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KJC3_012977-T1, KJC3_012977-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012977-T1
Unique NameKJC3_012977-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC16F:21122..23379-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012977-T1 ID=KJC3_012977-T1|Name=KJC3_012977-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2258bp|location=Sequence derived from alignment at JC16F:21122..23379- (Aspergillus niger KJC3)
ATTGATGCCATCGCTGATGTGGTACTGTAGATATACTATCTGGGTTTGGC
CAACTGCTAACTGCATGCCAGCTGCCACAGCACAGCGTTCGGTCCTTGAG
TTTGGTTTCCACCAGATTATATGCCGCCCTGTTCCCGCGGCTTCATCGAA
CCATCACCTTCCGTGCGAGAAATGAATGGGCTTTGAACATTTTCGATGTC
CATCCCTTTTTTCGGGACCACTCCGGCTCCCGCGCCGGCGAAATCCTCCA
GCATGCCCGGCAGATAAGGTTCAGCGCTCCTATTCACATTGCTAGGTTCC
ACCGTTGTGTATACAACAGTCACTTTTTCCTACCGACCTCGTCCCACAAC
CGACCTACACTTGGAAGCCCGCACGAGTCGACAGCCCATCAAGCCTTTCT
CAATGATTTGTCTTATCAGATAGATCAGGTCTTTGCGGGACTGGAGACCG
TCTCCATCCGCTCGTTTCAGTATGTATGAAAGGCATGAGCCGCTGGACTT
GCAACTGACCTGTCGCATGTGGTGCGTAAGGACCTGCCTTCCAGCCGGAA
TTCTGGACACCAACGGATACCTGGTCCGCCACCAGCAACGGATCCATTCG
CTTTGCTTGATCACCGACGGCACCTGTCCTCATGCCGGCCGTCGTCTAGA
GGGCCTGTCGAGTTTGACGGCACTGACTGACCTGGAATGGGAAGGCATCC
AGCATCCATTCGAAATGCGCACCTTGTGCGAGTGTCTCCGACAAAATCAT
CGGCGGCTGAAGGCGGTATCCATTGGACTTCTGTTGGATCCGAACGTACC
CACATCCCATGAGGATATTCTGGAGGTCTTCTGGCCACCTCGAGCGCAGG
ACGACTGCACGCCGGGCGAGCGGGAATGGTTCCCATCTCTCACATCCTTG
ACATTCTCTCGCGTCCCGTTCCCCGACAGTCTGCTGCCGGGCGGCCAACC
GTCACCGTTCCGCGCGCTCAAGGCACTAACGATCCGAGACTGTCCCAACG
AGCAGCGCTTCCTGCAGCTGTTGGCGCGAGCCAAGGATCCGTTGACCCTC
CAGCACTTCGAGATCTGCAGTGACTACCTGCGCGATTCAGAGGACCGATT
GGCGTCCATTGCGATCGTCGAATTTCTACTCTCATTTCGTGGCTTGCGAC
GGCTGTACCTGAAGGTGGCCAACTTTCCCCGGTTCCTGCCGGGTCTTGGT
GATGCCATCAAACATCACCAAGCCACGCTCCACGGTCTGGTTTTTCACGA
GCGTCGGCTGATGCCAATCGACGCTGAAAGGCTGTTTGAAGATCTTCGGG
ATGTGAATATGGCATCCCCCAATATTCCGCAAATTCTACGACATAGTTCC
CCCGCCGCTCTTGGCCTCTGTCTTCGCCCGGCCAGCGCGGTAAGTGTATC
GTTAGCACCCATCCCCACGGCTATATGAGCTGACTCACTGTAGCGCGGTC
TTCTCTCAGACATCCCGGAACGCTCGACAATAAGATTACTCCACCTCCGG
TTAAGCGGAGAGGAGAGGAACCATCGGCATCTCCGCAGAGAGATCGTCTC
AGAGCTGCGGAGAAATGCGGAAGGGAGGCTATGGTCCAGGTCGAGACATG
GACCAACAGTCGCGGGCCTCCACCTCAAGCCCGCTCGGAAACGGTCGGAA
GCCCAAGATTTCCTCCTGCTTGCTCAGTGGGCTTTTTTTGGACCTACGGG
GCTTCCTGCCTTGCAGATACTCGCCTTCGGTGACTTTTCGCACGATGGCC
GCTATAGAGAACAACAGATCTTGATCCGGCGGAGGAGGATCGGTGAGCAG
CCTTACCCGAGAGTTTCATCGGACGGGGAATACAGCATAAGCTCATCGTT
TTGCCTGGTCGATAGCGACGACCATTCTCTCTGGGACGGCCTGCCATTGG
ATGGGACTCAGTTTCTGTCTGCATGTCCTGGCACGGGGTTGATGGAGTCC
CCCTACGACCTTTAGCATGGTATCTTTGGAGTTCCTTATATTTGGCGTTT
TCAGATTCGCGCGTTGCAAGGGCGGCAATCTGTTGTAGATTGCGCTTTTG
ATATAATCGCCGCCGAAACATGCCTTTGGCAGTTGTTACTTACTAGTTGT
GCGCCGACAGCGCCATTGTGGGAGGCTAGGGGGCGCGATCCTGCTTGCTT
TATCTCTCGCCGCCTGCTGCCTGGGCTGGGAAGGCTTCCAGCACTGCTAA
CGGTTGGCTATACTGGGATTTTCCGTAACAGTAGGCTCTCCTTTCTAGGG
ACGCAGAC
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Coding sequence (CDS) from alignment at JC16F:21122..23379-

>KJC3_012977-T1 ID=KJC3_012977-T1|Name=KJC3_012977-T1|organism=Aspergillus niger KJC3|type=CDS|length=957bp|location=Sequence derived from alignment at JC16F:21122..23379- (Aspergillus niger KJC3)
ATGTATGAAAGGCATGAGCCGCTGGACTTGCAACTGACCTGTCGCATGTG
GTGCGTAAGGACCTGCCTTCCAGCCGGAATTCTGGACACCAACGGATACC
TGGTCCGCCACCAGCAACGGATCCATTCGCTTTGCTTGATCACCGACGGC
ACCTGTCCTCATGCCGGCCGTCGTCTAGAGGGCCTGTCGAGTTTGACGGC
ACTGACTGACCTGGAATGGGAAGGCATCCAGCATCCATTCGAAATGCGCA
CCTTGTGCGAGTGTCTCCGACAAAATCATCGGCGGCTGAAGGCGGTATCC
ATTGGACTTCTGTTGGATCCGAACGTACCCACATCCCATGAGGATATTCT
GGAGGTCTTCTGGCCACCTCGAGCGCAGGACGACTGCACGCCGGGCGAGC
GGGAATGGTTCCCATCTCTCACATCCTTGACATTCTCTCGCGTCCCGTTC
CCCGACAGTCTGCTGCCGGGCGGCCAACCGTCACCGTTCCGCGCGCTCAA
GGCACTAACGATCCGAGACTGTCCCAACGAGCAGCGCTTCCTGCAGCTGT
TGGCGCGAGCCAAGGATCCGTTGACCCTCCAGCACTTCGAGATCTGCAGT
GACTACCTGCGCGATTCAGAGGACCGATTGGCGTCCATTGCGATCGTCGA
ATTTCTACTCTCATTTCGTGGCTTGCGACGGCTGTACCTGAAGGTGGCCA
ACTTTCCCCGGTTCCTGCCGGGTCTTGGTGATGCCATCAAACATCACCAA
GCCACGCTCCACGGTCTGGTTTTTCACGAGCGTCGGCTGATGCCAATCGA
CGCTGAAAGGCTGTTTGAAGATCTTCGGGATGTGAATATGGCATCCCCCA
ATATTCCGCAAATTCTACGACATAGTTCCCCCGCCGCTCTTGGCCTCTGT
CTTCGCCCGGCCAGCGCGGTAAGTGTATCGTTAGCACCCATCCCCACGGC
TATATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012977KJC3_012977Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012977-T1KJC3_012977-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012977-T1.cdsKJC3_012977-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012977-T1.utr3p1KJC3_012977-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012977-T1.exon2KJC3_012977-T1.exon2Aspergillus niger KJC3exon
KJC3_012977-T1.exon1KJC3_012977-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012977-T1.utr5p2KJC3_012977-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012977-T1.utr5p1KJC3_012977-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC16FsupercontigJC16F:21122..23379 -
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