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KJC3_012972-T1, KJC3_012972-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012972-T1
Unique NameKJC3_012972-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC15F:176998..178950-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012972-T1 ID=KJC3_012972-T1|Name=KJC3_012972-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1953bp|location=Sequence derived from alignment at JC15F:176998..178950- (Aspergillus niger KJC3)
GTCACAAATGACCTCCGAGCACCAGCGGGCAATTCTGTGTCAGCCGAACT
CAACGCAACCCTACCTGGTCATCATCGTAAAGCTCATCACAAGAGCTAGA
ACGGTACAGTACTGTAGTCTTGTCGGATGATTTGCCCGTTTCTCACCCAT
CGGCTCCCGGATCCCTGGATTCTGATTTTGCCCAGGTGTCGCTGGGCTGC
CTCATCGTTGCGAGATCTCCGCCCCAAGCAGTGACAAGACGGGCAATCTC
CGAGGCCCTGTGATGCATGACCCGTCACCAAGGTCGATATCTGACGAGCG
GACCATCTGAAGGCGTTCGAACGCGTCTGAATGTAGAGTACAGTATGCAA
CAAGCAATCGATTTGCCAGACATACACCGACTCGCAGACTGCTTGTCCGA
AGCGAACCGGAGGGAATTACCCAGGACTCGCGACGTCGTCTGCGTCATTG
TTCAGGACCAGGATATACTACAGATGGAACCGAATCCGAGTGAATACTGT
ATACATTGTATTACAACATCTAAGCTAACTATTGTACATGACTGGCAGCG
GGCATTGACGGATACGGACCTCCGTTCCATACGGGCCTCCATTCTGCCTG
TGATGCACGATGTTGCACCGATGCCGGTAAGAACCGACGGCATGGCGCGA
GCAGATCTTGGCTTCCTTGCGTCATGACGAGTGGATATACTCTGGCAAGT
ACTAGTCCCCAGCACCGCGTAGAGGTGGCTGCCCATAGCTGGGGTGTCTC
AGAACAGGGTCCTAAGAACAGAAAAGACCTGTTCATCTGGGAACGGTCCA
GGGCACAGGTGATACGACATGGGGCCCATGGCCATGAAGGGGATATCTCC
GGAGAGATTGATACTCAACAGGCCCACCACTCCTGTCAGGGGATATCTCC
GGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGGGTTATCTC
CGGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGGGATATCT
CCGGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGGGATATC
TCCGGAGGAGATCGTACGACACAGGCCCGCCATTCCTGTGAAGGTGCACA
CTGTTGCGCTTGCGCATTCCAGTGAGTGAGGACAGGAAGCCTGGTTCTGG
AGCGAACAAGACTGGGAGACGCCGGCCTTATATCTCCAAGCGCTCCGGTC
GCCCGGCAAGACCAACCGTGCAGCATTAGCATCCAGCCTCGCCGACTTCA
AGTACCAGAACCGTCATGCGCTCGAGATGAACTTCAATGGTCGTTAAAGT
GCGGGGTGGGTATCTGGTCATCTCTGCGTGTGCTCCCTCCTACCAAATGC
CCAGGGGCATATGCTGACCTTAAACGAAGAGCAAAACCCGAAGCCACCTC
CCCAAATGACCATGCAGGCCTCGGTTCAAGACGCCATCTGGGGGAAAAGG
ATCGGCGTGGGCATGGGCAGGGCGAAGATGTGTGCGACTCATGGGACCGC
GCCGTTGGTCAATAGGCGTCTCAAGTACACAACGATACTTGGGAAACGGT
TCCAGATCTGACCAGTAGGCTCAGTGGAGACCACTTGGAAACAGTTGGGC
AACCGTGGTCCGACAGAGCACAATGACTACCGATTCCTCCATTTGTCGTA
GTACTTTCCAGTTTCTAGAGCACCGCTGCCCAGTACCCGACCGCTGTCGA
CTCGGGTAATCCACTAAGACGTCATTTTCCGCGTAATGCACTAGAAGCTG
CCGAAAATTCACCTTGGGAAGCTTCTCGTCCTCCCGACCTTCCGAACGGA
CAATGCCGCCTTTGAAACTCAATGGGACAAACTGGGATCATCGACTACCA
CTAAAATTTGAATTCCATTACTTTGTATCGGCCTTTTTCATCAGGCCCAC
GTCTTATTCTCAAAATAGGCAGAAGAGAGAGACCCTTGATGAGAGAAAAA
TTC
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Coding sequence (CDS) from alignment at JC15F:176998..178950-

>KJC3_012972-T1 ID=KJC3_012972-T1|Name=KJC3_012972-T1|organism=Aspergillus niger KJC3|type=CDS|length=1608bp|location=Sequence derived from alignment at JC15F:176998..178950- (Aspergillus niger KJC3)
CGGGCATTGACGGATACGGACCTCCGTTCCATACGGGCCTCCATTCTGCC
TGTGATGCACGATGTTGCACCGATGCCGGTAAGAACCGACGGCATGGCGC
GAGCAGATCTTGGCTTCCTTGCGTCATGACGAGTGGATATACTCTGGCAA
GTACTAGTCCCCAGCACCGCGTAGAGGTGGCTGCCCATAGCTGGGGTGTC
TCAGAACAGGGTCCTAAGAACAGAAAAGACCTGTTCATCTGGGAACGGTC
CAGGGCACAGGTGATACGACATGGGGCCCATGGCCATGAAGGGGATATCT
CCGGAGAGATTGATACTCAACAGGCCCACCACTCCTGTCAGGGGATATCT
CCGGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGGGTTATC
TCCGGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGGGATAT
CTCCGGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGGGATA
TCTCCGGAGGAGATCGTACGACACAGGCCCGCCATTCCTGTGAAGGTGCA
CACTGTTGCGCTTGCGCATTCCAGTGAGTGAATGACCCGTCACCAAGGTC
GATATCTGACGAGCGGACCATCTGAAGGCGTTCGAACGCGTCTGAATGTA
GAGTACAGTATGCAACAAGCAATCGATTTGCCAGACATACACCGACTCGC
AGACTGCTTGTCCGAAGCGAACCGGAGGGAATTACCCAGGACTCGCGACG
TCGTCTGCGTCATTGTTCAGGACCAGGATATACTACAGATGGAACCGAAT
CCGACGGGCATTGACGGATACGGACCTCCGTTCCATACGGGCCTCCATTC
TGCCTGTGATGCACGATGTTGCACCGATGCCGGTAAGAACCGACGGCATG
GCGCGAGCAGATCTTGGCTTCCTTGCGTCATGACGAGTGGATATACTCTG
GCAAGTACTAGTCCCCAGCACCGCGTAGAGGTGGCTGCCCATAGCTGGGG
TGTCTCAGAACAGGGTCCTAAGAACAGAAAAGACCTGTTCATCTGGGAAC
GGTCCAGGGCACAGGTGATACGACATGGGGCCCATGGCCATGAAGGGGAT
ATCTCCGGAGAGATTGATACTCAACAGGCCCACCACTCCTGTCAGGGGAT
ATCTCCGGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGGGT
TATCTCCGGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGGG
ATATCTCCGGAGGAGAATGATACTAAACAGGCCCACCACTCCTGTCAGGG
GATATCTCCGGAGGAGATCGTACGACACAGGCCCGCCATTCCTGTGAAGG
TGCACACTGTTGCGCTTGCGCATTCCAGTGAGTGAATGACCCGTCACCAA
GGTCGATATCTGACGAGCGGACCATCTGAAGGCGTTCGAACGCGTCTGAA
TGTAGAGTACAGTATGCAACAAGCAATCGATTTGCCAGACATACACCGAC
TCGCAGACTGCTTGTCCGAAGCGAACCGGAGGGAATTACCCAGGACTCGC
GACGTCGTCTGCGTCATTGTTCAGGACCAGGATATACTACAGATGGAACC
GAATCCGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012972KJC3_012972Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012972-T1KJC3_012972-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012972-T1.cdsKJC3_012972-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012972-T1.utr3p2KJC3_012972-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_012972-T1.utr3p1KJC3_012972-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012972-T1.exon3KJC3_012972-T1.exon3Aspergillus niger KJC3exon
KJC3_012972-T1.exon2KJC3_012972-T1.exon2Aspergillus niger KJC3exon
KJC3_012972-T1.exon1KJC3_012972-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012972-T1.utr5p1KJC3_012972-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC15FsupercontigJC15F:176998..178950 -
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