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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC15F:249291..250901+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012975-T1 ID=KJC3_012975-T1|Name=KJC3_012975-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1611bp|location=Sequence derived from alignment at JC15F:249291..250901+ (Aspergillus niger KJC3)
CGCCTTGCATACACTACCAAGATCCTTGTGCTTGTTACGGTGGCGTCGCT
CGTTCAGGTAAAACGGCCACCGCCTACCCCTACTGATTATCGTATCAGTG
TTTAATTGAATCATTAGGTGTTCCTCACGGTCTTGATGTGGCTCATCTCT
CGCAAATGGCACAGCACTTGGGGGATTCCAGGCACCGAGGTCCATGGAAC
CGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTAAGAAG
GCCTCCGACATACGCCCGGCGCATATACGACGAGAAGTGCGTGCTAACCG
ATATGCAGGTGGCCTGGCGTGTTCGGACAGTTCTTCTGGTCCTGGATTGT
GGGCCCCGTCGTTCTCCGGAAATCCCGTCACATCCACGACACCCACGGCT
GGCGAGTCCAGACAATGGGCTGCGTCATCGCCAAGTGAGTCAATCGGTCT
GATGAGGTCTGTCGTACGACTAACCCGTCCTGTAGTCTCCCGGCGACGCC
GATGTGGCTCATCGCCCTCTATGTCCCCGCCATGGAGCGAGTCAATCAGT
ACTGGCTACCGCCCCAGTGGTAGGTGCTCCGAGCCGTGACCAACAGGAAC
ATAGAAATAAAGATGGAAAGAAGCACGAAAATGTGGCTGACACCTGTAGG
ATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTG
CAGGGAGGTAATGCGCTATCACGCTATCCGACAAGGGGCCTTCGATTCGA
TCGCACGGTGGGAACCAAATACCAATCTCTTTGCCGGTAGCACCATGGCC
CGCAGGTCCGCCTCCATTCTCGTCGAGCTCACAGGGTCTGGCCGGCAATC
ATGGAGTAGATCTCTTGGCTCCAGCTCCAGCTCTCGGGACAGCATATTCA
CCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCCGCCCCGCTGCAG
GATTTTTCCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTTCTGAC
CCGAGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCA
GGATCTCAGACTATGGAGACCTTACCGACTTGATTCGGGAGCAGTTTCAC
CGCGCGCTGTGTATTTACACGACGTTCATCAGTGATCGCCATGCGCACTT
TCCGATCAACATCTCTTCGCAGGACCGGAAGGAGCTGGAGAAGGTCTTCG
CGGGCCCTGCTGGGCTTCTCTTCGGGGACGGGCGCCCGGCCAATCCCGCC
GTTCCCTTCGATGCGCCAGGGTATCCCCCCACACCCTTAGCGTCTCCGAT
CGCCTCCATGAAGGCCGAAGCTGGTTCTCTAGTCGCCGACAACCGCCCGG
TGCAATCCTGGGGCGAGATTCCCCAGACATTCAGTGCGACAGTCTTTGAC
CGAGCCGAGGAGAGCATCAAGTACCTCGTCCTGACCAACACGTGGCCTAA
GTTTGTTCGAAGTTGCGGCATCGCAGCTGAGGTTGATTTGCTGGCAGGGA
GCTAGGGTCCCGCGTAGCTGGTTCCGGAACGAGGTCGCCAGCGATGGAAG
ATTGGACTGCATGGCATCTGTCCGGGATGTCGACAAACTTCTATAGATTA
ATATGGCGGAG back to topCoding sequence (CDS) from alignment at JC15F:249291..250901+ >KJC3_012975-T1 ID=KJC3_012975-T1|Name=KJC3_012975-T1|organism=Aspergillus niger KJC3|type=CDS|length=2598bp|location=Sequence derived from alignment at JC15F:249291..250901+ (Aspergillus niger KJC3)
ATGGCACAGCACTTGGGGGATTCCAGGCACCGAGGTCCATGGAACCGAGA
TGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTAAGAAGGCCTC
CGACATACGCCCGGCGCATATACGACGAGAAGTGCGTGCTAACCGATATG
CAGGTGGCCTGGCGTGTTCGGACAGTTCTTCTGGTCCTGGATTGTGGGCC
CCGTCGTTCTCCGGAAATCCCGTCACATCCACGACACCCACGGCTGGCGA
GTCCAGACAATGGGCTGCGTCATCGCCAATCTCCCGGCGACGCCGATGTG
GCTCATCGCCCTCTATGTCCCCGCCATGGAGCGAGTCAATCAGTACTGGC
TACCGCCCCAGTGGTAGGTGCTCCGAGCCGTGACCAACAGGAACATAGAA
ATAAAGATGGAAAGAAGCACGAAAATGTGGCTGACACCTGTAGGATTTGT
CTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCAGGGA
GGTAATGCGCTATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCAC
GGTGGGAACCAAATACCAATCTCTTTGCCGGTAGCACCATGGCCCGCAGG
TCCGCCTCCATTCTCGTCGAGCTCACAGGGTCTGGCCGGCAATCATGGAG
TAGATCTCTTGGCTCCAGCTCCAGCTCTCGGGACAGCATATTCACCAAGC
GTGCGCTTGAATGTGTCTTGGCGCGCAATCCCGCCCCGCTGCAGGATTTT
TCCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTTCTGACCCGAGT
GGCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGGATCT
CAGACTATGGAGACCTTACCGACTTGATTCGGGAGCAGTTTCACCGCGCG
CTGTGTATTTACACGACGTTCATCAGTGATCGCCATGCGCACTTTCCGAT
CAACATCTCTTCGCAGGACCGGAAGGAGCTGGAGAAGGTCTTCGCGGGCC
CTGCTGGGCTTCTCTTCGGGGACGGGCGCCCGGCCAATCCCGCCGTTCCC
TTCGATGCGCCAGGGTATCCCCCCACACCCTTAGCGTCTCCGATCGCCTC
CATGAAGGCCGAAGCTGGTTCTCTAGTCGCCGACAACCGCCCGGTGCAAT
CCTGGGGCGAGATTCCCCAGACATTCAGTGCGACAGTCTTTGACCGAGCC
GAGGAGAGCATCAAGTACCTCGTCCTGACCAACACGTGGCCTAAGTTTGT
TCGAAGTTGCGGCATCGCAGCTGAGGTTGATTTGCTGGCAGGGAGCTAGA
TGGCACAGCACTTGGGGGATTCCAGGCACCGAGGTCCATGGAACCGAGAT
GCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTAAGAAGGCCTCC
GACATACGCCCGGCGCATATACGACGAGAAGTGCGTGCTAACCGATATGC
AGGTGGCCTGGCGTGTTCGGACAGTTCTTCTGGTCCTGGATTGTGGGCCC
CGTCGTTCTCCGGAAATCCCGTCACATCCACGACACCCACGGCTGGCGAG
TCCAGACAATGGGCTGCGTCATCGCCAATCTCCCGGCGACGCCGATGTGG
CTCATCGCCCTCTATGTCCCCGCCATGGAGCGAGTCAATCAGTACTGGCT
ACCGCCCCAGTGGTAGGTGCTCCGAGCCGTGACCAACAGGAACATAGAAA
TAAAGATGGAAAGAAGCACGAAAATGTGGCTGACACCTGTAGGATTTGTC
TCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCAGGGAG
GTAATGCGCTATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACG
GTGGGAACCAAATACCAATCTCTTTGCCGGTAGCACCATGGCCCGCAGGT
CCGCCTCCATTCTCGTCGAGCTCACAGGGTCTGGCCGGCAATCATGGAGT
AGATCTCTTGGCTCCAGCTCCAGCTCTCGGGACAGCATATTCACCAAGCG
TGCGCTTGAATGTGTCTTGGCGCGCAATCCCGCCCCGCTGCAGGATTTTT
CCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTTCTGACCCGAGTG
GCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGGATCTC
AGACTATGGAGACCTTACCGACTTGATTCGGGAGCAGTTTCACCGCGCGC
TGTGTATTTACACGACGTTCATCAGTGATCGCCATGCGCACTTTCCGATC
AACATCTCTTCGCAGGACCGGAAGGAGCTGGAGAAGGTCTTCGCGGGCCC
TGCTGGGCTTCTCTTCGGGGACGGGCGCCCGGCCAATCCCGCCGTTCCCT
TCGATGCGCCAGGGTATCCCCCCACACCCTTAGCGTCTCCGATCGCCTCC
ATGAAGGCCGAAGCTGGTTCTCTAGTCGCCGACAACCGCCCGGTGCAATC
CTGGGGCGAGATTCCCCAGACATTCAGTGCGACAGTCTTTGACCGAGCCG
AGGAGAGCATCAAGTACCTCGTCCTGACCAACACGTGGCCTAAGTTTGTT
CGAAGTTGCGGCATCGCAGCTGAGGTTGATTTGCTGGCAGGGAGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012975-T1.utr5p1 | KJC3_012975-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012975-T1.utr3p1 | KJC3_012975-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036305 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC15F | supercontig | JC15F:249291..250901 + |
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