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KJC3_012990-T1, KJC3_012990-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012990-T1
Unique NameKJC3_012990-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC18F:34746..37098+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012990-T1 ID=KJC3_012990-T1|Name=KJC3_012990-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2353bp|location=Sequence derived from alignment at JC18F:34746..37098+ (Aspergillus niger KJC3)
TGTGTCTATTACCATTTGAGATTATTGATGCCATCGCTGATATGGTACTG
TAGATATACTATCTGGGTTTGGCCAACTGCTAACTGCATGCCAGCTGCCA
CAGCACAGCGTTCGGTCCTTGAGTTTGGTTTCCACCAGATTATATGCCGC
CCTGTTCCCGCGGCTTCATCGAACCATCACCTTCCGTGCGAGGAATGAAT
GGGCTTTGAACATTTTCGATGTCCATCCCTTTTTTCGGGACCACTCCGGC
TCCCGCGCCGGCGAAATCCTCCAGCATGCCCGGCAGATAAGGTTCAGCGC
TCCTATTCACATTGCTAGGTTCCACCGTTGTGTATACAACAGTCACTTTT
TCCTACCTGCCTCGTCCCACAACCGACCTACACTTGGAAGCCCGCACGAG
TCGACAGCCCATCAAGCCTTTCTCAATGATTTGTCTTACCAGATAGATCA
GGTCTTTGCGGGACTGGAGACCGTCTCCATCCGCTCGTTTCAGTATGTAT
GAAAGGCATGAGCCGCTGGACTCGCAACTGACGAGCCGCATGTGGTGCGT
AGGGACCTGCCTTCCGGCCGGAATTCTGGACACCAACGGATACCTGGTCC
GCCACCAGCAACAGATCCACTCGCTTTGCTTGATCACCGACGGCACCTGT
CCGCATGCCGGCCGTCGTCTAGAGGGCCTGTCGAGTTTGACGGCACTGAC
TGACCTGGAATGGGAAGGCATCCAGCATCCATTCGAAATGCGCACCTTGT
GCGAGTGTCTCAGACAAAATCATTGGCGGCTGAAGGCGGTATCCATTGGA
CTTCTGTTGGATCCGAACGTACCCACATCCCATGAGGATATTCTGAAGGT
CTTCTGGCCACCTCGAGGGCAGGACGACTGCACGCCGGGCGAGGAGGAAT
GGTTCCCATCTCTCACATCCATGACATTCTCTCGCGTCCCGTTCCCCGAC
AGTCTGCTGCCGGGCGGCCAACCGTCACCGTTCCGCGCGCTCAAGGCACT
AACGATCCGAGACTGCCCCAACGAGCAGCGCTTCCTGCAGCTGTTGGCGC
GAGCCAAGGATCCGTTGTCCCTCCAGCACTTCGAGATCTGCAGTGACTAC
CTGCGCGATTCAGAAGACCGATTGGCGTCCATTGCGATCGTCGAATTTCT
ACTCTCATTTCGTGGCTTGCGACGGCTGTACCTGAAGGTGGCCAACTTTC
CCCGGTTCCTGCCGGGTCTTGGTGATGCCATCAAACATCACCAAGCCACG
CTCCACGGTCTGGTTTTTCACGAGCGTCGGCTGATGCCAATCGGCGCTGA
AAGGCTGTTTGAAGATCTTCGCGATGTGAATATGGCATCCCCCAATATCC
CGCAAATTCTACGGCATAGTTCCCCCGCCGCTCTTGGCCTCTGTCTTCGC
CCGACCAGCGCGGTAAGTGTATCGTTAGCACCCATCCCCACGGCTATATG
AGCTGACTCACTGTAGCGAGGTCTTCTCTTAGACATCCCGGAACGCTCGA
CAATAAGATTACTCCACCTCCGGTTAAGCGGAGAGGAGAGGAACCATCGG
CATCTCCGCAGAGAGATCGTCTCAGAGCTGCGGAGAAATGCGGAAGGGAG
GCTATGGTCCAGGTCGAGACATGGACCAACAGTCGCAGGCTTCCACCTCA
AGCCCGCTCGGAAACGGTCGGAAGCCCAAGATTTCCTCCTGCTTGCTCAG
TGGGCTTTTGGACCTACAGGACTTCCTGCCTTGCAGATACTCGCCTTCGG
TGACTTTTCGCACGATGGCCGCTATAGAGAACAACAGATCTTGATTCGGC
GGAGGAGGATCGGTGAGCAGCCTTACCCGAGAGTTTCATCGGACAGGGAA
TACAGCATAAGCTCATCGTTTTGCCTGATCGATAGCGACGACCATTCTCT
CTGGGAGGGCCTGCCATTGGATGGGACTCAGTTTCTGTCTGCATGTCCTG
GCACGGGGTTGATGGAGTCCCCCTACGACCTTTAGCATGGTATCTTTGGA
GTTCCTTATAATTGGCGTTTTTACATTCGCGCGTTACAAGGGCGGCAATC
TGTTGTAGATTGCGCTTTTGATATAATCGCCGCCGAAATATGCCTTTGGC
AGTTGTTACTTACTAGTTGTGCGCCGACAGCGCCATTGTGGGAGGCTAGG
GGGCGCGATCCTACTTGCTTTATCTCTCACCGCCTGCTGCCTGGGCTGGG
AAGGCTTCCAGCACTGCTAACAGTTGGCTATACTGGGATTTTCCTTAACA
GTAGGCTCTCCTTTCTAGGGACGCAGACATCCAGGTTTCCCTGTGGCTTA
TGGCACGCATATCGAGAGAATAGTCGTACTGTAGCTAGTTATAAGACTCT
GTG
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Coding sequence (CDS) from alignment at JC18F:34746..37098+

>KJC3_012990-T1 ID=KJC3_012990-T1|Name=KJC3_012990-T1|organism=Aspergillus niger KJC3|type=CDS|length=957bp|location=Sequence derived from alignment at JC18F:34746..37098+ (Aspergillus niger KJC3)
ATGTATGAAAGGCATGAGCCGCTGGACTCGCAACTGACGAGCCGCATGTG
GTGCGTAGGGACCTGCCTTCCGGCCGGAATTCTGGACACCAACGGATACC
TGGTCCGCCACCAGCAACAGATCCACTCGCTTTGCTTGATCACCGACGGC
ACCTGTCCGCATGCCGGCCGTCGTCTAGAGGGCCTGTCGAGTTTGACGGC
ACTGACTGACCTGGAATGGGAAGGCATCCAGCATCCATTCGAAATGCGCA
CCTTGTGCGAGTGTCTCAGACAAAATCATTGGCGGCTGAAGGCGGTATCC
ATTGGACTTCTGTTGGATCCGAACGTACCCACATCCCATGAGGATATTCT
GAAGGTCTTCTGGCCACCTCGAGGGCAGGACGACTGCACGCCGGGCGAGG
AGGAATGGTTCCCATCTCTCACATCCATGACATTCTCTCGCGTCCCGTTC
CCCGACAGTCTGCTGCCGGGCGGCCAACCGTCACCGTTCCGCGCGCTCAA
GGCACTAACGATCCGAGACTGCCCCAACGAGCAGCGCTTCCTGCAGCTGT
TGGCGCGAGCCAAGGATCCGTTGTCCCTCCAGCACTTCGAGATCTGCAGT
GACTACCTGCGCGATTCAGAAGACCGATTGGCGTCCATTGCGATCGTCGA
ATTTCTACTCTCATTTCGTGGCTTGCGACGGCTGTACCTGAAGGTGGCCA
ACTTTCCCCGGTTCCTGCCGGGTCTTGGTGATGCCATCAAACATCACCAA
GCCACGCTCCACGGTCTGGTTTTTCACGAGCGTCGGCTGATGCCAATCGG
CGCTGAAAGGCTGTTTGAAGATCTTCGCGATGTGAATATGGCATCCCCCA
ATATCCCGCAAATTCTACGGCATAGTTCCCCCGCCGCTCTTGGCCTCTGT
CTTCGCCCGACCAGCGCGGTAAGTGTATCGTTAGCACCCATCCCCACGGC
TATATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012990KJC3_012990Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012990-T1KJC3_012990-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012990-T1.utr5p1KJC3_012990-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012990-T1.exon1KJC3_012990-T1.exon1Aspergillus niger KJC3exon
KJC3_012990-T1.exon2KJC3_012990-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012990-T1.cdsKJC3_012990-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012990-T1.utr3p1KJC3_012990-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_012990-T1.utr3p2KJC3_012990-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC18FsupercontigJC18F:34746..37098 +
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