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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC17F:102907..108450+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012984-T1 ID=KJC3_012984-T1|Name=KJC3_012984-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5544bp|location=Sequence derived from alignment at JC17F:102907..108450+ (Aspergillus niger KJC3)
TCTCAAGGCTCACCGCCAATGGCCTCTATCACGAGCAACGGGTAGGCGTT
GGTCCCCACTTGATGTTCATCCACTGACGAGAGACGCCCCACACTACTCG
GGACCCCAAGCGCTAGCATGGAACGAATTGGCTGCCAAGTGTAACGGCGA
GCCAAATCCACAGCAAGGAGGCACCCTCGCGGTGTAAAATAGACGGGGAA
TTACGGACTTTTCTCCACTTGTCGATGAGATCCAATGGGTAATGACTGTG
TGGTGTCGAACCCTCCGAGGCTAGATTATACAGTAGCGCCGTTACGCAAA
ATCAGCAGTCAATGAGAGAGGTAAGCCAACTCACTGTGTTTGGAAAGCGT
ATGTACTTGCTCACTAATTTCTTGATTGTACAATTTCATCTCAGCAAGAT
AGTACAATGGAAGCATCTTCTACAGTACCTATATAAACGGATTGTGAGTA
TCGAGAGTGATGCAACTGAAATAGTTGACTCCACTAGTTAAGGATTGGAA
GGGGCATCGAACTTTTCTAGCTACTACTACAGCAAATTTAGGTATCATCG
AACCAGCGCATTTTGCGGGGTCAACTGAGCCTAAACCGACGTATATTGCT
GCCTGAGGCACCGATGGACTCCGGCCGAAGGGGTGAGTAAGCTGGTAAAC
AACCCGACACGCAATTCTCTCCCGACTCTATTCCCCGCACCGGATAGAGC
CTCCTCCGCTGTTGAGTTGCTTTCGCTCGATTATCGGCCGAGCAACTCTT
TCGAAACGGGATGGAGGAAACAATAGCCGAATTACGACGTCAGATTGAAG
AACAACAAAGGCTGCGAGAAGCGGCAGAGCGCCGTGAGGAGGAGGAGAGA
AAGGCGCGAGAAGAGGCAGAACGCCGTGAGGAGGAGGAGAGACAGGCGCG
AGAAGCGGCAGAGCGCCGTGAGGAGGAAGAGAGACAGGCGCGAGAAGACG
CTGAACGTCGAGTGCAACCCAACTCCCTGTTTCGCCTCCTCGATCGCTGC
CACAATTCTCTCTCAAAAGCGATCCGAGTTGAGGTAGATGCCACCCTTAC
TACTCAGGGCGACGCGGCCGATCCAGTGAACCGAGTCTACCCCAAGCACA
TCATCCCTTGGCGTGCCTTCCCCCAACTACAGGAACAGATCTGGGACAAA
TTCGACCGTAATAATGCCTTTACCATGCGTCCACTATTCCCCTCTGATAC
CCAAATCGATTATGTCGTCACGAATATCCAGAACAGACCAATCTATTCGG
AAGCGTCTCTTCGGAATTTTGAGCGAGACACGGTGGACAACTTTGTTGAA
AAGGTCATTGAGGTTTTGCGAGACGATGAACCCCTTCGAGATGAGTTTGG
AATCCAAGGCCGAGTCACCTTCTATGATCGCGCAAACCCGTCGGAAACTT
CGCTCGAGAACAGCCTAGAGCAAATGAATCTCGAGGACGCGCGGACGCCC
CAACGACCGGCGAACACGAGGCGTGGAAGAGGCCGAGGACGAGGAAGAGG
AGCCGCGCGGAGACAGACGAGGGATGGCACTGCGCGACGACGCAATCGGC
GTGCCGACCAGTTCTGCGTGCACCTTGTGGCGGATGAACGGCAAATACCC
GTGTATGCAGTGGAGTTCAAAGCGCCACACAAAGTGACGATCCCCGAACT
GGTGGCGGGTCTACACCCGATAGATCTGGATCGCGATGTCATTGACCAAG
AGGGCGACACGTTTGCGTTTTATGCCACCCGCCTGGTCGCGGCCGTGGTC
ACTCAGATATTCTCATACATGATCGACAGTGGCGTTCGATACGGCTACAT
CTGCACCGGGGAGGCTTTTGTTTTCCTTCATATCCCAAAGGATAACCCCA
CCATTATTCAATATTTCTTGTGTATTCCTAATCAGGATGCGCAGGCGGAT
GTGCAGGCGGACGATGAAATGCGCCTCCACCGGACTGCCATCGGTCAGGT
GCTTGCGTTCACGCTTCAAGCGCTGGCCGTCGAACCACCGACTCAGAAAT
GGCACGATGTGGCACACGACCAGCTAACAACCTGGAAGGTCGAATATCTC
GACGTGTTGAGAGAAATCCCCGAGACTCTCCGTAAAGACCCGCCGGCGTC
TGATTATCGGCCCTCTCACTGGAAACCGGATCGGAAAATACACAACACAC
GCGCTCGCGCTCGCGCGCGTTGTCAACCGGGCGCATCGGCACCGAAGCAT
TCGTCCACTGAAGGCAGCGGCAGTGATCAAGAATCGCTTTCGCCAACCGC
CGCAGCCGCGTCGCGCATCCGATCGAGCCGCGGCCAAGGCAACCACCGCC
AATCAACCCGGGAAGGTGAAAGGCCACGAGCCGGCCGAGACCATAAACAG
ACCTCTCGGCAAGACGGACCTTCTACGCGACCATACTGCACCATTGCGTG
CATCCGCGGCTTGGCTAACCAAGAACCACTGGATAAGAATTGCCCCAACT
GGGAACTCCACGGTGGTCGGAGACACTCCATCGGACCGCAGGAGTTCACA
CGCCAGCTCCATCGTCAACTGGCCCGAGATCGGGAACTTGGATTCGAACA
GCTGCACGTTTGTGGTCGGACAGGATATCTCATCAAAGCCACCCTCCTTT
CCCGCGGATACACGGTGATCATGAAAGCAACGACTGTGGAGAAGCAGCAT
CGCCTTCGAACGGAAGTGGACAATTATCACCGGCTCCGGAACTTGCAGGG
ACAATACATCCCTGTCTGTCTTGGGGACTTTAAGCCTCGTGTTGCATATT
GGTACCACGGTAAGTTAATGGCGCAGATGATGATATTGAGCTGGTCTGGA
ACGCGGCTTCAGCATGCCATCAATGATGGGAACTCCCACTTCTTTCAGCA
AGAGCGCGACAAAGCTCTGACCGTGCTTCGGTCGCGTGGAGTCATCCACT
GCGACAGTGAGTGGCGTAATATGCTGTGGGATGACCTGAGTGGCCGCTTG
GCTGTCACCGACCTGGAGGATGTGAAATGGTTGAAGCGCGCTAGGGCCCT
TGAATCCGTCTCTGCGAATACACGGCGTACTCGCTGCGTCAGAGCGGTGA
AATATAAACCCGGCTTGGAAAGGGTGGAAAGGGTGGAAATTCCGCAACAC
GGCAGCACCTTAAGCTTGTAACAGTGTGTTCGGAAACGTTGCAAAGAATT
CCGCCACAAGACGTCGTGGCTTTAACTTACACCGAGTACTAAATACACAT
TTTGCAACACGAACCCTACATGTTGCAAGAGCGCGACTGCACAGCAGGCT
TGGGCGGCGGAATTATCTACACGAGCTTCCCAGGCTTTGCAGCTTGAGAT
ACATCCCATCAACCATCCCCCGTTGACCGGACTCCTTCGAAAATCTTTAT
TCGATTTCACAGCTAGCTCAAGTGCTTGGAGATTACTTGGAGGCATCCGC
CTCAGCAAGAGCATGTGCGATGGCCACGGTGTTTTTGATCTGGCTCAAGT
TAGCATGTGAGGGGTTGAACAGCAGCGCTCTGGTACCCACCCCGGCGTCC
ATTTAAAGCGAAAGACTATAATTGTCGAAGGTTGTTCCTCACCACAACAG
GTCCTTGCGTCGTACATGCCCTGGACAGAGTCGTTGACCAGATTTCTCTG
CGAACTGACTCCTTGATTTCTCATAGTCAATGGTCAAATGGGTCCGGGCG
AGAATTGCATCTTCAAACTAGATACCCCGATTCAACGTCAAGGAAATGCT
TCCTATTCCAGCTTCCGGAGGAAGATGGTCACAAGGGGATTTTGAGTATT
GGGATAAGATGCACGCTACTTCATGAACGTAGCAATCTTATCCAAGCGAA
GCATGCCACCAAAATGTGTGTCGATTTTGATTACTGCTTCAAGCTGTTGC
TCAAGCGAATTCAAATCGCCGTGGTCGACTCGGCGTTTTCACCAGTTACG
TTGTCGAACGGTACTCTCGGTATCAGACCCAGCGTGGTTTTCACCAATGA
CAAGAGCAAGGTCTTGGTTTCTGGAGGGAACTATAAGCACTTTACGATTC
GAGTGTTCAATGGGCAAGCGGAGTTGGTGATGTGAGATTGCGCAGTCTTG
GTTATTCACATTCTCCGCATATTGGTCGAGCTCTGCGAGAAACGAAAGAT
GACATATTGTTCAATCTAAAGATATCCCAGACTCTAGCGGGACCATCAAA
TGAAGGCTTTCCGGGGCCACCCTGATCTTCGCCTCTCCTGATAGTGTCGA
ACTGCGCAATGAAAATCATCTTCTGATATTTCTCCCATGATCGAATCCAT
GCTTCAGGTGTAGGCGATCATTGACAATGTTGGCAGGTACGTTGGCCAAG
GTCCCGCATACAAAAAGTGCTAGCCGACAGAATACTTCTCTAGTTTGCGA
ACTATTCAAGGCGAAAAATCTACTGGGCAGTTCTTCAGCTTTGCATCACA
CATCGCCCGAACGATAGCATCTGCATACAGCATGCAGGATCTGCGTCCGA
AGGAGGTGGAGTGAGAGCATGCTCGGGCTGTCAAGGCTCAACTATGGTCT
TTCTGTACACGCACTGAAGCCGACATTGGGTCCAATAACATTTCCGCTAT
CCATTACAGGATACATTTCTTTTCACGGACCTCGACGTCTAATTCGAGTG
TGGCCAATTCATCTTACTAAAGAGATTTTACAACCCTCCAACCGATAATC
CTTATCAACGAAACCACGACTCTTCGAAAGAACCATCCGCAATAAAATAA
TCGTCGGACTCGGCAATTCTGAGTTCACCGAGATCAATCTGATTCAAGCC
TGCGAGGACGCAGATATTCACGATCCCATTACCTGCCTCCCGGATGGATA
ATCGACCTATCGGACATCAAGGCTCAATCATTCCTAGGTGAAAGACAGCG
ATAACGCCCTGATTTCATGCAGGCATTAGTACGCAGACCATTCCTCTACT
CGACGAAGCGACATCGAATCAATCTTCACCCTAGTCCCAAGAAATGGTAC
AGGCAGTACTCAGGCGCTTGGCAGCGAAGAGATGTATGACGATTGTGGCA
GTTACGCATATACTGGCTACTGTACCGAAAGCGGACAGGGCATTTGTCTT
TGGTGTAAGCCAGAGCAGATATGGGTTCAGGTCGTGGAGCAGGAAGTCAT
CAGGAATTGCTACGGGACCACGAGATGTGTTGGCTGACAGTGAGTATTGA
CTTGATATTCTATGTAATGTGGTTGACTGATTAGTGTTAGGACAATGCGC
TCGATCGATAAATGTACACTACGTGATTTCATTCCGTATAGGTGTCAGTG
GGTTCAGAGAATTTATCTATTAGAAGTTGCTTCATCATACATACAATATG
ATGGATTGATAGGCAGATAAAGGAACACCCCTCCCCCTTTCTTATCTACT
TCCTGCCATTAAACTCCGGACGAGCCTCAGAGGCATACAACCGTCTCATT
CGTCCATCTGCTATCCAGAGCCAACCTCTACTTCCCATTATATCTAGTCA
GCTGCACACAGCTTTCTGCAACACTACGAAACTCGGTGCTACTTGCTCGT
TTTCTGCTGTTGGTAAAGTCTCATCTTCTCACCAGCCTGCGCCA back to topCoding sequence (CDS) from alignment at JC17F:102907..108450+ >KJC3_012984-T1 ID=KJC3_012984-T1|Name=KJC3_012984-T1|organism=Aspergillus niger KJC3|type=CDS|length=2361bp|location=Sequence derived from alignment at JC17F:102907..108450+ (Aspergillus niger KJC3)
ATGGAGGAAACAATAGCCGAATTACGACGTCAGATTGAAGAACAACAAAG
GCTGCGAGAAGCGGCAGAGCGCCGTGAGGAGGAGGAGAGAAAGGCGCGAG
AAGAGGCAGAACGCCGTGAGGAGGAGGAGAGACAGGCGCGAGAAGCGGCA
GAGCGCCGTGAGGAGGAAGAGAGACAGGCGCGAGAAGACGCTGAACGTCG
AGTGCAACCCAACTCCCTGTTTCGCCTCCTCGATCGCTGCCACAATTCTC
TCTCAAAAGCGATCCGAGTTGAGGTAGATGCCACCCTTACTACTCAGGGC
GACGCGGCCGATCCAGTGAACCGAGTCTACCCCAAGCACATCATCCCTTG
GCGTGCCTTCCCCCAACTACAGGAACAGATCTGGGACAAATTCGACCGTA
ATAATGCCTTTACCATGCGTCCACTATTCCCCTCTGATACCCAAATCGAT
TATGTCGTCACGAATATCCAGAACAGACCAATCTATTCGGAAGCGTCTCT
TCGGAATTTTGAGCGAGACACGGTGGACAACTTTGTTGAAAAGGTCATTG
AGGTTTTGCGAGACGATGAACCCCTTCGAGATGAGTTTGGAATCCAAGGC
CGAGTCACCTTCTATGATCGCGCAAACCCGTCGGAAACTTCGCTCGAGAA
CAGCCTAGAGCAAATGAATCTCGAGGACGCGCGGACGCCCCAACGACCGG
CGAACACGAGGCGTGGAAGAGGCCGAGGACGAGGAAGAGGAGCCGCGCGG
AGACAGACGAGGGATGGCACTGCGCGACGACGCAATCGGCGTGCCGACCA
GTTCTGCGTGCACCTTGTGGCGGATGAACGGCAAATACCCGTGTATGCAG
TGGAGTTCAAAGCGCCACACAAAGTGACGATCCCCGAACTGGTGGCGGGT
CTACACCCGATAGATCTGGATCGCGATGTCATTGACCAAGAGGGCGACAC
GTTTGCGTTTTATGCCACCCGCCTGGTCGCGGCCGTGGTCACTCAGATAT
TCTCATACATGATCGACAGTGGCGTTCGATACGGCTACATCTGCACCGGG
GAGGCTTTTGTTTTCCTTCATATCCCAAAGGATAACCCCACCATTATTCA
ATATTTCTTGTGTATTCCTAATCAGGATGCGCAGGCGGATGTGCAGGCGG
ACGATGAAATGCGCCTCCACCGGACTGCCATCGGTCAGGTGCTTGCGTTC
ACGCTTCAAGCGCTGGCCGTCGAACCACCGACTCAGAAATGGCACGATGT
GGCACACGACCAGCTAACAACCTGGAAGGTCGAATATCTCGACGTGTTGA
GAGAAATCCCCGAGACTCTCCGTAAAGACCCGCCGGCGTCTGATTATCGG
CCCTCTCACTGGAAACCGGATCGGAAAATACACAACACACGCGCTCGCGC
TCGCGCGCGTTGTCAACCGGGCGCATCGGCACCGAAGCATTCGTCCACTG
AAGGCAGCGGCAGTGATCAAGAATCGCTTTCGCCAACCGCCGCAGCCGCG
TCGCGCATCCGATCGAGCCGCGGCCAAGGCAACCACCGCCAATCAACCCG
GGAAGGTGAAAGGCCACGAGCCGGCCGAGACCATAAACAGACCTCTCGGC
AAGACGGACCTTCTACGCGACCATACTGCACCATTGCGTGCATCCGCGGC
TTGGCTAACCAAGAACCACTGGATAAGAATTGCCCCAACTGGGAACTCCA
CGGTGGTCGGAGACACTCCATCGGACCGCAGGAGTTCACACGCCAGCTCC
ATCGTCAACTGGCCCGAGATCGGGAACTTGGATTCGAACAGCTGCACGTT
TGTGGTCGGACAGGATATCTCATCAAAGCCACCCTCCTTTCCCGCGGATA
CACGGTGATCATGAAAGCAACGACTGTGGAGAAGCAGCATCGCCTTCGAA
CGGAAGTGGACAATTATCACCGGCTCCGGAACTTGCAGGGACAATACATC
CCTGTCTGTCTTGGGGACTTTAAGCCTCGTGTTGCATATTGGTACCACGG
TAAGTTAATGGCGCAGATGATGATATTGAGCTGGTCTGGAACGCGGCTTC
AGCATGCCATCAATGATGGGAACTCCCACTTCTTTCAGCAAGAGCGCGAC
AAAGCTCTGACCGTGCTTCGGTCGCGTGGAGTCATCCACTGCGACAGTGA
GTGGCGTAATATGCTGTGGGATGACCTGAGTGGCCGCTTGGCTGTCACCG
ACCTGGAGGATGTGAAATGGTTGAAGCGCGCTAGGGCCCTTGAATCCGTC
TCTGCGAATACACGGCGTACTCGCTGCGTCAGAGCGGTGAAATATAAACC
CGGCTTGGAAAGGGTGGAAAGGGTGGAAATTCCGCAACACGGCAGCACCT
TAAGCTTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC17F | supercontig | JC17F:102907..108450 + |
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