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KJC3_012978-T1, KJC3_012978-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012978-T1
Unique NameKJC3_012978-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC16F:131996..133187+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012978-T1 ID=KJC3_012978-T1|Name=KJC3_012978-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1192bp|location=Sequence derived from alignment at JC16F:131996..133187+ (Aspergillus niger KJC3)
CACCCCGCAATTTCCTCTCCCGGCCTCAATGTCTCCGCCATCATCTCGCA
GGAACCGCCTGTCCTACGATCATGACCGATGGCACCTAACTTACCCCAAT
CTACGCTTGACTTTATCCATGATATGATCGTCGATGGAGAGCTCTCTTTG
TCCCAAATGGCTGCAAATGCCGGCTGCAGCAAGCCTACAACCATTGCTAT
TCGCTCTAATCTTCGCATCTTCGGCAGTGTCAGAGCACCACCGGTCAAAG
GTGGACGTCCGCGGCGTCTTACAACGGTGATGATGGACGCCCTTTGTGAC
CACTTACTGGAAAAGCCTGGTCTATATCTCCACGAAATGCAGGTTTTTTT
GCTAGACGAATTCAGCCTGCATGTCTCAACTTCTACTATTAGCAATGCGC
TTCATCGCAAAGGATGGTCAAAAAGGATAGCGCGACAAAAAGCAAAAGAA
CGAAATTCCGATTTACGTGATGAATATTTCCACGATATTGCGGAATTCAG
ATCGTATCAGCTTATATTCGTTGACGAATCTGGATGTGATAAACGAATAG
GCTTTCGGAGAACAGGCTGGTCGCCCCTCTGTATAACCCCAGTCCAGGTA
TCAAAATTCCATCGCGATCAGCGGTACCAGATACTTCCAGCGTACACCCA
AGATGGTATTCTTCTTTCTCGTGTGTTCCAGGGCTCCACTGATGGCTTGT
GGTTTGAGGATTTTATTGAGGAACTTCTCCAGCATTGCCAACCATACCCG
GCCGCTAAGTCAATTATCGTCATGGATAATGCCTCTATTCATCGGTCTGG
ACGGATACAGGATATGTGTTTGAAAGTGGGCGTTAAATTGATATATTTAC
CACCATATTCGCCAGATTTGAATCCAATTGAAGAGTTCTTTGCCGAGCTA
AAAGGATTCATCCGACAACATTGGCAGACATATGAAGATAATCGCGACCA
GGGTTTTGCTTCCTTTCTTGAATGGTGTGTGGACAAGGTCGGTGCCAAAG
AACAGAGTGCTAGAGGGCATTTCAGGCACGCAGGTCTGACAATAGAAGAG
CCATAGCGTCTATCATGTAGTGAATCATCCGATAGCCCTTCCGGCAGTGT
CGCTACTTGCTTTCTCTGATCGTTTCCTGCAGCCCAGACCTCAAAATACG
CTAAGCTCGTTTTAGAACGGAACTTGAGAATAGCTAATCCGT
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Coding sequence (CDS) from alignment at JC16F:131996..133187+

>KJC3_012978-T1 ID=KJC3_012978-T1|Name=KJC3_012978-T1|organism=Aspergillus niger KJC3|type=CDS|length=978bp|location=Sequence derived from alignment at JC16F:131996..133187+ (Aspergillus niger KJC3)
ATGGCACCTAACTTACCCCAATCTACGCTTGACTTTATCCATGATATGAT
CGTCGATGGAGAGCTCTCTTTGTCCCAAATGGCTGCAAATGCCGGCTGCA
GCAAGCCTACAACCATTGCTATTCGCTCTAATCTTCGCATCTTCGGCAGT
GTCAGAGCACCACCGGTCAAAGGTGGACGTCCGCGGCGTCTTACAACGGT
GATGATGGACGCCCTTTGTGACCACTTACTGGAAAAGCCTGGTCTATATC
TCCACGAAATGCAGGTTTTTTTGCTAGACGAATTCAGCCTGCATGTCTCA
ACTTCTACTATTAGCAATGCGCTTCATCGCAAAGGATGGTCAAAAAGGAT
AGCGCGACAAAAAGCAAAAGAACGAAATTCCGATTTACGTGATGAATATT
TCCACGATATTGCGGAATTCAGATCGTATCAGCTTATATTCGTTGACGAA
TCTGGATGTGATAAACGAATAGGCTTTCGGAGAACAGGCTGGTCGCCCCT
CTGTATAACCCCAGTCCAGGTATCAAAATTCCATCGCGATCAGCGGTACC
AGATACTTCCAGCGTACACCCAAGATGGTATTCTTCTTTCTCGTGTGTTC
CAGGGCTCCACTGATGGCTTGTGGTTTGAGGATTTTATTGAGGAACTTCT
CCAGCATTGCCAACCATACCCGGCCGCTAAGTCAATTATCGTCATGGATA
ATGCCTCTATTCATCGGTCTGGACGGATACAGGATATGTGTTTGAAAGTG
GGCGTTAAATTGATATATTTACCACCATATTCGCCAGATTTGAATCCAAT
TGAAGAGTTCTTTGCCGAGCTAAAAGGATTCATCCGACAACATTGGCAGA
CATATGAAGATAATCGCGACCAGGGTTTTGCTTCCTTTCTTGAATGGTGT
GTGGACAAGGTCGGTGCCAAAGAACAGAGTGCTAGAGGGCATTTCAGGCA
CGCAGGTCTGACAATAGAAGAGCCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012978KJC3_012978Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012978-T1.utr5p1KJC3_012978-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012978-T1.exon1KJC3_012978-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012978-T1.cdsKJC3_012978-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012978-T1.utr3p1KJC3_012978-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012978-T1KJC3_012978-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR038717
DBxrefInterPro:IPR025959
DBxrefPFAM:PF13592
DBxrefPFAM:PF13358
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC16FsupercontigJC16F:131996..133187 +
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