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KJC3_012982-T1, KJC3_012982-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012982-T1
Unique NameKJC3_012982-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC17F:57015..59987-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012982-T1 ID=KJC3_012982-T1|Name=KJC3_012982-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2973bp|location=Sequence derived from alignment at JC17F:57015..59987- (Aspergillus niger KJC3)
CCTTCACATCTTCTGCAAATCCTTTTCTTGTACCCACAAAATTATCTGTT
TTGAGCACACACATGCACAAACTCCGACTTGCAGTTATTTTCCCACACTA
TCCATATTATCAATACCGTCTGGAGTCGTTACTGGGCTCACCTAACCAGG
CAGATCCCCTTTCCCGACAAAATAAAAGTACAAATATCCTTCCTAATGGA
CCCCCTCCAGCTCAAGAGTTACAGCACGGCCATGAGCCTGTATACCAAGA
GTCAAATGGCGAAGATGAAATTCAACTTGACCCCATGCCTAGCAAAAAAA
ATCACAGCGACAGCCCCTCAAGTGATCCGCGGGGGTAAAAGCTCCGCTAT
ATCATCGAGCATACAGCTTAACAAGCTCCAGCATGGACCCACTATGGCTG
CTGGAAGGCATCTCTGTAAGTGCTCTGAAAGAAATTGAGGCAACCGGCAT
ACTGCTGATGACAGGCCTATATAGCATTCTTACGCAATCAAGCCTTCCCT
AGTCGACGGTTATAGAATTTGGCGAACAGGTCTTGGAAGTCCCTCCTAAT
CAGCCATCAGAGGTGTAAGCGAACTTACTATTTGGTTTCTCCTTTCCGAA
GGTTCCTATTGCTTTGATCACACGACTCATCCTAGTTATAGAATACTTAG
ATGCTTGATCGTTTCACAAGTAGTCAGAATTCCATGCTAAATATAATGTG
TCTGGCTCGTTGGGGATTTGTACGAAGCTTCTAGCTAGTGTCAGTATTTG
ATGGGGCGGCCTAGATGACTATCGTATGTGGCGAGGGGTTGATTGTTCTC
CTATTGGGTGACCTACTTGTGGATTTGGATTTGTCTCATTTCCTTCGTGG
GACTAAGGCAATCAGTAGAACAGTACGCAGCCACCCTATCCTCTTAACTC
GATATGATACTCCCTTCTGTCAATTATTGCTACTCCTTCTATTTTTCAAT
CATTACATCGTCGTATGTGAGCGAACCAGGGTTAGGCTTCGAGGGCGGGA
TGAACAAGCCATTCTAGTTTCTCACGCAGGCGGTGTGGGCTCCCGGATTA
CTGATCTACGGCAGCTCCGACAACTGCCTCGTTCCGTTAGTCGAGTGGAA
GGTCCACGTTGCGGGGTACATCTCGTGTAGCAGTGAGAAGGACGTCAGCT
CTCGCCCCGAGTTTCGATGATTCTTCGACGAGTCTCGAAGATGGAACTCA
GCGACCTACCGCCAGAGATTATTTTGATAATCCTGGACTATTTGGAGACT
ACTGCAGCTTTGAAAGATATTTGCTTGGTATCAAAGAAATTCTGCGCCAT
CGCCCAGCCGCTTCTTTACCACGAGATTATCCTAGGCCCTGAAGATGTAC
TATTATCAATCCTCCTTCTCTGCCGCACCGTTACTACTTGCCCTCACATA
GCAGCGCATGTCCAACAACTTGATATTGATACCGACAATCCAGGCTTTCT
ACTGGCTGAGGGGGAAAATAATTCCAATGCTGTCAACCAAGATAAACTGC
CAGTAGCAGATATTCACCTCCTCGAAAAGGAAGCCCAGAATATCAATTTG
AGTGACATAGATGCATCTCGTTTTGGTACAGAAATCGGAGACTCCGTCAT
CTTTTCTATGTTGATAATCTCACGCACTCAGAATCTGAGGTCTTTGGTTA
TCACTCTTGACCCCCAAGGCCTATCCCTCTTGATTGGCTTAGCCCAAGGT
AGAATGAATGCGCATACATCGTTACCTTGCCGAAACAGCCTCGAAAGATT
GCACCTGCGCTGCCGGAAAGGCCGCTACAACGATAGAATGAATATGAATA
ATATTGCCCGGCTCCTTTCTCTGCTGCCTCTGAGAGAGATACAGATCAGC
GAATACTGTTCTGGTGGGCAAGCTTCACCCAAAACAGACGATGCAGATGT
TACTCCTCTCAGCTCCGTTTCTGCCTCGAGTCTTTCGCTCTGTGGCAGTT
CCATCGAGGAAACGGATATTGATGCGCTGGTCGGGTTATGCAAAAATCTG
ACCGCCTTTTACTGTGGGCAGTGCGGTTCTCATAATCATCAATTAAGTCC
TCAACGACTATACTTACTGCTCTTTTGCCGACGGGATAGCTTACGGGTTC
TCCAACTGTCATTTGGCGACCCGTTCGCCAATCCCCCAATTTTCAGAGAT
TCCCAATTCGGCGGCTCCCTTAAACAGTTCGTTGTCTTAGAGTACCTAAT
ACTCGATCAAGTGTATCTTAGCACTACACCTGAATTTCCATCCTCCTTGA
AACACCTTGCGATAAGGGAATGCCGATCACCAATAGCGCAATTATTGGCC
CATATAGCGGAGTGCGTGCTAAACGGCCAACTGCCGAATCTGCAATATAT
CTCTCTTCACAGCAATATTACCCATCCAGGCAGAATGATCAACTTACCGC
AGAGGGGTGCGACTGATATATTATTTAACAAGGCATGTCAAAATCTACAG
AATATTCTCGATGGAACGGAAATAACACTGCAACTCGAAAAAAACTTGCT
CGATAAAACCGTCCAAGGGTACGGCGCTGCGTATGAATTTGGTCAGCCCG
GTGTATTTTGGCCATTCATTTTTTTGGAATAAGAGAGGTAAATTCCATAC
GATCCGAACTTCTGATGCTGGCGTCACCTCTCTCCCTCAGCCAGACCGCG
CTCTTTGTACGGCTAGTTGTGCGGGAGCATGATGAGCTGACTGTTTGGGT
AATGAATGTTCCACTTTCGGGAGGATCATTGAGCGAATATGGCAAGCGCA
ACTGTCCTTTTCTTTGTTAATTTATGTTTTACGGAATTCAGTATATCTTG
GAAAAGGAGGGTCAAGAAGGGTTAGTGTTGTCGCTACTCGGATGTCCTGT
TGTATGGATGTCGAAGCTCGTAAATTCCTGTTTTATACGACGACTACTGT
AAGATAAGAAAGCAAATTGCTTCGTTTACAGTATTAATCAACGCTGCCAA
GAAGCTTTGGTATTAGACTAATG
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Coding sequence (CDS) from alignment at JC17F:57015..59987-

>KJC3_012982-T1 ID=KJC3_012982-T1|Name=KJC3_012982-T1|organism=Aspergillus niger KJC3|type=CDS|length=1416bp|location=Sequence derived from alignment at JC17F:57015..59987- (Aspergillus niger KJC3)
ATGATTCTTCGACGAGTCTCGAAGATGGAACTCAGCGACCTACCGCCAGA
GATTATTTTGATAATCCTGGACTATTTGGAGACTACTGCAGCTTTGAAAG
ATATTTGCTTGGTATCAAAGAAATTCTGCGCCATCGCCCAGCCGCTTCTT
TACCACGAGATTATCCTAGGCCCTGAAGATGTACTATTATCAATCCTCCT
TCTCTGCCGCACCGTTACTACTTGCCCTCACATAGCAGCGCATGTCCAAC
AACTTGATATTGATACCGACAATCCAGGCTTTCTACTGGCTGAGGGGGAA
AATAATTCCAATGCTGTCAACCAAGATAAACTGCCAGTAGCAGATATTCA
CCTCCTCGAAAAGGAAGCCCAGAATATCAATTTGAGTGACATAGATGCAT
CTCGTTTTGGTACAGAAATCGGAGACTCCGTCATCTTTTCTATGTTGATA
ATCTCACGCACTCAGAATCTGAGGTCTTTGGTTATCACTCTTGACCCCCA
AGGCCTATCCCTCTTGATTGGCTTAGCCCAAGGTAGAATGAATGCGCATA
CATCGTTACCTTGCCGAAACAGCCTCGAAAGATTGCACCTGCGCTGCCGG
AAAGGCCGCTACAACGATAGAATGAATATGAATAATATTGCCCGGCTCCT
TTCTCTGCTGCCTCTGAGAGAGATACAGATCAGCGAATACTGTTCTGGTG
GGCAAGCTTCACCCAAAACAGACGATGCAGATGTTACTCCTCTCAGCTCC
GTTTCTGCCTCGAGTCTTTCGCTCTGTGGCAGTTCCATCGAGGAAACGGA
TATTGATGCGCTGGTCGGGTTATGCAAAAATCTGACCGCCTTTTACTGTG
GGCAGTGCGGTTCTCATAATCATCAATTAAGTCCTCAACGACTATACTTA
CTGCTCTTTTGCCGACGGGATAGCTTACGGGTTCTCCAACTGTCATTTGG
CGACCCGTTCGCCAATCCCCCAATTTTCAGAGATTCCCAATTCGGCGGCT
CCCTTAAACAGTTCGTTGTCTTAGAGTACCTAATACTCGATCAAGTGTAT
CTTAGCACTACACCTGAATTTCCATCCTCCTTGAAACACCTTGCGATAAG
GGAATGCCGATCACCAATAGCGCAATTATTGGCCCATATAGCGGAGTGCG
TGCTAAACGGCCAACTGCCGAATCTGCAATATATCTCTCTTCACAGCAAT
ATTACCCATCCAGGCAGAATGATCAACTTACCGCAGAGGGGTGCGACTGA
TATATTATTTAACAAGGCATGTCAAAATCTACAGAATATTCTCGATGGAA
CGGAAATAACACTGCAACTCGAAAAAAACTTGCTCGATAAAACCGTCCAA
GGGTACGGCGCTGCGTATGAATTTGGTCAGCCCGGTGTATTTTGGCCATT
CATTTTTTTGGAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012982KJC3_012982Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012982-T1KJC3_012982-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012982-T1.cdsKJC3_012982-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012982-T1.utr3p1KJC3_012982-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012982-T1.exon3KJC3_012982-T1.exon3Aspergillus niger KJC3exon
KJC3_012982-T1.exon2KJC3_012982-T1.exon2Aspergillus niger KJC3exon
KJC3_012982-T1.exon1KJC3_012982-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012982-T1.utr5p3KJC3_012982-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_012982-T1.utr5p2KJC3_012982-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012982-T1.utr5p1KJC3_012982-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC17FsupercontigJC17F:57015..59987 -
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