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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC12F:42688..43898+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012946-T1 ID=KJC3_012946-T1|Name=KJC3_012946-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1211bp|location=Sequence derived from alignment at JC12F:42688..43898+ (Aspergillus niger KJC3)
CCGGGGCAAACCCAAATGGTAAATCATGACACCGTATGTCATTGATCAAC
GGTCAGGTGCACAATGTCCTCGGTACGATATTGATACTGTAGTTACGGTA
TGGCAACTGGAAGCACGGTATCCCTCTCCTGCTACATATGCATTCATAAT
AGGATATTCCAAGAAATACCCTTTATAAAAGGCCTGGCGGGTGGCCTTTA
TATAGTGTTCTCCGTCACTTCGCTTCGAACATCTCATGAATCTTGCGTAC
CGTTAGTGCTCTCAAGAACTCTATTCTGGCATCTCTTCCAAGCGATTCAT
CCACCGCGATCGGTCCTATAGCGCATCAGCTAGCCACGCGGAATGATACA
TACTGGCTGTCAATTTGTTGTGGGAAGAAGAGCATGTCCCTGATGGCGCA
TCATTCCCCGACGCCTATTCTGCAGCCCACTCCGCTCCCGGAGCTCACTT
CCAGTCTCCTGTCAGACGACACCGACTCTACATCGAACTCCTCAGCCTCT
GTGATGCAGTGCCCATGTTGCGCCTCGCCCGTTATTCCAGATCTAGCCAC
GTTGGCCGAGACCATCCCAGACCGGGAACTCAATATGACCACCACGCTTG
AAGACCAGTTCCTGAACACACTGAGGATCCAGCCAGGGGCCGAATCCACG
GCTGAAGCGGTGGCAATCGTACCCCAAGACTGGCAGGCCACAGGGAACTG
GTCGTTAATCAGCTTGCTTTGCCACCGAGCTTTCAACGCCTTCCGAAGCC
AGGCAGCCATTCGAAATTTCGGTATATACTACTATGGAGACTTCGGCCCT
GGGGACACCTTGACTGCTGTTTCTCGAAAGGTAGTGCGGGGACGATTGAC
ATGGCTGGAGGCAACAGTGACCCGAGATAGTGTGTTGGTGGCCATCGCAA
CCGCCTTGTACGACGATCTTTAGTCCAGGCTCATGGACAATACGCAGTGT
CAGAGAATCGGGGATATGACGATTGGGTTTTGCAATCTGACTGAACTTGT
CTCCGAGGTGGCCTGATTCGTAGTTGCGGAAAACCGCAGTGCATGCGGGT
CTCTCCAGCAGTTAAGTACCTAGGGTCGGCACCGCACCTATTCTAGCTAA
TATGCTGCGCATCCTTGGTGGAGCCAGCCTCTTCTGTCTCCTTTCTTTTT
GGCCTTGGGGTATTCCAGCTATGCTATGTCATATAGATAGATACACAACG
TTACACTGTCC back to topCoding sequence (CDS) from alignment at JC12F:42688..43898+ >KJC3_012946-T1 ID=KJC3_012946-T1|Name=KJC3_012946-T1|organism=Aspergillus niger KJC3|type=CDS|length=540bp|location=Sequence derived from alignment at JC12F:42688..43898+ (Aspergillus niger KJC3)
ATGTCCCTGATGGCGCATCATTCCCCGACGCCTATTCTGCAGCCCACTCC
GCTCCCGGAGCTCACTTCCAGTCTCCTGTCAGACGACACCGACTCTACAT
CGAACTCCTCAGCCTCTGTGATGCAGTGCCCATGTTGCGCCTCGCCCGTT
ATTCCAGATCTAGCCACGTTGGCCGAGACCATCCCAGACCGGGAACTCAA
TATGACCACCACGCTTGAAGACCAGTTCCTGAACACACTGAGGATCCAGC
CAGGGGCCGAATCCACGGCTGAAGCGGTGGCAATCGTACCCCAAGACTGG
CAGGCCACAGGGAACTGGTCGTTAATCAGCTTGCTTTGCCACCGAGCTTT
CAACGCCTTCCGAAGCCAGGCAGCCATTCGAAATTTCGGTATATACTACT
ATGGAGACTTCGGCCCTGGGGACACCTTGACTGCTGTTTCTCGAAAGGTA
GTGCGGGGACGATTGACATGGCTGGAGGCAACAGTGACCCGAGATAGTGT
GTTGGTGGCCATCGCAACCGCCTTGTACGACGATCTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012946-T1.utr5p1 | KJC3_012946-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012946-T1.utr3p1 | KJC3_012946-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC12F | supercontig | JC12F:42688..43898 + |
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