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KJC3_012986-T1, KJC3_012986-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012986-T1
Unique NameKJC3_012986-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC18F:1668..3178-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012986-T1 ID=KJC3_012986-T1|Name=KJC3_012986-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1511bp|location=Sequence derived from alignment at JC18F:1668..3178- (Aspergillus niger KJC3)
GTCAGAACAGCAAAAGGCTCTGGGTGGCCCCCCGTAGATCTTTGGTCGGT
CACAGTCACAGTCGATCGACTTCCCTCCTACTCTCCGTCACCGACGGCAG
TTGACCATGCCGAGCGGCGAACATTATCCAATCTCAGCCGATTAATATAA
AGATACCCCATCACTCATGGAGGGTCTTTTCCATTCCACGTTGACACAGT
TGAATGGAGAGCGATGATATGATGCCAAGTGCTGGCCAGCGTCCTACAGA
CCCGGACATCCTTGTCGTGGAGGCGTGGGGACAAGAATTCCTGGTGGGCT
CCCTTATTGTCATGATTGCCATCACCGCGGCCAACATGAAAAAGGGGTGC
TCCTGCACAGACTCATCGTGGCAGAGGTAAGTTGTGCTGCCTCGTTGCGG
CGAATGGGGCACTATCCCCTGCTGATGTGGACGCTTAGCTCGCCCTGGCC
CTCGGGCATGGAACGTTCATCTTTCTCCATGCGCCTGCGTATGGCTGGTT
TCTCTCGGTCACGGCCGTGGGTCTTACAATTTCGCACACCCTCCACAACG
TGATTGCATGGATGAAGATTCGCGGCTTTTTCCCACCCTGGGGCACGCGA
CTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAAAT
CTATGCCAATTTTACCTTTTTCAATCGCGGCCAGGCCTTGTACTCCGCCA
CTCGGCCACTCGAGCCGCTTTTCCGGTGCGGTGTTCGAGCGCAATTCTTT
CCACGCCCGGCGTTGCTGATCCGAATTTAGGGACCCTTGGTGGATCTTCA
CCACCTGCTTTCTCCTGTACATCATCCAGCGTGGGTATAGGTGTTCGCTG
ATGCAGCTGATCCGCATCAGCCCGCGGTTCGGCGTCATGCTCTTGTTCAT
GGTGATCTCCGTTGTATTTGCGGTGGTGGACATGTGTGCGATCCGGGTCG
AGAATCGCCTAGGTTACCCCCCGGGCATGGAGCCGTTCTGGAAGGTAAAC
AGCCGCCACTGACGAGAAAAAGATCAGCATGCTGACCCTGCTGTAGTTAG
CGTTTGTTTTCAAGTGCCTGAGCGACACCATCATCTTGGATGACTTCCGG
AGCGCCCTGAACCGACTGCGCTATCACTATCACCCGGACGCGCCCCCACC
GCAGGAGACCACGCACGCTCGTGGTCGAAGCACAAATAGGCTTGTGGACT
GTGTGCCCGAGGCATCTATCAAACGCCCTGATCCAGTATGTCGTCCACCT
GACATGGTGTAAAGCCTGGAGTATCGTGTGTCGGCGCCAACGCGCACGGC
ACAGGCTGAATATAAATGCTGGATCTGCTAGGTACATAGCCGCTACGCAT
GGGAAGGGGCGCGACACACGTCCGTGACACATCCTCGCGTCTTTGTCTGG
CGGACATGATGGAGACCCACTTCACCGAACCGCTGGAGTTTAAATGATCA
CCTGTGCGGCTGATTCGTTCAACAACCAACGCCACCGACGATCAAATGCA
GCTACGGGGTG
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Coding sequence (CDS) from alignment at JC18F:1668..3178-

>KJC3_012986-T1 ID=KJC3_012986-T1|Name=KJC3_012986-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at JC18F:1668..3178- (Aspergillus niger KJC3)
TTAGCGTTTGTTTTCAAGTGCCTGAGCGACACCATCATCTTGGATGACTT
CCGGAGCGCCCTGAACCGACTGCGCTATCACTATCACCCGGACGCGCCCC
CACCGCAGGAGACCACGCACGCTCGTGGTCGAAGCACAAATAGGCTTGTG
GACTGTGTGCCCGAGGCATCTATCAAACGCCCTGATCCAGTATGTCGTCC
ACCTGACATGGTGTAAGGACCCTTGGTGGATCTTCACCACCTGCTTTCTC
CTGTACATCATCCAGCGTGGGTATAGGTGTTCGCTGATGCAGCTGATCCG
CATCAGCCCGCGGTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCGTTG
TATTTGCGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGT
TACCCCCCGGGCATGGAGCCGTTCTGGAAGATGAAGATTCGCGGCTTTTT
CCCACCCTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGC
CGTACTGGGTCGTCGAAATCTATGCCAATTTTACCTTTTTCAATCGCGGC
CAGGCCTTGTACTCCGCCACTCGGCCACTCGAGCCGCTTTTCCGTTAGCG
TTTGTTTTCAAGTGCCTGAGCGACACCATCATCTTGGATGACTTCCGGAG
CGCCCTGAACCGACTGCGCTATCACTATCACCCGGACGCGCCCCCACCGC
AGGAGACCACGCACGCTCGTGGTCGAAGCACAAATAGGCTTGTGGACTGT
GTGCCCGAGGCATCTATCAAACGCCCTGATCCAGTATGTCGTCCACCTGA
CATGGTGTAAGGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTAC
ATCATCCAGCGTGGGTATAGGTGTTCGCTGATGCAGCTGATCCGCATCAG
CCCGCGGTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCGTTGTATTTG
CGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGTTACCCC
CCGGGCATGGAGCCGTTCTGGAAGATGAAGATTCGCGGCTTTTTCCCACC
CTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACT
GGGTCGTCGAAATCTATGCCAATTTTACCTTTTTCAATCGCGGCCAGGCC
TTGTACTCCGCCACTCGGCCACTCGAGCCGCTTTTCCGTTAGCGTTTGTT
TTCAAGTGCCTGAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCT
GAACCGACTGCGCTATCACTATCACCCGGACGCGCCCCCACCGCAGGAGA
CCACGCACGCTCGTGGTCGAAGCACAAATAGGCTTGTGGACTGTGTGCCC
GAGGCATCTATCAAACGCCCTGATCCAGTATGTCGTCCACCTGACATGGT
GTAAGGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACATCATC
CAGCGTGGGTATAGGTGTTCGCTGATGCAGCTGATCCGCATCAGCCCGCG
GTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCGTTGTATTTGCGGTGG
TGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGTTACCCCCCGGGC
ATGGAGCCGTTCTGGAAGATGAAGATTCGCGGCTTTTTCCCACCCTGGGG
CACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCG
TCGAAATCTATGCCAATTTTACCTTTTTCAATCGCGGCCAGGCCTTGTAC
TCCGCCACTCGGCCACTCGAGCCGCTTTTCCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012986KJC3_012986Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012986-T1KJC3_012986-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012986-T1.cdsKJC3_012986-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012986-T1.utr3p1KJC3_012986-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012986-T1.exon3KJC3_012986-T1.exon3Aspergillus niger KJC3exon
KJC3_012986-T1.exon2KJC3_012986-T1.exon2Aspergillus niger KJC3exon
KJC3_012986-T1.exon1KJC3_012986-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012986-T1.utr5p1KJC3_012986-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC18FsupercontigJC18F:1668..3178 -
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