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KJC3_012969-T1, KJC3_012969-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012969-T1
Unique NameKJC3_012969-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC15F:31082..32968+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012969-T1 ID=KJC3_012969-T1|Name=KJC3_012969-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1887bp|location=Sequence derived from alignment at JC15F:31082..32968+ (Aspergillus niger KJC3)
CAGCTTCGGCTGTGACTGGTACGTCTCTAGGTCGCAGGGATTCCCGGGTG
ACAGTAGGTCAAGTCCCACCCGCTATGACCTGATAGAATTCCACTATTTA
TATAGGACGAGCAAGCCATGGCTATAGCGTTAGTGGTCAAGTTAGAGTGA
AAGTCCTCTAATTCATGCCTGTCCTTTAAAAAGACCCGGGACTGCCATCG
CGGTCCATCCTAATATCAACTTGCGCTCGTTTACCGCCTCAGATTTTGGT
TACTGGCATTGGAATGATCGCCCTGCCATTTGAGGATGGCTCTACCCACT
CAGCCCTGTGGAAGCATGTCGAAAGCATCTGCAGCCACGACTAAACCAAC
TGAAATTGGGACCGAGGCGTCCGTGTTTCTCCAAGCCACACCAGGAGACC
CGATATCTGAGCCACCACCGCCATATCTCCAGTCTTGGTTCATGCCTGGT
ACCGGTTGTGAGGATCTCAGACAGCATCTCCCGTGCATCTCCGATGGTCT
CCCCCAAGGTTCTGGGAAACACGCCGTGGTAGGCGCGCACACCCATTTTC
GAACTAGAAGCTGCAAAAGTATCAAACTCTGACGATCCCAGAGCTTCGAT
CAGCCTGTCCATGTGCCAGAGATTGCGGTCAACAACTCATACCATTTGGT
CCCACAGCCGGTGAGAAGCGTTCCCCCTCCGCCTCACCTGGAAGCCAGGC
GTACCTACTGGCCTTCTGCTGATATCTCTAGATCTGTGGCGGAACCCAAG
TCCACGCGAACTCGCTGATCCCGGCAACAGGAACCGAGGCGGACCAGATG
AGATCAAAGCCTGTGTGCTGGAATCACAGACTCCAGCTGTCGAATCGCGC
CGTAGCCACGACAAGGAACAACCAAGTCGACCACGCAGTGATAAACAGCC
AAGATCTAGACCTGCCATGCCCGCTGAGTGCGCTGACCGACGGCATGCAG
CACATCCCGGTTAGAGACATGTACGCCTGGGTGGACCGCCCGGTCGAGAC
GCGCCGCCAGGAGGCACGGCAACGGCATAAAAGAATCCCACGCCCACTGA
ATTCATTCATACTGTACCGGCTGGCGTACAATGATCGAGTAAAATACTGG
CTCGGCCGGAATGACCATCAGACCATCTCCAGACTCAGCGGACAGAGCTG
GAAGATGGAAGCCCCTCACATTCGGAAGCAATACGAGACGCTCGCGGAGA
AGGAGAAATGGAACCATGCCAGGGCACATCCGGGATATCGCTTTTCGCCG
TCAAGCAAGCGGGGACAACCGCGGACCGCAAAAGGCCGTTCTCAGGAGTT
GGCGTTGCGTTCGAAGGCGCTCTCCAAACTTGGCCATAATCCACAGCCTA
CCGCTTGGTCCCCTTCGGCGGATAATGATCGCGCTAGTGAACGCTCAACA
GAAGCTTCTCCTGCGGAAGAGGGAACCCTCATCCACAGCGATTCCTTGAA
TCCAGATGGCTTTATACCACTGGGCAGTGCCGCCTCGGTATGGGAGCATT
GGATGTCCTATTCCCAGACGACCTCTGCCGATCATGGCTCCAAAGGCACC
CAGCCTTGTTTGCCTGTCGCCACGGGGCAAACAGAGATACCTGCCATTGC
TTGCTTTGTTCCCCAGCCTGCAGCCCCTGGAATCGATGCTGCCAATAGTC
GGTCTGCTTCACTGCCACTGTCTGTTCCGTATGAGATGTATAGTTTTTGT
GAGGAATGGCCTATCGAAGGAAAGTAGTTGGCTAGGACTGCAGGCTAGGA
GATAGAAGATATGATTTCGGCAGCGTTTTATATCATCATAACTCTCTCAT
TCGTGTGCGATTGCCTCGGACGCGAGGGTCTTGTACATAGCCATATCTAG
TTGTCTTGTATCGTTCATGTATGAGAAAGAAATCAGT
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Coding sequence (CDS) from alignment at JC15F:31082..32968+

>KJC3_012969-T1 ID=KJC3_012969-T1|Name=KJC3_012969-T1|organism=Aspergillus niger KJC3|type=CDS|length=930bp|location=Sequence derived from alignment at JC15F:31082..32968+ (Aspergillus niger KJC3)
ATGAGATCAAAGCCTGTGTGCTGGAATCACAGACTCCAGCTGTCGAATCG
CGCCGTAGCCACGACAAGGAACAACCAAGTCGACCACGCAGTGATAAACA
GCCAAGATCTAGACCTGCCATGCCCGCTGAGTGCGCTGACCGACGGCATG
CAGCACATCCCGGTTAGAGACATGTACGCCTGGGTGGACCGCCCGGTCGA
GACGCGCCGCCAGGAGGCACGGCAACGGCATAAAAGAATCCCACGCCCAC
TGAATTCATTCATACTGTACCGGCTGGCGTACAATGATCGAGTAAAATAC
TGGCTCGGCCGGAATGACCATCAGACCATCTCCAGACTCAGCGGACAGAG
CTGGAAGATGGAAGCCCCTCACATTCGGAAGCAATACGAGACGCTCGCGG
AGAAGGAGAAATGGAACCATGCCAGGGCACATCCGGGATATCGCTTTTCG
CCGTCAAGCAAGCGGGGACAACCGCGGACCGCAAAAGGCCGTTCTCAGGA
GTTGGCGTTGCGTTCGAAGGCGCTCTCCAAACTTGGCCATAATCCACAGC
CTACCGCTTGGTCCCCTTCGGCGGATAATGATCGCGCTAGTGAACGCTCA
ACAGAAGCTTCTCCTGCGGAAGAGGGAACCCTCATCCACAGCGATTCCTT
GAATCCAGATGGCTTTATACCACTGGGCAGTGCCGCCTCGGTATGGGAGC
ATTGGATGTCCTATTCCCAGACGACCTCTGCCGATCATGGCTCCAAAGGC
ACCCAGCCTTGTTTGCCTGTCGCCACGGGGCAAACAGAGATACCTGCCAT
TGCTTGCTTTGTTCCCCAGCCTGCAGCCCCTGGAATCGATGCTGCCAATA
GTCGGTCTGCTTCACTGCCACTGTCTGTTCCGTATGAGATGTATAGTTTT
TGTGAGGAATGGCCTATCGAAGGAAAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012969KJC3_012969Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012969-T1KJC3_012969-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012969-T1.utr5p1KJC3_012969-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012969-T1.utr5p2KJC3_012969-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012969-T1.utr5p3KJC3_012969-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012969-T1.exon1KJC3_012969-T1.exon1Aspergillus niger KJC3exon
KJC3_012969-T1.exon2KJC3_012969-T1.exon2Aspergillus niger KJC3exon
KJC3_012969-T1.exon3KJC3_012969-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012969-T1.cdsKJC3_012969-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012969-T1.utr3p1KJC3_012969-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036910
DBxrefInterPro:IPR009071
DBxrefPFAM:PF00505
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC15FsupercontigJC15F:31082..32968 +
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