTTTGAATACGATATTGATGACGATGACGAATTTTGCTTGTCTGA
GTATGCTAGGAATGCTGGCTGGCCAGACGGGTGGGATCCCTGGTCTGATT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012944KJC3_012944Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012944-T1.utr5p1KJC3_012944-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012944-T1.exon1KJC3_012944-T1.exon1Aspergillus niger KJC3exon
KJC3_012944-T1.exon2KJC3_012944-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012944-T1.cdsKJC3_012944-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012944-T1.utr3p1KJC3_012944-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012944-T1KJC3_012944-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR013520
DBxrefPFAM:PF00929
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:5025828..5027556 +
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