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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC14F:162169..164843- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012963-T1 ID=KJC3_012963-T1|Name=KJC3_012963-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2675bp|location=Sequence derived from alignment at JC14F:162169..164843- (Aspergillus niger KJC3) TGAATGGGAATGTTTACAATCTTCCTATCCTCAATCCCCCTTTCAGTTTC
TTACCTCAGCCCAGGTAGTTCAAGGTATGTTATGCATCACCGTCGATAAC
ACTTTGATATACTGATATCGGGAAATAGTAGCATGGCATCTACACCTGAT
CTGTTCATGCGGAGGACGCGCGGTCTTCCACGTCGGGATTATAATGCTCT
GCACAATGGCCTGATTTCTTCGCCTTCACAGCAGTCTGAGGGATCTACCT
GTGAAACAGGACACCCTTCCTCTCCTGAGCCCTCTTCGCCTAGGGACCTG
GAAAACACACCTCAATCGAAGCGGTCTTACTCTTTGCTTAGCTCCTCGCC
TTCCCCGCTTGATCCTGCCTTTTCAGAGAGCAGGAGCGATGCGAGTAGTC
CGCACCCGTGTAAAAGACGAAAGCCCAAATCATATTCTAGTTGGACTATT
GAGCACTTTTGGACTACAGATCTGGATAACACTTGGTGTCGGCAGGGTGG
CCCTCCGAAAAAAGACCGACTGCTAATTTGTAAACATTGCAATTGGTCCT
CCAGAGATTCAGCGCGCTATGGTTCCACTTCAAATTTGTTGGTGCATCTC
CAGACCAAGCATCGTATCAAGTCCGGGGACGACTCCATCTTCTTGCCCGC
GGTGGAGGGGAGTCTCGACCGGTTCTTGGAGTCCCCGAGAAAGAAGGCTG
GTGTTGAAGAGATGCTAGTTCGGTGGGTCATTCAAACAAGACAGCCTTCT
ACAGTGGTAGAGCATCCGGCTTTCAGGGCACTCATTGAAGCAACGGGAGC
CACGTTGCCCATCAAGACTGCTGATACTCTCTTCAACCGAATCAAGGAAG
ATTTCCAATCAAGTAGGGCTTCCGTGAAAGAGGAGCTTGCGAGGAGTAGC
CGGACATTGGCTTTGTCCCTTGACGTTTGGACGTCGGAAAATCAGATTCC
GATCATGGGTATCATTGGCCATTGGATCTCTCCCGAGTTTGACAAGCGCG
ATGAGCTTCTCGAGTTCACCGAAATCAATGGACCACATTCTGGAGAGAAT
CTAGCGGATGTTGTGTTGAATATGCTTGACGAACTGGACATCGCGCCAAA
GCTCCTAACCATCACAGGGGACAATGCAGGCAATAATGGGACGCTCTGCG
ATAGCCTTCACGATCAGCTCCTCAAGAAGTATGATAATGACGACGACTGC
TTTCGTATTAGGCCTCTCATGCGGTTCCGTGGACGGCAAAGCTTCATTCC
CTGCCTCGCGCATATCCTCAATCTGATCTGTAGAGATGTGCTCGCTTCCT
TAAGGGCTGGCTCGGCTCGGGAAGCAAAGGCGATACTGGACGACATGGCC
ATCCATTCTAGAGCAGCAGCATTCAACTCCCTTCACAGTACAAAAGGAGC
TATCATGAAAGTCCGGCTCCTGACGCTATGGATTGCCCGTAGCCCACAGC
GCCGCCAAGATTGGAAAGAAGTGTCACCCGGCAAACAAGTTAGTTATGAT
GTTGACACGCGATGGAATTCGACTTATATCATGATCCAGGATGCACTTCG
GCTGCAAACTCAGCTCGGACAATTTACTCGGATACATCCAGAAGTTCAGG
CTCTTCAGCTTACCGTTGACGAATGGTCGACACTTCAGCAAGTAGCTGAG
ATTCTTAAGCCGTTCTGGGATCACACAAACTCCGTCTCAAAGACTTGCCC
AACAATTGTTCAAAGTCTACCGATTTACTGGAGCTTGGACGACTTGTTGA
ATGAGGTTCGAAATGCGGAGGGGGATTTTGAAGATGTGAGCGTTGAGATT
CGCGATGCGGTGGAAGGAGGAATTCGAAAGATGAACAAATTTGCTAGAAA
AATGGACGACAACCTTCTTTACTATGTGGCTTCGGTTCTTGATCCGCGAA
TCAAGTCGTCCTTGATTGTGTCTCAGATGAGCGAACAGGATTCAGGGTTT
ATCATTTCTCAAGTGCGGGATTTCTTAAAAAAGGAGTACCCCCCAGAGCC
ATTGGTTTCCCGGGAAGTTGACCTACCACGTCCACCGGGGATGTCAGAAA
CAATGTGGAGGACTCTGCGCAAAGTCCAGCCATCCAAAGAGGCTTCTTTG
TCGGATATCGATAAGTATTTGGATTCCCCGCCGGTCAACTGGTCCCACCA
TATGATCGACGATGCAGACACAGAATGGGTCCTCAAATTGTGGAAGGCTA
ACGCGTTTAATTTTCCACTCCTGGCAAAAGCTGCTCGTGACTATCTCCCC
ATCCCTTCGGCAGAGGTCGGGATTGAACGTGAGTTTAGCAGCGCTAGAGA
TGTCTTGGGTCTTCGAAGACACTGTCTGAACGCGGAGACTATGCGATGGT
TGATGCTCTTGAGAGGGCAGTATCAGACATAATGTGAGAGCCGTGCATGA
ATGTAAAATTCATTGATGAGGTGCTCAAGTCTTGTATGTTACCTGTATGG
ACCAGACTATATGAGCTTGGTGGATAGATGTATTGGGATGTAATAAAATG
AATGGTCATGTATGGTATTTTATTATTTGAATAAATATGAATTATTCATT
TATTCATGAATAGTGCGAATATGAATAAACCCTTTATTCATATTCATATT
ATTCAATTCATATTATTCATATTCGCAAATATTCATGAATATTCACAAAT
AATCATATTCCTTTCGGAGCCCTAG back to topCoding sequence (CDS) from alignment at JC14F:162169..164843- >KJC3_012963-T1 ID=KJC3_012963-T1|Name=KJC3_012963-T1|organism=Aspergillus niger KJC3|type=CDS|length=4650bp|location=Sequence derived from alignment at JC14F:162169..164843- (Aspergillus niger KJC3) TAGCATGGCATCTACACCTGATCTGTTCATGCGGAGGACGCGCGGTCTTC CACGTCGGGATTATAATGCTCTGCACAATGGCCTGATTTCTTCGCCTTCA CAGCAGTCTGAGGGATCTACCTGTGAAACAGGACACCCTTCCTCTCCTGA GCCCTCTTCGCCTAGGGACCTGGAAAACACACCTCAATCGAAGCGGTCTT ACTCTTTGCTTAGCTCCTCGCCTTCCCCGCTTGATCCTGCCTTTTCAGAG AGCAGGAGCGATGCGAGTAGTCCGCACCCGTGTAAAAGACGAAAGCCCAA ATCATATTCTAGTTGGACTATTGAGCACTTTTGGACTACAGATCTGGATA ACACTTGGTGTCGGCAGGGTGGCCCTCCGAAAAAAGACCGACTGCTAATT TGTAAACATTGCAATTGGTCCTCCAGAGATTCAGCGCGCTATGGTTCCAC TTCAAATTTGTTGGTGCATCTCCAGACCAAGCATCGTATCAAGTCCGGGG ACGACTCCATCTTCTTGCCCGCGGTGGAGGGGAGTCTCGACCGGTTCTTG GAGTCCCCGAGAAAGAAGGCTGGTGTTGAAGAGATGCTAGTTCGGTGGGT CATTCAAACAAGACAGCCTTCTACAGTGGTAGAGCATCCGGCTTTCAGGG CACTCATTGAAGCAACGGGAGCCACGTTGCCCATCAAGACTGCTGATACT CTCTTCAACCGAATCAAGGAAGATTTCCAATCAAGTAGGGCTTCCGTGAA AGAGGAGCTTGCGAGGAGTAGCCGGACATTGGCTTTGTCCCTTGACGTTT GGACGTCGGAAAATCAGATTCCGATCATGGGTATCATTGGCCATTGGATC TCTCCCGAGTTTGACAAGCGCGATGAGCTTCTCGAGTTCACCGAAATCAA TGGACCACATTCTGGAGAGAATCTAGCGGATGTTGTGTTGAATATGCTTG ACGAACTGGACATCGCGCCAAAGCTCCTAACCATCACAGGGGACAATGCA GGCAATAATGGGACGCTCTGCGATAGCCTTCACGATCAGCTCCTCAAGAA GTATGATAATGACGACGACTGCTTTCGTATTAGGCCTCTCATGCGGTTCC GTGGACGGCAAAGCTTCATTCCCTGCCTCGCGCATATCCTCAATCTGATC TGTAGAGATGTGCTCGCTTCCTTAAGGGCTGGCTCGGCTCGGGAAGCAAA GGCGATACTGGACGACATGGCCATCCATTCTAGAGCAGCAGCATTCAACT CCCTTCACAGTACAAAAGGAGCTATCATGAAAGTCCGGCTCCTGACGCTA TGGATTGCCCGTAGCCCACAGCGCCGCCAAGATTGGAAAGAAGTGTCACC CGGCAAACAAGTTAGTTATGATGTTGACACGCGATGGAATTCGACTTATA TCATGATCCAGGATGCACTTCGGCTGCAAACTCAGCTCGGACAATTTACT CGGATACATCCAGAAGTTCAGGCTCTTCAGCTTACCGTTGACGAATGGTC GACACTTCAGCAAGTAGCTGAGATTCTTAAGCCGTTCTGGGATCACACAA ACTCCGTCTCAAAGACTTGCCCAACAATTGTTCAAAGTCTACCGATTTAC TGGAGCTTGGACGACTTGTTGAATGAGGTTCGAAATGCGGAGGGGGATTT TGAAGATGTGAGCGTTGAGATTCGCGATGCGGTGGAAGGAGGAATTCGAA AGATGAACAAATTTGCTAGAAAAATGGACGACAACCTTCTTTACTATGTG GCTTCGGTTCTTGATCCGCGAATCAAGTCGTCCTTGATTGTGTCTCAGAT GAGCGAACAGGATTCAGGGTTTATCATTTCTCAAGTGCGGGATTTCTTAA AAAAGGAGTACCCCCCAGAGCCATTGGTTTCCCGGGAAGTTGACCTACCA CGTCCACCGGGGATGTCAGAAACAATGTGGAGGACTCTGCGCAAAGTCCA GCCATCCAAAGAGGCTTCTTTGTCGGATATCGATAAGTATTTGGATTCCC CGCCGGTCAACTGGTCCCACCATATGATCGACGATGCAGACACAGAATGG GTCCTCAAATTGTGGAAGGCTAACGCGTTTAATTTTCCACTCCTGGCAAA AGCTGCTCGTGACTATCTCCCCATCCCTTCGGCAGAGGTCGGGATTGAAC GTGAGTTTAGCAGCGCTAGAGATGTCTTGGGTCTTCGAAGACACTGTCTG AACGCGGAGACTATGCGATGGTTGATGCTCTTGAGAGGGCAGTATCAGAC ATAAATGGGAATGTTTACAATCTTCCTATCCTCAATCCCCCTTTCAGTTT CTTACCTCAGCCCAGGTAGTTCAAGTAGCATGGCATCTACACCTGATCTG TTCATGCGGAGGACGCGCGGTCTTCCACGTCGGGATTATAATGCTCTGCA CAATGGCCTGATTTCTTCGCCTTCACAGCAGTCTGAGGGATCTACCTGTG AAACAGGACACCCTTCCTCTCCTGAGCCCTCTTCGCCTAGGGACCTGGAA AACACACCTCAATCGAAGCGGTCTTACTCTTTGCTTAGCTCCTCGCCTTC CCCGCTTGATCCTGCCTTTTCAGAGAGCAGGAGCGATGCGAGTAGTCCGC ACCCGTGTAAAAGACGAAAGCCCAAATCATATTCTAGTTGGACTATTGAG CACTTTTGGACTACAGATCTGGATAACACTTGGTGTCGGCAGGGTGGCCC TCCGAAAAAAGACCGACTGCTAATTTGTAAACATTGCAATTGGTCCTCCA GAGATTCAGCGCGCTATGGTTCCACTTCAAATTTGTTGGTGCATCTCCAG ACCAAGCATCGTATCAAGTCCGGGGACGACTCCATCTTCTTGCCCGCGGT GGAGGGGAGTCTCGACCGGTTCTTGGAGTCCCCGAGAAAGAAGGCTGGTG TTGAAGAGATGCTAGTTCGGTGGGTCATTCAAACAAGACAGCCTTCTACA GTGGTAGAGCATCCGGCTTTCAGGGCACTCATTGAAGCAACGGGAGCCAC GTTGCCCATCAAGACTGCTGATACTCTCTTCAACCGAATCAAGGAAGATT TCCAATCAAGTAGGGCTTCCGTGAAAGAGGAGCTTGCGAGGAGTAGCCGG ACATTGGCTTTGTCCCTTGACGTTTGGACGTCGGAAAATCAGATTCCGAT CATGGGTATCATTGGCCATTGGATCTCTCCCGAGTTTGACAAGCGCGATG AGCTTCTCGAGTTCACCGAAATCAATGGACCACATTCTGGAGAGAATCTA GCGGATGTTGTGTTGAATATGCTTGACGAACTGGACATCGCGCCAAAGCT CCTAACCATCACAGGGGACAATGCAGGCAATAATGGGACGCTCTGCGATA GCCTTCACGATCAGCTCCTCAAGAAGTATGATAATGACGACGACTGCTTT CGTATTAGGCCTCTCATGCGGTTCCGTGGACGGCAAAGCTTCATTCCCTG CCTCGCGCATATCCTCAATCTGATCTGTAGAGATGTGCTCGCTTCCTTAA GGGCTGGCTCGGCTCGGGAAGCAAAGGCGATACTGGACGACATGGCCATC CATTCTAGAGCAGCAGCATTCAACTCCCTTCACAGTACAAAAGGAGCTAT CATGAAAGTCCGGCTCCTGACGCTATGGATTGCCCGTAGCCCACAGCGCC GCCAAGATTGGAAAGAAGTGTCACCCGGCAAACAAGTTAGTTATGATGTT GACACGCGATGGAATTCGACTTATATCATGATCCAGGATGCACTTCGGCT GCAAACTCAGCTCGGACAATTTACTCGGATACATCCAGAAGTTCAGGCTC TTCAGCTTACCGTTGACGAATGGTCGACACTTCAGCAAGTAGCTGAGATT CTTAAGCCGTTCTGGGATCACACAAACTCCGTCTCAAAGACTTGCCCAAC AATTGTTCAAAGTCTACCGATTTACTGGAGCTTGGACGACTTGTTGAATG AGGTTCGAAATGCGGAGGGGGATTTTGAAGATGTGAGCGTTGAGATTCGC GATGCGGTGGAAGGAGGAATTCGAAAGATGAACAAATTTGCTAGAAAAAT GGACGACAACCTTCTTTACTATGTGGCTTCGGTTCTTGATCCGCGAATCA AGTCGTCCTTGATTGTGTCTCAGATGAGCGAACAGGATTCAGGGTTTATC ATTTCTCAAGTGCGGGATTTCTTAAAAAAGGAGTACCCCCCAGAGCCATT GGTTTCCCGGGAAGTTGACCTACCACGTCCACCGGGGATGTCAGAAACAA TGTGGAGGACTCTGCGCAAAGTCCAGCCATCCAAAGAGGCTTCTTTGTCG GATATCGATAAGTATTTGGATTCCCCGCCGGTCAACTGGTCCCACCATAT GATCGACGATGCAGACACAGAATGGGTCCTCAAATTGTGGAAGGCTAACG CGTTTAATTTTCCACTCCTGGCAAAAGCTGCTCGTGACTATCTCCCCATC CCTTCGGCAGAGGTCGGGATTGAACGTGAGTTTAGCAGCGCTAGAGATGT CTTGGGTCTTCGAAGACACTGTCTGAACGCGGAGACTATGCGATGGTTGA TGCTCTTGAGAGGGCAGTATCAGACATAAATGGGAATGTTTACAATCTTC CTATCCTCAATCCCCCTTTCAGTTTCTTACCTCAGCCCAGGTAGTTCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012963-T1.utr3p1 | KJC3_012963-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012963-T1.utr5p1 | KJC3_012963-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-16) |
DBxref | InterPro:IPR012337 |
DBxref | InterPro:IPR003656 |
DBxref | InterPro:IPR008906 |
DBxref | PFAM:PF02892 |
DBxref | PFAM:PF05699 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
JC14F | supercontig | JC14F:162169..164843 - |
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