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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC14F:162169..164843- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012963-T1 ID=KJC3_012963-T1|Name=KJC3_012963-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2675bp|location=Sequence derived from alignment at JC14F:162169..164843- (Aspergillus niger KJC3)
TGAATGGGAATGTTTACAATCTTCCTATCCTCAATCCCCCTTTCAGTTTC
TTACCTCAGCCCAGGTAGTTCAAGGTATGTTATGCATCACCGTCGATAAC
ACTTTGATATACTGATATCGGGAAATAGTAGCATGGCATCTACACCTGAT
CTGTTCATGCGGAGGACGCGCGGTCTTCCACGTCGGGATTATAATGCTCT
GCACAATGGCCTGATTTCTTCGCCTTCACAGCAGTCTGAGGGATCTACCT
GTGAAACAGGACACCCTTCCTCTCCTGAGCCCTCTTCGCCTAGGGACCTG
GAAAACACACCTCAATCGAAGCGGTCTTACTCTTTGCTTAGCTCCTCGCC
TTCCCCGCTTGATCCTGCCTTTTCAGAGAGCAGGAGCGATGCGAGTAGTC
CGCACCCGTGTAAAAGACGAAAGCCCAAATCATATTCTAGTTGGACTATT
GAGCACTTTTGGACTACAGATCTGGATAACACTTGGTGTCGGCAGGGTGG
CCCTCCGAAAAAAGACCGACTGCTAATTTGTAAACATTGCAATTGGTCCT
CCAGAGATTCAGCGCGCTATGGTTCCACTTCAAATTTGTTGGTGCATCTC
CAGACCAAGCATCGTATCAAGTCCGGGGACGACTCCATCTTCTTGCCCGC
GGTGGAGGGGAGTCTCGACCGGTTCTTGGAGTCCCCGAGAAAGAAGGCTG
GTGTTGAAGAGATGCTAGTTCGGTGGGTCATTCAAACAAGACAGCCTTCT
ACAGTGGTAGAGCATCCGGCTTTCAGGGCACTCATTGAAGCAACGGGAGC
CACGTTGCCCATCAAGACTGCTGATACTCTCTTCAACCGAATCAAGGAAG
ATTTCCAATCAAGTAGGGCTTCCGTGAAAGAGGAGCTTGCGAGGAGTAGC
CGGACATTGGCTTTGTCCCTTGACGTTTGGACGTCGGAAAATCAGATTCC
GATCATGGGTATCATTGGCCATTGGATCTCTCCCGAGTTTGACAAGCGCG
ATGAGCTTCTCGAGTTCACCGAAATCAATGGACCACATTCTGGAGAGAAT
CTAGCGGATGTTGTGTTGAATATGCTTGACGAACTGGACATCGCGCCAAA
GCTCCTAACCATCACAGGGGACAATGCAGGCAATAATGGGACGCTCTGCG
ATAGCCTTCACGATCAGCTCCTCAAGAAGTATGATAATGACGACGACTGC
TTTCGTATTAGGCCTCTCATGCGGTTCCGTGGACGGCAAAGCTTCATTCC
CTGCCTCGCGCATATCCTCAATCTGATCTGTAGAGATGTGCTCGCTTCCT
TAAGGGCTGGCTCGGCTCGGGAAGCAAAGGCGATACTGGACGACATGGCC
ATCCATTCTAGAGCAGCAGCATTCAACTCCCTTCACAGTACAAAAGGAGC
TATCATGAAAGTCCGGCTCCTGACGCTATGGATTGCCCGTAGCCCACAGC
GCCGCCAAGATTGGAAAGAAGTGTCACCCGGCAAACAAGTTAGTTATGAT
GTTGACACGCGATGGAATTCGACTTATATCATGATCCAGGATGCACTTCG
GCTGCAAACTCAGCTCGGACAATTTACTCGGATACATCCAGAAGTTCAGG
CTCTTCAGCTTACCGTTGACGAATGGTCGACACTTCAGCAAGTAGCTGAG
ATTCTTAAGCCGTTCTGGGATCACACAAACTCCGTCTCAAAGACTTGCCC
AACAATTGTTCAAAGTCTACCGATTTACTGGAGCTTGGACGACTTGTTGA
ATGAGGTTCGAAATGCGGAGGGGGATTTTGAAGATGTGAGCGTTGAGATT
CGCGATGCGGTGGAAGGAGGAATTCGAAAGATGAACAAATTTGCTAGAAA
AATGGACGACAACCTTCTTTACTATGTGGCTTCGGTTCTTGATCCGCGAA
TCAAGTCGTCCTTGATTGTGTCTCAGATGAGCGAACAGGATTCAGGGTTT
ATCATTTCTCAAGTGCGGGATTTCTTAAAAAAGGAGTACCCCCCAGAGCC
ATTGGTTTCCCGGGAAGTTGACCTACCACGTCCACCGGGGATGTCAGAAA
CAATGTGGAGGACTCTGCGCAAAGTCCAGCCATCCAAAGAGGCTTCTTTG
TCGGATATCGATAAGTATTTGGATTCCCCGCCGGTCAACTGGTCCCACCA
TATGATCGACGATGCAGACACAGAATGGGTCCTCAAATTGTGGAAGGCTA
ACGCGTTTAATTTTCCACTCCTGGCAAAAGCTGCTCGTGACTATCTCCCC
ATCCCTTCGGCAGAGGTCGGGATTGAACGTGAGTTTAGCAGCGCTAGAGA
TGTCTTGGGTCTTCGAAGACACTGTCTGAACGCGGAGACTATGCGATGGT
TGATGCTCTTGAGAGGGCAGTATCAGACATAATGTGAGAGCCGTGCATGA
ATGTAAAATTCATTGATGAGGTGCTCAAGTCTTGTATGTTACCTGTATGG
ACCAGACTATATGAGCTTGGTGGATAGATGTATTGGGATGTAATAAAATG
AATGGTCATGTATGGTATTTTATTATTTGAATAAATATGAATTATTCATT
TATTCATGAATAGTGCGAATATGAATAAACCCTTTATTCATATTCATATT
ATTCAATTCATATTATTCATATTCGCAAATATTCATGAATATTCACAAAT
AATCATATTCCTTTCGGAGCCCTAG back to topCoding sequence (CDS) from alignment at JC14F:162169..164843- >KJC3_012963-T1 ID=KJC3_012963-T1|Name=KJC3_012963-T1|organism=Aspergillus niger KJC3|type=CDS|length=4650bp|location=Sequence derived from alignment at JC14F:162169..164843- (Aspergillus niger KJC3)
TAGCATGGCATCTACACCTGATCTGTTCATGCGGAGGACGCGCGGTCTTC
CACGTCGGGATTATAATGCTCTGCACAATGGCCTGATTTCTTCGCCTTCA
CAGCAGTCTGAGGGATCTACCTGTGAAACAGGACACCCTTCCTCTCCTGA
GCCCTCTTCGCCTAGGGACCTGGAAAACACACCTCAATCGAAGCGGTCTT
ACTCTTTGCTTAGCTCCTCGCCTTCCCCGCTTGATCCTGCCTTTTCAGAG
AGCAGGAGCGATGCGAGTAGTCCGCACCCGTGTAAAAGACGAAAGCCCAA
ATCATATTCTAGTTGGACTATTGAGCACTTTTGGACTACAGATCTGGATA
ACACTTGGTGTCGGCAGGGTGGCCCTCCGAAAAAAGACCGACTGCTAATT
TGTAAACATTGCAATTGGTCCTCCAGAGATTCAGCGCGCTATGGTTCCAC
TTCAAATTTGTTGGTGCATCTCCAGACCAAGCATCGTATCAAGTCCGGGG
ACGACTCCATCTTCTTGCCCGCGGTGGAGGGGAGTCTCGACCGGTTCTTG
GAGTCCCCGAGAAAGAAGGCTGGTGTTGAAGAGATGCTAGTTCGGTGGGT
CATTCAAACAAGACAGCCTTCTACAGTGGTAGAGCATCCGGCTTTCAGGG
CACTCATTGAAGCAACGGGAGCCACGTTGCCCATCAAGACTGCTGATACT
CTCTTCAACCGAATCAAGGAAGATTTCCAATCAAGTAGGGCTTCCGTGAA
AGAGGAGCTTGCGAGGAGTAGCCGGACATTGGCTTTGTCCCTTGACGTTT
GGACGTCGGAAAATCAGATTCCGATCATGGGTATCATTGGCCATTGGATC
TCTCCCGAGTTTGACAAGCGCGATGAGCTTCTCGAGTTCACCGAAATCAA
TGGACCACATTCTGGAGAGAATCTAGCGGATGTTGTGTTGAATATGCTTG
ACGAACTGGACATCGCGCCAAAGCTCCTAACCATCACAGGGGACAATGCA
GGCAATAATGGGACGCTCTGCGATAGCCTTCACGATCAGCTCCTCAAGAA
GTATGATAATGACGACGACTGCTTTCGTATTAGGCCTCTCATGCGGTTCC
GTGGACGGCAAAGCTTCATTCCCTGCCTCGCGCATATCCTCAATCTGATC
TGTAGAGATGTGCTCGCTTCCTTAAGGGCTGGCTCGGCTCGGGAAGCAAA
GGCGATACTGGACGACATGGCCATCCATTCTAGAGCAGCAGCATTCAACT
CCCTTCACAGTACAAAAGGAGCTATCATGAAAGTCCGGCTCCTGACGCTA
TGGATTGCCCGTAGCCCACAGCGCCGCCAAGATTGGAAAGAAGTGTCACC
CGGCAAACAAGTTAGTTATGATGTTGACACGCGATGGAATTCGACTTATA
TCATGATCCAGGATGCACTTCGGCTGCAAACTCAGCTCGGACAATTTACT
CGGATACATCCAGAAGTTCAGGCTCTTCAGCTTACCGTTGACGAATGGTC
GACACTTCAGCAAGTAGCTGAGATTCTTAAGCCGTTCTGGGATCACACAA
ACTCCGTCTCAAAGACTTGCCCAACAATTGTTCAAAGTCTACCGATTTAC
TGGAGCTTGGACGACTTGTTGAATGAGGTTCGAAATGCGGAGGGGGATTT
TGAAGATGTGAGCGTTGAGATTCGCGATGCGGTGGAAGGAGGAATTCGAA
AGATGAACAAATTTGCTAGAAAAATGGACGACAACCTTCTTTACTATGTG
GCTTCGGTTCTTGATCCGCGAATCAAGTCGTCCTTGATTGTGTCTCAGAT
GAGCGAACAGGATTCAGGGTTTATCATTTCTCAAGTGCGGGATTTCTTAA
AAAAGGAGTACCCCCCAGAGCCATTGGTTTCCCGGGAAGTTGACCTACCA
CGTCCACCGGGGATGTCAGAAACAATGTGGAGGACTCTGCGCAAAGTCCA
GCCATCCAAAGAGGCTTCTTTGTCGGATATCGATAAGTATTTGGATTCCC
CGCCGGTCAACTGGTCCCACCATATGATCGACGATGCAGACACAGAATGG
GTCCTCAAATTGTGGAAGGCTAACGCGTTTAATTTTCCACTCCTGGCAAA
AGCTGCTCGTGACTATCTCCCCATCCCTTCGGCAGAGGTCGGGATTGAAC
GTGAGTTTAGCAGCGCTAGAGATGTCTTGGGTCTTCGAAGACACTGTCTG
AACGCGGAGACTATGCGATGGTTGATGCTCTTGAGAGGGCAGTATCAGAC
ATAAATGGGAATGTTTACAATCTTCCTATCCTCAATCCCCCTTTCAGTTT
CTTACCTCAGCCCAGGTAGTTCAAGTAGCATGGCATCTACACCTGATCTG
TTCATGCGGAGGACGCGCGGTCTTCCACGTCGGGATTATAATGCTCTGCA
CAATGGCCTGATTTCTTCGCCTTCACAGCAGTCTGAGGGATCTACCTGTG
AAACAGGACACCCTTCCTCTCCTGAGCCCTCTTCGCCTAGGGACCTGGAA
AACACACCTCAATCGAAGCGGTCTTACTCTTTGCTTAGCTCCTCGCCTTC
CCCGCTTGATCCTGCCTTTTCAGAGAGCAGGAGCGATGCGAGTAGTCCGC
ACCCGTGTAAAAGACGAAAGCCCAAATCATATTCTAGTTGGACTATTGAG
CACTTTTGGACTACAGATCTGGATAACACTTGGTGTCGGCAGGGTGGCCC
TCCGAAAAAAGACCGACTGCTAATTTGTAAACATTGCAATTGGTCCTCCA
GAGATTCAGCGCGCTATGGTTCCACTTCAAATTTGTTGGTGCATCTCCAG
ACCAAGCATCGTATCAAGTCCGGGGACGACTCCATCTTCTTGCCCGCGGT
GGAGGGGAGTCTCGACCGGTTCTTGGAGTCCCCGAGAAAGAAGGCTGGTG
TTGAAGAGATGCTAGTTCGGTGGGTCATTCAAACAAGACAGCCTTCTACA
GTGGTAGAGCATCCGGCTTTCAGGGCACTCATTGAAGCAACGGGAGCCAC
GTTGCCCATCAAGACTGCTGATACTCTCTTCAACCGAATCAAGGAAGATT
TCCAATCAAGTAGGGCTTCCGTGAAAGAGGAGCTTGCGAGGAGTAGCCGG
ACATTGGCTTTGTCCCTTGACGTTTGGACGTCGGAAAATCAGATTCCGAT
CATGGGTATCATTGGCCATTGGATCTCTCCCGAGTTTGACAAGCGCGATG
AGCTTCTCGAGTTCACCGAAATCAATGGACCACATTCTGGAGAGAATCTA
GCGGATGTTGTGTTGAATATGCTTGACGAACTGGACATCGCGCCAAAGCT
CCTAACCATCACAGGGGACAATGCAGGCAATAATGGGACGCTCTGCGATA
GCCTTCACGATCAGCTCCTCAAGAAGTATGATAATGACGACGACTGCTTT
CGTATTAGGCCTCTCATGCGGTTCCGTGGACGGCAAAGCTTCATTCCCTG
CCTCGCGCATATCCTCAATCTGATCTGTAGAGATGTGCTCGCTTCCTTAA
GGGCTGGCTCGGCTCGGGAAGCAAAGGCGATACTGGACGACATGGCCATC
CATTCTAGAGCAGCAGCATTCAACTCCCTTCACAGTACAAAAGGAGCTAT
CATGAAAGTCCGGCTCCTGACGCTATGGATTGCCCGTAGCCCACAGCGCC
GCCAAGATTGGAAAGAAGTGTCACCCGGCAAACAAGTTAGTTATGATGTT
GACACGCGATGGAATTCGACTTATATCATGATCCAGGATGCACTTCGGCT
GCAAACTCAGCTCGGACAATTTACTCGGATACATCCAGAAGTTCAGGCTC
TTCAGCTTACCGTTGACGAATGGTCGACACTTCAGCAAGTAGCTGAGATT
CTTAAGCCGTTCTGGGATCACACAAACTCCGTCTCAAAGACTTGCCCAAC
AATTGTTCAAAGTCTACCGATTTACTGGAGCTTGGACGACTTGTTGAATG
AGGTTCGAAATGCGGAGGGGGATTTTGAAGATGTGAGCGTTGAGATTCGC
GATGCGGTGGAAGGAGGAATTCGAAAGATGAACAAATTTGCTAGAAAAAT
GGACGACAACCTTCTTTACTATGTGGCTTCGGTTCTTGATCCGCGAATCA
AGTCGTCCTTGATTGTGTCTCAGATGAGCGAACAGGATTCAGGGTTTATC
ATTTCTCAAGTGCGGGATTTCTTAAAAAAGGAGTACCCCCCAGAGCCATT
GGTTTCCCGGGAAGTTGACCTACCACGTCCACCGGGGATGTCAGAAACAA
TGTGGAGGACTCTGCGCAAAGTCCAGCCATCCAAAGAGGCTTCTTTGTCG
GATATCGATAAGTATTTGGATTCCCCGCCGGTCAACTGGTCCCACCATAT
GATCGACGATGCAGACACAGAATGGGTCCTCAAATTGTGGAAGGCTAACG
CGTTTAATTTTCCACTCCTGGCAAAAGCTGCTCGTGACTATCTCCCCATC
CCTTCGGCAGAGGTCGGGATTGAACGTGAGTTTAGCAGCGCTAGAGATGT
CTTGGGTCTTCGAAGACACTGTCTGAACGCGGAGACTATGCGATGGTTGA
TGCTCTTGAGAGGGCAGTATCAGACATAAATGGGAATGTTTACAATCTTC
CTATCCTCAATCCCCCTTTCAGTTTCTTACCTCAGCCCAGGTAGTTCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012963-T1.utr3p1 | KJC3_012963-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012963-T1.utr5p1 | KJC3_012963-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR003656 |
| DBxref | InterPro:IPR008906 |
| DBxref | PFAM:PF02892 |
| DBxref | PFAM:PF05699 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC14F | supercontig | JC14F:162169..164843 - |
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