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KJC3_012954-T1, KJC3_012954-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012954-T1
Unique NameKJC3_012954-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC12F:212510..214206+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012954-T1 ID=KJC3_012954-T1|Name=KJC3_012954-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1697bp|location=Sequence derived from alignment at JC12F:212510..214206+ (Aspergillus niger KJC3)
CGTAAGCGGCAAGCGAGTCGGCCACGTAAGCGAGTCGGCCACCCCATCGA
AACTCGTCCACGCCTCCGAAAGCGATGCTATCCAAACAGCCATTACACCA
CCAAAAATGCCTAAATCATCAAAAGAGCTCGTGGAACAAGAGGGCAGGCT
CTGTTTAGCAGTTGAATCTATTCAGAAAGGTCATACAAAGTCTATTCGTG
AAGCTGCACGTGTTTTTCAAGTTCCCCGATCAACACTTCAAGATCGCCTA
AATGGACTCAAATTTCGCAAGGATACTAGAGCCAACTCACATAAATTGAC
CTCTATAGAGGAAGAATCACTTGAAAAATGGATTATATCGCTAGATCAAC
GTGGTGCACCACCAAAGCACTCTCAAGTCCGTGAAATGGCGAATCTACTA
CTTCAAAAGCGTGGTCAAAATACAACTATCTCTGTCGGACAAAAATGGGT
TACCAACTACATCTCAAGGCATGATTCCTTGAAAAGTCGATATAGCCGTC
AAATCAACTACAAACGAGCGAAGTGTGAAGAACCTGAAGCTATTCAGATG
TGGTTTAAACGCGTACAAACTGCTATATCAACATACGGCATTGTCGATGA
AGATATCTACAACTTTGATGAAACTGGCTTTGCTATGGGTATCCTGGGTA
CTACTAAAGTAGTAACACGCTCAACATGTCAAGGAAGACCCTTTCTTATA
CAGCCAGGGAATCGCGAATGGATAACTTCAATTGAGTGTATCAATGCTGC
TGGATGGGTGCTACCAGCATATTTAGTGTTGAAAGCAAAAACACATATTC
AAGCGTGGTACGAAGGAAGTCTACCATCTTCCTGGAGGATTGCTATATCC
TCAAACGGATGGACTACACGAGAGATTGGTGAAGCATGGCTCAAAGATCA
TTTCATTCCGTATATCAAAACACGAAGAACAGGTCAATATAGCCTCCTCG
TACTTGACGGGCATGATTCACATCTAACACCTCAATTTGATGACATATGT
TATCAAAATCAGATTATACCTGTCTGTATGCCTGCTAATTCCTCACATCT
ATGTCAGCCTTTAGATGTTGCATGCTTTCCACCTTTGAAGAAGGCCTACA
AAGATCAAGTTCAACAGCTTATCCGTACGGGATATCATCATATCGAGAAG
GTTGATTTTCTTGACATGTATCCGAAAGCCCATGCTCAAGCATTTACTAA
AGCAAATATACAAAGCGCTTTTAGAGCTTCAGGTCTTGTTCCTCTAGATC
CCAGCAAGATATTAGAGAATATGATCTTCAAGGAAACCAGCCGTCCGAGC
AGTCAAAGCACCTCCTCTTCTTCGATCTTTACAAAAACACCAAGAAATTC
GAGGCAATTCAAGAAGTACGAGTCTACACTATCTCAATTACTTCAACAAC
AAGATACACCAGCTACACCAATACAGTCAGCCTTATCGTACATCTTCAAA
GGCGCGGAGGTTGCTTTGAATCATACAATACTACTTGAGCATGAAAATCG
CCAACTACGTGAAGCTCTTGACAAACGAAACACCAAGCAGAAACGCAATC
AACATCAAATGGATGGTTTGAATGGCCTCACTGTACAAGAAGCACTCGAG
GCTTTCAACCATGCTAGAATACTGGAAGAACAAGCTGGGGATACAGGCCC
TAGAGAGGATCAACCACGCCGTCGGGCGCCTCCTAGGTGTAGCGCGT
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Coding sequence (CDS) from alignment at JC12F:212510..214206+

>KJC3_012954-T1 ID=KJC3_012954-T1|Name=KJC3_012954-T1|organism=Aspergillus niger KJC3|type=CDS|length=2853bp|location=Sequence derived from alignment at JC12F:212510..214206+ (Aspergillus niger KJC3)
ATGCCTAAATCATCAAAAGAGCTCGTGGAACAAGAGGGCAGGCTCTGTTT
AGCAGTTGAATCTATTCAGAAAGGTCATACAAAGTCTATTCGTGAAGCTG
CACGTGTTTTTCAAGTTCCCCGATCAACACTTCAAGATCGCCTAAATGGA
CTCAAATTTCGCAAGGATACTAGAGCCAACTCACATAAATTGACCTCTAT
AGAGGAAGAATCACTTGAAAAATGGATTATATCGCTAGATCAACGTGGTG
CACCACCAAAGCACTCTCAAGTCCGTGAAATGGCGAATCTACTACTTCAA
AAGCGTGGTCAAAATACAACTATCTCTGTCGGACAAAAATGGGTTACCAA
CTACATCTCAAGGCATGATTCCTTGAAAAGTCGATATAGCCGTCAAATCA
ACTACAAACGAGCGAAGTGTGAAGAACCTGAAGCTATTCAGATGTGGTTT
AAACGCGTACAAACTGCTATATCAACATACGGCATTGTCGATGAAGATAT
CTACAACTTTGATGAAACTGGCTTTGCTATGGGTATCCTGGGTACTACTA
AAGTAGTAACACGCTCAACATGTCAAGGAAGACCCTTTCTTATACAGCCA
GGGAATCGCGAATGGATAACTTCAATTGAGTGTATCAATGCTGCTGGATG
GGTGCTACCAGCATATTTAGTGTTGAAAGCAAAAACACATATTCAAGCGT
GGTACGAAGGAAGTCTACCATCTTCCTGGAGGATTGCTATATCCTCAAAC
GGATGGACTACACGAGAGATTGGTGAAGCATGGCTCAAAGATCATTTCAT
TCCGTATATCAAAACACGAAGAACAGCCTTTAGATGTTGCATGCTTTCCA
CCTTTGAAGAAGGCCTACAAAGATCAAGTTCAACAGCTTATCCGTACGGG
ATATCATCATATCGAGAAGCGCTTTTAGAGCTTCAGGTCTTGTTCCTCTA
GATGCCTAAATCATCAAAAGAGCTCGTGGAACAAGAGGGCAGGCTCTGTT
TAGCAGTTGAATCTATTCAGAAAGGTCATACAAAGTCTATTCGTGAAGCT
GCACGTGTTTTTCAAGTTCCCCGATCAACACTTCAAGATCGCCTAAATGG
ACTCAAATTTCGCAAGGATACTAGAGCCAACTCACATAAATTGACCTCTA
TAGAGGAAGAATCACTTGAAAAATGGATTATATCGCTAGATCAACGTGGT
GCACCACCAAAGCACTCTCAAGTCCGTGAAATGGCGAATCTACTACTTCA
AAAGCGTGGTCAAAATACAACTATCTCTGTCGGACAAAAATGGGTTACCA
ACTACATCTCAAGGCATGATTCCTTGAAAAGTCGATATAGCCGTCAAATC
AACTACAAACGAGCGAAGTGTGAAGAACCTGAAGCTATTCAGATGTGGTT
TAAACGCGTACAAACTGCTATATCAACATACGGCATTGTCGATGAAGATA
TCTACAACTTTGATGAAACTGGCTTTGCTATGGGTATCCTGGGTACTACT
AAAGTAGTAACACGCTCAACATGTCAAGGAAGACCCTTTCTTATACAGCC
AGGGAATCGCGAATGGATAACTTCAATTGAGTGTATCAATGCTGCTGGAT
GGGTGCTACCAGCATATTTAGTGTTGAAAGCAAAAACACATATTCAAGCG
TGGTACGAAGGAAGTCTACCATCTTCCTGGAGGATTGCTATATCCTCAAA
CGGATGGACTACACGAGAGATTGGTGAAGCATGGCTCAAAGATCATTTCA
TTCCGTATATCAAAACACGAAGAACAGCCTTTAGATGTTGCATGCTTTCC
ACCTTTGAAGAAGGCCTACAAAGATCAAGTTCAACAGCTTATCCGTACGG
GATATCATCATATCGAGAAGCGCTTTTAGAGCTTCAGGTCTTGTTCCTCT
AGATGCCTAAATCATCAAAAGAGCTCGTGGAACAAGAGGGCAGGCTCTGT
TTAGCAGTTGAATCTATTCAGAAAGGTCATACAAAGTCTATTCGTGAAGC
TGCACGTGTTTTTCAAGTTCCCCGATCAACACTTCAAGATCGCCTAAATG
GACTCAAATTTCGCAAGGATACTAGAGCCAACTCACATAAATTGACCTCT
ATAGAGGAAGAATCACTTGAAAAATGGATTATATCGCTAGATCAACGTGG
TGCACCACCAAAGCACTCTCAAGTCCGTGAAATGGCGAATCTACTACTTC
AAAAGCGTGGTCAAAATACAACTATCTCTGTCGGACAAAAATGGGTTACC
AACTACATCTCAAGGCATGATTCCTTGAAAAGTCGATATAGCCGTCAAAT
CAACTACAAACGAGCGAAGTGTGAAGAACCTGAAGCTATTCAGATGTGGT
TTAAACGCGTACAAACTGCTATATCAACATACGGCATTGTCGATGAAGAT
ATCTACAACTTTGATGAAACTGGCTTTGCTATGGGTATCCTGGGTACTAC
TAAAGTAGTAACACGCTCAACATGTCAAGGAAGACCCTTTCTTATACAGC
CAGGGAATCGCGAATGGATAACTTCAATTGAGTGTATCAATGCTGCTGGA
TGGGTGCTACCAGCATATTTAGTGTTGAAAGCAAAAACACATATTCAAGC
GTGGTACGAAGGAAGTCTACCATCTTCCTGGAGGATTGCTATATCCTCAA
ACGGATGGACTACACGAGAGATTGGTGAAGCATGGCTCAAAGATCATTTC
ATTCCGTATATCAAAACACGAAGAACAGCCTTTAGATGTTGCATGCTTTC
CACCTTTGAAGAAGGCCTACAAAGATCAAGTTCAACAGCTTATCCGTACG
GGATATCATCATATCGAGAAGCGCTTTTAGAGCTTCAGGTCTTGTTCCTC
TAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012954KJC3_012954Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012954-T1KJC3_012954-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012954-T1.utr5p1KJC3_012954-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012954-T1.exon1KJC3_012954-T1.exon1Aspergillus niger KJC3exon
KJC3_012954-T1.exon2KJC3_012954-T1.exon2Aspergillus niger KJC3exon
KJC3_012954-T1.exon3KJC3_012954-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012954-T1.cdsKJC3_012954-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012954-T1.utr3p1KJC3_012954-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR004875
DBxrefInterPro:IPR007889
DBxrefInterPro:IPR006600
DBxrefPFAM:PF03221
DBxrefPFAM:PF05225
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC12FsupercontigJC12F:212510..214206 +
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