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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC12F:44113..46333- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012947-T2 ID=KJC3_012947-T2|Name=KJC3_012947-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2221bp|location=Sequence derived from alignment at JC12F:44113..46333- (Aspergillus niger KJC3)
ATCTGGGTTTGGCCAACTGCTAACTGCATGCCAGCTGCCACAGCACAGCG
TTCGGTCCTTGAGTTTGGTTTCCACCAGATTATATGCCGCCCTGTTCCCG
CGGCTTCATCGAACCATCACCTTCCGTGCGAGGAATGAATGGGCTTTGAA
CATTCTCGATGTCCATCCCTTTTTTCGGGACCACTCCGGCTCCCGCGCCG
GCGAAATCCTCCAGCATGCCCGGCAGATAAGGTTCAGCGCTCCTATTCAC
ATTGCTAGGTTCCACCGTTGTGTATACAACAGTCACTTTCTCCTACCGGC
CTCGTCCCACAACCGACCTACACTTGGAAGCCCGCACGAGTCGACAGCCC
ATCAAGCCTTTCTCAATGATTTGTCTTATCAGATAGATCAGGTCTTTGCG
GGACTGGAGACCGTCTCCATCCGCTCGTTTCAGTATGTATGAAAGGCATG
AGCCGCTGGACTTGCAACTGACCTGTCGCATGTGGTGCGTAGGGACCTGC
CTTCCAGCCGGAATTCTGGACACCAACGGATACCTGGTCCGCCACCAGCA
ACGGATCCATTCGCTTTGCTTGATCACCGACGGCACCTGTCCTCATGCCG
GCCGTCGTCTAGAGGGCCTGTCGAGTTTGACGGCACTGACTGACCTGGAA
TGGGAAGGCATCCAGCATCCATTCGAAATGCGCACCTTGTGCGAGTGTCT
CCGACAAAATCATCGGCGGCTGAAGGCGGTATCCATTGGACTTCTGTTGG
ATCCGAACGTACCCACATCCCATGAGGATATTCTGGAGGTCTTCTGGCCA
CCTCGAGCGCAGGACGACTGCACGCCGGGCGAGCGGGAATGGTTCCCATC
TCTCACATCCTTGACATTCTCTCGCGTCCCGTTCCCCGACAGTCTGCTGC
CGGGCGGCCAACCGTCACCGTTCCGCGCGCTCAAGGCACTAACGATCCGA
GACTGTCCCAACGAGCAGCGCTTCCTGCAGCTGTTGGCGCGAGCCAAGGA
TCCGTTGACCCTCCAGCACTTCGAGATCTGCAGTGACTACCTGCGCGATT
CAGAGGACCGATTGGCGTCCATTGCGATCGTCGAATTTCTACTCTCATTT
CGTGGCTTGCGACGGCTGTACCTGAAGGTGGCCAACTTTCCCCGGTTCCT
GCCGGGTCTTGGTGATGCCATCAAACATCACCAAGCCACGCTCCACGGTC
TGGTTTTTCACGAGCGTCGGCTGATGCCAATCGACGCTGAAAGGCTGTTT
GAAGATCTTCGGGATGTGAATATGGCATCCCCCAATATTCCGCAAATTCT
ACGACATAGTTCCCCCGCCGCTCTTGGCCTCTGTCTTCGCCCGGCCAGCG
CGGTAAGTGTATCGTTAGCACCCATCCCCACGGCTATATGAGCTGACTCA
CTGTAGCGCGGTCTTCTCTCAGACATCCCGGAACGCTCGACAATAAGATT
ACTCCACCTCCGGTTAAGCGGAGAGGAGAGGAACCATCGGCATCTCCGCA
GAGAGATCGTCTCAGAGCTGCGGAGAAATGCGGAAGGGAGGCTATGGTCC
AGGTCGAGACATGGACCAACAGTCGCGGGCCTCCACCTCAAGCCCGCTCG
GAAACGGTCGGAAGCCCAAGATTTCCTCCTGCTTGCTCAGTGGGCTTTTT
TTGGACCTACGGGGCTTCCTGCCTTGCAGATACTCGCCTTCGGTGACTTT
TCGCACGATGGCCGCTATAGAGAACAACAGATCTTGATCCGGCGGAGGAG
GATCGGTGAGCAGCCTTACCCGAGAGTTTCATCGGACGGGGAATACAGCA
TAAGCTCATCGTTTTGCCTGGTCGATAGCGACGACCATTCTCTCTGGGAC
GGCCTGCCATTGGATGGGACTCAGTTTCTGTCTGCATGTCCTGGCACGGG
GTTGATGGAGTCCCCCTACGACCTTTAGCATGGTATCTTTGGAGTTCCTT
ATATTTGGCGTTTTCAGATTCGCGCGTTGCAAGGGCGGCAATCTGTTGTA
GATTGCGCTTTTGATATAATCGCCGCCGAAACATGCCTTTGGCAGTTGTT
ACTTACTAGTTGTGCGCCGACAGCGCCATTGTGGGAGGCTAGGGGGCGCG
ATCCTGCTTGCTTTATCTCTCGCCGCCTGCTGCCTGGGCTGGGAAGGCTT
CCAGCACTGCTAACGGTTGGCTATACTGGGATTTTCCGTAACAGTAGGCT
CTCCTTTCTAGGGACGCAGAC back to topCoding sequence (CDS) from alignment at JC12F:44113..46333- >KJC3_012947-T2 ID=KJC3_012947-T2|Name=KJC3_012947-T2|organism=Aspergillus niger KJC3|type=CDS|length=1884bp|location=Sequence derived from alignment at JC12F:44113..46333- (Aspergillus niger KJC3)
ACATCCCGGAACGCTCGACAATAAATGTATGAAAGGCATGAGCCGCTGGA
CTTGCAACTGACCTGTCGCATGTGGTGCGTAGGGACCTGCCTTCCAGCCG
GAATTCTGGACACCAACGGATACCTGGTCCGCCACCAGCAACGGATCCAT
TCGCTTTGCTTGATCACCGACGGCACCTGTCCTCATGCCGGCCGTCGTCT
AGAGGGCCTGTCGAGTTTGACGGCACTGACTGACCTGGAATGGGAAGGCA
TCCAGCATCCATTCGAAATGCGCACCTTGTGCGAGTGTCTCCGACAAAAT
CATCGGCGGCTGAAGGCGGTATCCATTGGACTTCTGTTGGATCCGAACGT
ACCCACATCCCATGAGGATATTCTGGAGGTCTTCTGGCCACCTCGAGCGC
AGGACGACTGCACGCCGGGCGAGCGGGAATGGTTCCCATCTCTCACATCC
TTGACATTCTCTCGCGTCCCGTTCCCCGACAGTCTGCTGCCGGGCGGCCA
ACCGTCACCGTTCCGCGCGCTCAAGGCACTAACGATCCGAGACTGTCCCA
ACGAGCAGCGCTTCCTGCAGCTGTTGGCGCGAGCCAAGGATCCGTTGACC
CTCCAGCACTTCGAGATCTGCAGTGACTACCTGCGCGATTCAGAGGACCG
ATTGGCGTCCATTGCGATCGTCGAATTTCTACTCTCATTTCGTGGCTTGC
GACGGCTGTACCTGAAGGTGGCCAACTTTCCCCGGTTCCTGCCGGGTCTT
GGTGATGCCATCAAACATCACCAAGCCACGCTCCACGGTCTGGTTTTTCA
CGAGCGTCGGCTGATGCCAATCGACGCTGAAAGGCTGTTTGAAGATCTTC
GGGATGTGAATATGGCATCCCCCAATATTCCGCAAATTCTACGACATAGT
TCCCCCGCCGCTCTTGGCCTCTGTCTTCGCCCGGCCAGCGCGACATCCCG
GAACGCTCGACAATAAATGTATGAAAGGCATGAGCCGCTGGACTTGCAAC
TGACCTGTCGCATGTGGTGCGTAGGGACCTGCCTTCCAGCCGGAATTCTG
GACACCAACGGATACCTGGTCCGCCACCAGCAACGGATCCATTCGCTTTG
CTTGATCACCGACGGCACCTGTCCTCATGCCGGCCGTCGTCTAGAGGGCC
TGTCGAGTTTGACGGCACTGACTGACCTGGAATGGGAAGGCATCCAGCAT
CCATTCGAAATGCGCACCTTGTGCGAGTGTCTCCGACAAAATCATCGGCG
GCTGAAGGCGGTATCCATTGGACTTCTGTTGGATCCGAACGTACCCACAT
CCCATGAGGATATTCTGGAGGTCTTCTGGCCACCTCGAGCGCAGGACGAC
TGCACGCCGGGCGAGCGGGAATGGTTCCCATCTCTCACATCCTTGACATT
CTCTCGCGTCCCGTTCCCCGACAGTCTGCTGCCGGGCGGCCAACCGTCAC
CGTTCCGCGCGCTCAAGGCACTAACGATCCGAGACTGTCCCAACGAGCAG
CGCTTCCTGCAGCTGTTGGCGCGAGCCAAGGATCCGTTGACCCTCCAGCA
CTTCGAGATCTGCAGTGACTACCTGCGCGATTCAGAGGACCGATTGGCGT
CCATTGCGATCGTCGAATTTCTACTCTCATTTCGTGGCTTGCGACGGCTG
TACCTGAAGGTGGCCAACTTTCCCCGGTTCCTGCCGGGTCTTGGTGATGC
CATCAAACATCACCAAGCCACGCTCCACGGTCTGGTTTTTCACGAGCGTC
GGCTGATGCCAATCGACGCTGAAAGGCTGTTTGAAGATCTTCGGGATGTG
AATATGGCATCCCCCAATATTCCGCAAATTCTACGACATAGTTCCCCCGC
CGCTCTTGGCCTCTGTCTTCGCCCGGCCAGCGCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012947-T2.utr5p1 | KJC3_012947-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC12F | supercontig | JC12F:44113..46333 - |
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