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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC17F:121802..123002+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012985-T1 ID=KJC3_012985-T1|Name=KJC3_012985-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1201bp|location=Sequence derived from alignment at JC17F:121802..123002+ (Aspergillus niger KJC3)
CAATACTTGAACTTCTCCTCCATACAGAAAGGCATCGATCCTAATCTATT
GGTAAATTCTTAGCGGGAATATACCTACTAATACTCGTGATACGATGGAG
GCGCCATCAACATCTACGACAGACCTTCAGGATGCTAAGACCGGACCATG
TACCATTGATGGCACGACTACTTCAACGTCCCGCACTTTGCTTGTTGGAG
AGGTACAGTGCAATGAGACACATGCAAATGCTGGTAAGGTATATACCCTC
GGCATCTATAAGACCATATCCACTGATGGAGCACAAAGGAAACTCGACAT
ACGTTGAAATAGAAGCCCGCTTGATAACCATGGTTAAAGATATGCTGCAA
TGTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGCCAAAACCCCCGAAAG
ATATGCCAGGGCGATTTTATTCTTTACCAAGGGCTGCACTGAGAATCCCA
AGGATATTGTTGGCAATGCTATCTTCACAGTCGATAGCCGGGAGCTTGTG
CTGGTCAAAGATATAGAGATATCTAGCCTCTGCGAGCATCACCTGATGCC
ATTTGTCGGAAAGGTATGACATAGTTTGTGTGGCTGGGAGCTTCGATTTA
CTCATTGTTTTTTAAAGATCCACATAGGTTATATTCCCGATGGCCGTGTG
CTTGGTCTCTCTAAGCTCGCTCGCTTGGCAGAAATTTTTGCTCAGCGCTT
ACAACTCCAAGAGAGGCTCACGCAACAGATTGCCAATGCCATTCAGCAGA
TTCTTGAGCCTCAGGGGGTTGGTGTGATCATGGAAGCAAGCCACATGTGC
ATGGTCACACGAGGCACTCAAAAATTCGCCGCCATGACGACAACCTGCTG
TATGACCGGCGTATTGCAGCGTGACGGCAGAGCCAGGGATAACTTCTACT
TCCTTCTCAATCGGCGATCCAGCTCGTGAAGGCTCAGTGGGTTGTCATTG
TGTAGTTGGATTCTGAAACGAAAATGAAGCAAAGGCGTCTAGTCCCACTC
GTCCGCTGAGCTAATAATTAACTGGACAAGCTTGTAACTTGCTCTTCGGT
TTATCCAAGACATGAACTACGTGGAGGGCTAATCCGCTATGGGCTGAGGT
GCATGCACGATATTACTTTTATTTTGCATTTCAACTGAGTTGGGGTTTAG
TTTGCTTGACCGATAATGTAGATTGGAAAGGGCCCATCTACCATATATGA
C back to topCoding sequence (CDS) from alignment at JC17F:121802..123002+ >KJC3_012985-T1 ID=KJC3_012985-T1|Name=KJC3_012985-T1|organism=Aspergillus niger KJC3|type=CDS|length=2178bp|location=Sequence derived from alignment at JC17F:121802..123002+ (Aspergillus niger KJC3)
ATGGAGGCGCCATCAACATCTACGACAGACCTTCAGGATGCTAAGACCGG
ACCATGTACCATTGATGGCACGACTACTTCAACGTCCCGCACTTTGCTTG
TTGGAGAGGTACAGTGCAATGAGACACATGCAAATGCTGGAAACTCGACA
TACGTTGAAATAGAAGCCCGCTTGATAACCATGGTTAAAGATATGCTGCA
ATGTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGCCAAAACCCCCGAAA
GATATGCCAGGGCGATTTTATTCTTTACCAAGGGCTGCACTGAGAATCCC
AAGGATATTGTTGGCAATGCTATCTTCACAGTCGATAGCCGGGAGCTTGT
GCTGGTCAAAGATATAGAGATATCTAGCCTCTGCGAGCATCACCTGATGC
CATTTGTCGGAAAGATCCACATAGGTTATATTCCCGATGGCCGTGTGCTT
GGTCTCTCTAAGCTCGCTCGCTTGGCAGAAATTTTTGCTCAGCGCTTACA
ACTCCAAGAGAGGCTCACGCAACAGATTGCCAATGCCATTCAGCAGATTC
TTGAGCCTCAGGGGGTTGGTGTGATCATGGAAGCAAGCCACATGTGCATG
GTCACACGAGGCACTCAAAAATTCGCCGCCATGACGACAACCTGCTGTAT
GACCGGCGTATTGCAGCGTGACGGCAGAGCCAGGGATAACTTCTACTTCC
TTCTCAATCGGCGATCCAGCTCGTGAATGGAGGCGCCATCAACATCTACG
ACAGACCTTCAGGATGCTAAGACCGGACCATGTACCATTGATGGCACGAC
TACTTCAACGTCCCGCACTTTGCTTGTTGGAGAGGTACAGTGCAATGAGA
CACATGCAAATGCTGGAAACTCGACATACGTTGAAATAGAAGCCCGCTTG
ATAACCATGGTTAAAGATATGCTGCAATGTCTCGGAGAAGACCCAACCCG
TGAAGGCCTCGCCAAAACCCCCGAAAGATATGCCAGGGCGATTTTATTCT
TTACCAAGGGCTGCACTGAGAATCCCAAGGATATTGTTGGCAATGCTATC
TTCACAGTCGATAGCCGGGAGCTTGTGCTGGTCAAAGATATAGAGATATC
TAGCCTCTGCGAGCATCACCTGATGCCATTTGTCGGAAAGATCCACATAG
GTTATATTCCCGATGGCCGTGTGCTTGGTCTCTCTAAGCTCGCTCGCTTG
GCAGAAATTTTTGCTCAGCGCTTACAACTCCAAGAGAGGCTCACGCAACA
GATTGCCAATGCCATTCAGCAGATTCTTGAGCCTCAGGGGGTTGGTGTGA
TCATGGAAGCAAGCCACATGTGCATGGTCACACGAGGCACTCAAAAATTC
GCCGCCATGACGACAACCTGCTGTATGACCGGCGTATTGCAGCGTGACGG
CAGAGCCAGGGATAACTTCTACTTCCTTCTCAATCGGCGATCCAGCTCGT
GAATGGAGGCGCCATCAACATCTACGACAGACCTTCAGGATGCTAAGACC
GGACCATGTACCATTGATGGCACGACTACTTCAACGTCCCGCACTTTGCT
TGTTGGAGAGGTACAGTGCAATGAGACACATGCAAATGCTGGAAACTCGA
CATACGTTGAAATAGAAGCCCGCTTGATAACCATGGTTAAAGATATGCTG
CAATGTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGCCAAAACCCCCGA
AAGATATGCCAGGGCGATTTTATTCTTTACCAAGGGCTGCACTGAGAATC
CCAAGGATATTGTTGGCAATGCTATCTTCACAGTCGATAGCCGGGAGCTT
GTGCTGGTCAAAGATATAGAGATATCTAGCCTCTGCGAGCATCACCTGAT
GCCATTTGTCGGAAAGATCCACATAGGTTATATTCCCGATGGCCGTGTGC
TTGGTCTCTCTAAGCTCGCTCGCTTGGCAGAAATTTTTGCTCAGCGCTTA
CAACTCCAAGAGAGGCTCACGCAACAGATTGCCAATGCCATTCAGCAGAT
TCTTGAGCCTCAGGGGGTTGGTGTGATCATGGAAGCAAGCCACATGTGCA
TGGTCACACGAGGCACTCAAAAATTCGCCGCCATGACGACAACCTGCTGT
ATGACCGGCGTATTGCAGCGTGACGGCAGAGCCAGGGATAACTTCTACTT
CCTTCTCAATCGGCGATCCAGCTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0046654 | tetrahydrofolate biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003934 | GTP cyclohydrolase I activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012985-T1.utr5p1 | KJC3_012985-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012985-T1.utr3p1 | KJC3_012985-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018234 |
| DBxref | InterPro:IPR043133 |
| DBxref | InterPro:IPR020602 |
| DBxref | InterPro:IPR043134 |
| DBxref | InterPro:IPR001474 |
| DBxref | PFAM:PF01227 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC17F | supercontig | JC17F:121802..123002 + |
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