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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC14F:147083..148944- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012962-T1 ID=KJC3_012962-T1|Name=KJC3_012962-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1862bp|location=Sequence derived from alignment at JC14F:147083..148944- (Aspergillus niger KJC3)
CTCATTTCTTGCGGTTAGTCCACTCACAGGTCGCTCTAACTATTGCCGAG
TATACCGATACAAACACGACCAACTTCAATCCGGAACTCTACTCCGCACA
CAGCTTCGGCTGTGACTGGTACGTCTCTAGGTCGCAGGGATTCCCGGGTG
ACAGTAGGTCAAGTCCCACCCGCTATGACCTGATAGAATTCCACTATTTA
TATAGGACGAGCAAGCCATGGCTATAGCGTTAGTGGTCAAGTTAGAGTGA
AAGTCCTCTGATTCATGCCTGTCCTTTAAAAGGACCCGGGACTGCCATCG
CGGTCCATCCTAATATCAACTTGCGCTCGTTTACCGCCTCAGATTTTGGT
TACTGGCATTGGAATGATCGCCCTGCCATTTGAGGAAGGCTCTACCCACT
CAGCCCTGTGGAAGCATGTCAGAAGCATCTGCAGCCACGACTAAACCAAC
TGAAATTGGGACCGAGGCGTCCGTGTTTCTCCAAGCCACACCAGGAAACC
CGATGTCTGAGCCACCACCGCCATATTTCCAGTCTTGGTTCATGCCTGGT
ACCGGTTGTGAGGATCTCAGACAGCATCTCCCGTGCATCTCCGATGGTCT
CCCCCAAGGTTCTGGGAAACACGCCGTGGTAGGCGCGCACACCCATTTTC
GAACTAGAAGCTGCAAAAGTATCAAACTCTGACGATCCTAGAGCTTCGAT
CAGCCTGTCCATGTGCCAGAGATTGCGGTCAACAACTCATACCATTTGGT
CCCACAGCCGGTGAGAAGCGTTCCCCCTCCGCCTCACCTGGAAGCCAGGC
GTACCTACTGGCCTTCTGCTGATATCTCTAGATCTGTGGCGGAACCCAAG
TCCACGCGAACTCGCTGATCCCGGCAAAGGGAACCGAGGCGGACCAGATG
AAATCAAAGTCTGTGTGCCGGAATCACAGACTCCGGCTGTCGAATCGCGC
CGTAGCCACGACAAGGAACAACCAAGTCGACCACGCAGTGATAAGCAGCC
AAGATCTAGACCTGCCATGTCCGCTGAGTGCGCTGACCGACGGCATGCAG
CACATTCCGGTTAGAGACATGTACGCCTGGGTGGACCGCCCGGTCGAGAC
GCGCCGCCAGGAGGCACTGCAACGGCATAAAAGAGTCCCACGCCCACTGA
ATTCATTCATACTGTACCGGCTGGCGTACAGTGATCGAGTAAAATACTGG
CTCGGCCGGAATGACCATCAGACCATCTCCAGACTCAGCGGACAGAGCTG
GAAGATGGAAGCCCCTCACATTCGGCAGCAATACGAGACGCTCGCGGAGA
AGGAGAAACGGAACCATGCCAGGGCACATCCGGGATATCGCTTTTCGCCG
TCAAACAAGCGGGGACAACCGCGGACCGCAAAAGGCCGTTCTCAGGAGTT
GGCGTTGCGCTCGAAGGCGTTCCCTAACCTTGGCCAGAATCCACAGCCTA
CCGCTTGGTCCCCTTCGGCGGATAATGATCGCGCTAGTGAACGCTCAACA
GAAGCTTCTCCTGCGGAAGAGGGAACCCTCATCCACAGCGATTCCTTGAA
TCCAGATGGCTTTATACCACTGGGCAGTGCCGCCTCGGTATGGGAGCATT
GGATGTCCTATTCCCAGACGACCTCTGCCGATCATGGCTCCAAAGGCACC
CAGCCTTGTTTGCCTGTCGCCACGGGGCAAACAGAGATACCTGCCATTGC
TTGCTTTGTTCCCCAGCCTGCAGCCCCTGGAATCAATGCTGCCAATAGTC
GGTCTGCTTCACTGCCACTGTCTGTTCCGTATGAGATGTATAGTTTTTGT
GAGGAATGGCCTATCGAAGGAAAGTAGTTGGCTAGGACTGCAGGCTAGGA
GATAGAAGATAT back to topCoding sequence (CDS) from alignment at JC14F:147083..148944- >KJC3_012962-T1 ID=KJC3_012962-T1|Name=KJC3_012962-T1|organism=Aspergillus niger KJC3|type=CDS|length=3834bp|location=Sequence derived from alignment at JC14F:147083..148944- (Aspergillus niger KJC3)
ATCTGTGGCGGAACCCAAGTCCACGCGAACTCGCTGATCCCGGCAAAGGG
AACCGAGGCGGACCAGATGAAATCAAAGTCTGTGTGCCGGAATCACAGAC
TCCGGCTGTCGAATCGCGCCGTAGCCACGACAAGGAACAACCAAGTCGAC
CACGCAGTGATAAGCAGCCAAGATCTAGACCTGCCATGTCCGCTGAGTGC
GCTGACCGACGGCATGCAGCACATTCCGGTTAGAGACATGTACGCCTGGG
TGGACCGCCCGGTCGAGACGCGCCGCCAGGAGGCACTGCAACGGCATAAA
AGAGTCCCACGCCCACTGAATTCATTCATACTGTACCGGCTGGCGTACAG
TGATCGAGTAAAATACTGGCTCGGCCGGAATGACCATCAGACCATCTCCA
GACTCAGCGGACAGAGCTGGAAGATGGAAGCCCCTCACATTCGGCAGCAA
TACGAGACGCTCGCGGAGAAGGAGAAACGGAACCATGCCAGGGCACATCC
GGGATATCGCTTTTCGCCGTCAAACAAGCGGGGACAACCGCGGACCGCAA
AAGGCCGTTCTCAGGAGTTGGCGTTGCGCTCGAAGGCGTTCCCTAACCTT
GGCCAGAATCCACAGCCTACCGCTTGGTCCCCTTCGGCGGATAATGATCG
CGCTAGTGAACGCTCAACAGAAGCTTCTCCTGCGGAAGAGGGAACCCTCA
TCCACAGCGATTCCTTGAATCCAGATGGCTTTATACCACTGGGCAGTGCC
GCCTCGGTATGGGAGCATTGGATGTCCTATTCCCAGACGACCTCTGCCGA
TCATGGCTCCAAAGGCACCCAGCCTTGTTTGCCTGTCGCCACGGGGCAAA
CAGAGATACCTGCCATTGCTTGCTTTGTTCCCCAGCCTGCAGCCCCTGGA
ATCAATGCTGCCAATAGTCGGTCTGCTTCACTGCCACTGTCTGTTCCGTA
TGAGATGTATAGTTTTTGTGAGGAATGGCCTATCGAAGGAAAGTAGAGCT
TCGATCAGCCTGTCCATGTGCCAGAGATTGCGGTCAACAACTCATACCAT
TTGGTCCCACAGCCGATGTCAGAAGCATCTGCAGCCACGACTAAACCAAC
TGAAATTGGGACCGAGGCGTCCGTGTTTCTCCAAGCCACACCAGGAAACC
CGATGTCTGAGCCACCACCGCCATATTTCCAGTCTTGGTTCATGCCTGGT
ACCGGTTGTGAGGATCTCAGACAGCATCTCCCGTGCATCTCCGATGGTCT
CCCCCAAGGTTCTGGGAAACACGCCGTGATCTGTGGCGGAACCCAAGTCC
ACGCGAACTCGCTGATCCCGGCAAAGGGAACCGAGGCGGACCAGATGAAA
TCAAAGTCTGTGTGCCGGAATCACAGACTCCGGCTGTCGAATCGCGCCGT
AGCCACGACAAGGAACAACCAAGTCGACCACGCAGTGATAAGCAGCCAAG
ATCTAGACCTGCCATGTCCGCTGAGTGCGCTGACCGACGGCATGCAGCAC
ATTCCGGTTAGAGACATGTACGCCTGGGTGGACCGCCCGGTCGAGACGCG
CCGCCAGGAGGCACTGCAACGGCATAAAAGAGTCCCACGCCCACTGAATT
CATTCATACTGTACCGGCTGGCGTACAGTGATCGAGTAAAATACTGGCTC
GGCCGGAATGACCATCAGACCATCTCCAGACTCAGCGGACAGAGCTGGAA
GATGGAAGCCCCTCACATTCGGCAGCAATACGAGACGCTCGCGGAGAAGG
AGAAACGGAACCATGCCAGGGCACATCCGGGATATCGCTTTTCGCCGTCA
AACAAGCGGGGACAACCGCGGACCGCAAAAGGCCGTTCTCAGGAGTTGGC
GTTGCGCTCGAAGGCGTTCCCTAACCTTGGCCAGAATCCACAGCCTACCG
CTTGGTCCCCTTCGGCGGATAATGATCGCGCTAGTGAACGCTCAACAGAA
GCTTCTCCTGCGGAAGAGGGAACCCTCATCCACAGCGATTCCTTGAATCC
AGATGGCTTTATACCACTGGGCAGTGCCGCCTCGGTATGGGAGCATTGGA
TGTCCTATTCCCAGACGACCTCTGCCGATCATGGCTCCAAAGGCACCCAG
CCTTGTTTGCCTGTCGCCACGGGGCAAACAGAGATACCTGCCATTGCTTG
CTTTGTTCCCCAGCCTGCAGCCCCTGGAATCAATGCTGCCAATAGTCGGT
CTGCTTCACTGCCACTGTCTGTTCCGTATGAGATGTATAGTTTTTGTGAG
GAATGGCCTATCGAAGGAAAGTAGAGCTTCGATCAGCCTGTCCATGTGCC
AGAGATTGCGGTCAACAACTCATACCATTTGGTCCCACAGCCGATGTCAG
AAGCATCTGCAGCCACGACTAAACCAACTGAAATTGGGACCGAGGCGTCC
GTGTTTCTCCAAGCCACACCAGGAAACCCGATGTCTGAGCCACCACCGCC
ATATTTCCAGTCTTGGTTCATGCCTGGTACCGGTTGTGAGGATCTCAGAC
AGCATCTCCCGTGCATCTCCGATGGTCTCCCCCAAGGTTCTGGGAAACAC
GCCGTGATCTGTGGCGGAACCCAAGTCCACGCGAACTCGCTGATCCCGGC
AAAGGGAACCGAGGCGGACCAGATGAAATCAAAGTCTGTGTGCCGGAATC
ACAGACTCCGGCTGTCGAATCGCGCCGTAGCCACGACAAGGAACAACCAA
GTCGACCACGCAGTGATAAGCAGCCAAGATCTAGACCTGCCATGTCCGCT
GAGTGCGCTGACCGACGGCATGCAGCACATTCCGGTTAGAGACATGTACG
CCTGGGTGGACCGCCCGGTCGAGACGCGCCGCCAGGAGGCACTGCAACGG
CATAAAAGAGTCCCACGCCCACTGAATTCATTCATACTGTACCGGCTGGC
GTACAGTGATCGAGTAAAATACTGGCTCGGCCGGAATGACCATCAGACCA
TCTCCAGACTCAGCGGACAGAGCTGGAAGATGGAAGCCCCTCACATTCGG
CAGCAATACGAGACGCTCGCGGAGAAGGAGAAACGGAACCATGCCAGGGC
ACATCCGGGATATCGCTTTTCGCCGTCAAACAAGCGGGGACAACCGCGGA
CCGCAAAAGGCCGTTCTCAGGAGTTGGCGTTGCGCTCGAAGGCGTTCCCT
AACCTTGGCCAGAATCCACAGCCTACCGCTTGGTCCCCTTCGGCGGATAA
TGATCGCGCTAGTGAACGCTCAACAGAAGCTTCTCCTGCGGAAGAGGGAA
CCCTCATCCACAGCGATTCCTTGAATCCAGATGGCTTTATACCACTGGGC
AGTGCCGCCTCGGTATGGGAGCATTGGATGTCCTATTCCCAGACGACCTC
TGCCGATCATGGCTCCAAAGGCACCCAGCCTTGTTTGCCTGTCGCCACGG
GGCAAACAGAGATACCTGCCATTGCTTGCTTTGTTCCCCAGCCTGCAGCC
CCTGGAATCAATGCTGCCAATAGTCGGTCTGCTTCACTGCCACTGTCTGT
TCCGTATGAGATGTATAGTTTTTGTGAGGAATGGCCTATCGAAGGAAAGT
AGAGCTTCGATCAGCCTGTCCATGTGCCAGAGATTGCGGTCAACAACTCA
TACCATTTGGTCCCACAGCCGATGTCAGAAGCATCTGCAGCCACGACTAA
ACCAACTGAAATTGGGACCGAGGCGTCCGTGTTTCTCCAAGCCACACCAG
GAAACCCGATGTCTGAGCCACCACCGCCATATTTCCAGTCTTGGTTCATG
CCTGGTACCGGTTGTGAGGATCTCAGACAGCATCTCCCGTGCATCTCCGA
TGGTCTCCCCCAAGGTTCTGGGAAACACGCCGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012962-T1.utr3p1 | KJC3_012962-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012962-T1.utr5p1 | KJC3_012962-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036910 |
| DBxref | InterPro:IPR009071 |
| DBxref | PFAM:PF00505 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC14F | supercontig | JC14F:147083..148944 - |
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