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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC15F:260502..263246+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012976-T1 ID=KJC3_012976-T1|Name=KJC3_012976-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2745bp|location=Sequence derived from alignment at JC15F:260502..263246+ (Aspergillus niger KJC3)
GGTCCGTGGATTTGTGTTTGGGGCCTAGTCTGCTGACTTCCTCATGGCTC
AACTATAACGAGGGGAGATAAGCTATTCAGCGTTAGGCTGCGCTCGGTAC
GACGTTGTTCTTTAAATATCAATAGCCAGGTCGCCATGATTCCCAGGATT
GTCATCAAGCATGCGGCCAACACACCAAGCTCGCATCGAAACCGAGGAGA
AGGCATTGGAAGCCTACCGCCAGGAGCGCTACCAGGGTAGCGCCCGAGTC
CGCCTGGATTGTCTGACATTCGAGAATGGCTTTGGCCGCTTGATGGACGA
CGGCCGAAATGCCCTCCGAATGGAGCAGATCCTTGAGATACAAGGGTGCC
TCCGTATCAATCGAGAGTACCATGTGCCCGTCTTGGTCCAAGCCACGGAC
TGGGGCTCCCACATCAGGCTATTGCCGTGCGACACGGAGCCGTTTCCCGA
GCTGATCGTGCCCTTGAACATGTCGCTGCGCGCCTTAGGCCACGAGAATG
TCATCGCCGCAGCGCGAAAAAAGCTCTACGGCGAGAACCGATGGTGGGTG
GTCGATGTGTATGTGGAGGATCCTAGTAAGTTGTCTTTGAAGTCATTTCG
AGTCTCAGCGTGTGTGCCCCTCCCCGTTCACCTGCTAAGTGTGAGTCGCC
AGATGAGCAACCACAAAGACAAACTCTCAATTACCATCTCGTCCGCTCGC
TCCGAGAGCATTTTCCAAACCAACGCCGACCGCCGGACGGATTGATCTAC
GAAAGAATTCGGTTTTATCAAGGAAAGCTGGGCCATCCACCGGACGAAAA
TGCCGAGGCGGTATGGTGGGCCGTCCTCCGACACGACCCCAAGAGTAAGA
AGCATGTATATCTCCGGGCCTTTCTCCAACATCCCAGTTTCCCACCAGCA
TTTGATGCCCTGCTCCTTATTCCGGGGCTTTGGGCCAAAATGCAACTGGG
CGTGCTGCATACCATGGTGTCACTGCGATGTGACGAGGTGAGTGGCCCAA
GTGTCTACGAAATGAAAGACTCTTCTAAGGAACCCGTTATCTCTAGCCCA
TCCTGTCCTACCTCGAAGCCATCCGCACTGTCTGGATGGATCGTATTTTC
GACGGGAGCAACACCCTTCCTGTTCACGCAGACGCGGAGACCGTTCTCGC
GCTGGAATCTCAAGTCCCAAAGCTCTCGGAACCGGACAGGGAATATCTGC
GATCTCGGATGATGGACGACCGGACGTTGTTTCCATCGATCGACGACTCC
GACACACGGGCGGCATTGTGGGAGCGACTGAAGCAGATCGATACCCCTAT
TCCCACCCTAGGGACGTTCTTCCAGGACCTCCGTTTCTTAGGTGTTGCCA
GCAAGGTGATGAAGGCTCTTCTTCTTCCACCAGAGGACCTGGGCTCGAAG
AAGACCAAGAAGATCACTATCGACTGTGAACTCGGTACGCAGCATCGGAC
CGATGGCAGCGTGTCATTAAGAGAGACAAGACTGCAAGTACGGCGGGGAT
TGCACGAGCTCTGGCGCTTCAGCTTCCAATACGGGCTGGACATGACCGAG
ATTGCACGTCGTCAGCCGCATAAGAGGAAGAAAGCGTGTAGCTCCTATCC
TGTCCCGAATTGCTCGACATCGGTTGACCGAATGGCGTTGTGGCGCCACT
TCTTCTGGCTGGCTGACCAACACGGATTTCGGATCCCGGCCATAGCCGAG
TTTGTGCCCGGACAAGCGTCCCTGCCCACTCCGCAAACTCCGGAGGGCCT
TGGCAGCACCGAACAGGATGAAGCAGTGAATCGACGTTGCGGTATCCCAT
ACGCTGATACGGTCGATGCGGATCGCTTCGCCCTGGAAGGGAATAGACTG
TGGCAGCCCTGGGAGTCCCCACACGTTACAGCCGTGTTCTTCCGACGGTC
ACAGTTTCAGATCTTCTTCCGCTACCTTTGGGATGGAACTGGAATCAATC
AGGCCACGAACGCCGCCCGCGAATCTGCAGCGACCGATGGAACCGCAGCG
GTAGATCAAGAGATGTTGAATGACGAGTTGGAGCATCGCATGCCATCGCC
AAGTTTCTCTCAGATTCTACAAATAAGCAGTCCGATCGACTGGTCTATGG
CAATGTGGGACTGCGGAATGGGATCACTTGAAATGCCTATAGGCAATCTG
GAGGTGGTTGTGACCATCCCGAATCACAACCCAAGACGAATTTCGCTGCC
ATGTGACGAAATGATCATCAACAACTTTTTCAATGGACTGAAAGAGCGTA
GATTTGTTATCCACAGCCTGGATTACCACACGGTGTCCGCAGAGCCAAGT
CTTTATCTCTGGCATCTGAGGTACCCATGGGAAAGAGTTCAGGCCATATT
GACCGAGGAGAATGTGCAGGAGTATACGGCATCCGACGGAAATCGACTTA
AAAGGAGACGAAGAGAGATCGCTGAGGCAATAGATAACACTGCTGCGTGG
GTGGACGAGCAAATTCATAAGCTATCTGTTCCCGCTCCCCCCTCTTGGGA
ATGGAATGTACAAGAGGAGGAGTATTGATCAGAATAGAAAAGATTTGATA
TTTTCGATTGACAGAGATTTTATCATCGTGACAAGAAAAACATGCTGGAT
CTTCTGTTGTATGGTATCAATACAGCCCGAAGCAAATGGCTCATTGGTAA
TATAGTATTCTACCCTATTGCGGGAGCTATGCTTGGAGACTGGTACAGGG
GCATGGATCACGGGGCATGGCGCACAATGAAGTCGTCTGGCAGAA back to topCoding sequence (CDS) from alignment at JC15F:260502..263246+ >KJC3_012976-T1 ID=KJC3_012976-T1|Name=KJC3_012976-T1|organism=Aspergillus niger KJC3|type=CDS|length=1443bp|location=Sequence derived from alignment at JC15F:260502..263246+ (Aspergillus niger KJC3)
ATGGATCGTATTTTCGACGGGAGCAACACCCTTCCTGTTCACGCAGACGC
GGAGACCGTTCTCGCGCTGGAATCTCAAGTCCCAAAGCTCTCGGAACCGG
ACAGGGAATATCTGCGATCTCGGATGATGGACGACCGGACGTTGTTTCCA
TCGATCGACGACTCCGACACACGGGCGGCATTGTGGGAGCGACTGAAGCA
GATCGATACCCCTATTCCCACCCTAGGGACGTTCTTCCAGGACCTCCGTT
TCTTAGGTGTTGCCAGCAAGGTGATGAAGGCTCTTCTTCTTCCACCAGAG
GACCTGGGCTCGAAGAAGACCAAGAAGATCACTATCGACTGTGAACTCGG
TACGCAGCATCGGACCGATGGCAGCGTGTCATTAAGAGAGACAAGACTGC
AAGTACGGCGGGGATTGCACGAGCTCTGGCGCTTCAGCTTCCAATACGGG
CTGGACATGACCGAGATTGCACGTCGTCAGCCGCATAAGAGGAAGAAAGC
GTGTAGCTCCTATCCTGTCCCGAATTGCTCGACATCGGTTGACCGAATGG
CGTTGTGGCGCCACTTCTTCTGGCTGGCTGACCAACACGGATTTCGGATC
CCGGCCATAGCCGAGTTTGTGCCCGGACAAGCGTCCCTGCCCACTCCGCA
AACTCCGGAGGGCCTTGGCAGCACCGAACAGGATGAAGCAGTGAATCGAC
GTTGCGGTATCCCATACGCTGATACGGTCGATGCGGATCGCTTCGCCCTG
GAAGGGAATAGACTGTGGCAGCCCTGGGAGTCCCCACACGTTACAGCCGT
GTTCTTCCGACGGTCACAGTTTCAGATCTTCTTCCGCTACCTTTGGGATG
GAACTGGAATCAATCAGGCCACGAACGCCGCCCGCGAATCTGCAGCGACC
GATGGAACCGCAGCGGTAGATCAAGAGATGTTGAATGACGAGTTGGAGCA
TCGCATGCCATCGCCAAGTTTCTCTCAGATTCTACAAATAAGCAGTCCGA
TCGACTGGTCTATGGCAATGTGGGACTGCGGAATGGGATCACTTGAAATG
CCTATAGGCAATCTGGAGGTGGTTGTGACCATCCCGAATCACAACCCAAG
ACGAATTTCGCTGCCATGTGACGAAATGATCATCAACAACTTTTTCAATG
GACTGAAAGAGCGTAGATTTGTTATCCACAGCCTGGATTACCACACGGTG
TCCGCAGAGCCAAGTCTTTATCTCTGGCATCTGAGGTACCCATGGGAAAG
AGTTCAGGCCATATTGACCGAGGAGAATGTGCAGGAGTATACGGCATCCG
ACGGAAATCGACTTAAAAGGAGACGAAGAGAGATCGCTGAGGCAATAGAT
AACACTGCTGCGTGGGTGGACGAGCAAATTCATAAGCTATCTGTTCCCGC
TCCCCCCTCTTGGGAATGGAATGTACAAGAGGAGGAGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012976-T1.utr5p1 | KJC3_012976-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012976-T1.utr3p1 | KJC3_012976-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022198 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC15F | supercontig | JC15F:260502..263246 + |
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